EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024854 (Gene tree)
Gene ID: 108270958
Gene Symbol: mrpl54
Alias: si:dkeyp-70f9.5
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 2138 bases
Position: chr10:13685749-13687886
Accession: 108270958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037128	Ribosomal_L37	PF08561.10	6.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038575	-	1625	XM_017478021	ENSIPUP00000037128	139 (aa)	XP_017333510	A0A2D0RU70

Gene Model

Click here to download ENSIPUG00000024854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024854	mrpl54	95	52.593	ENSG00000183617	MRPL54	64	61.364	Homo_sapiens
ENSIPUG00000024854	mrpl54	96	62.406	ENSAPOG00000022643	mrpl54	64	72.727	Acanthochromis_polyacanthus
ENSIPUG00000024854	mrpl54	75	58.879	ENSAMEG00000005908	MRPL54	64	61.364	Ailuropoda_melanoleuca
ENSIPUG00000024854	mrpl54	89	67.200	ENSACIG00000006438	mrpl54	64	76.136	Amphilophus_citrinellus
ENSIPUG00000024854	mrpl54	60	74.699	ENSAOCG00000006430	mrpl54	64	72.727	Amphiprion_ocellaris
ENSIPUG00000024854	mrpl54	60	74.699	ENSAPEG00000023406	mrpl54	64	72.727	Amphiprion_percula
ENSIPUG00000024854	mrpl54	87	64.463	ENSATEG00000004969	mrpl54	63	68.966	Anabas_testudineus
ENSIPUG00000024854	mrpl54	73	58.824	ENSACAG00000017747	-	80	58.140	Anolis_carolinensis
ENSIPUG00000024854	mrpl54	75	65.421	ENSANAG00000028692	MRPL54	64	64.773	Aotus_nancymaae
ENSIPUG00000024854	mrpl54	76	78.095	ENSACLG00000001877	mrpl54	64	77.273	Astatotilapia_calliptera
ENSIPUG00000024854	mrpl54	99	61.151	ENSAMXG00000018143	mrpl54	97	65.468	Astyanax_mexicanus
ENSIPUG00000024854	mrpl54	78	54.464	ENSBTAG00000008396	MRPL54	63	62.069	Bos_taurus
ENSIPUG00000024854	mrpl54	55	42.500	WBGene00009128	mrpl-54	59	42.500	Caenorhabditis_elegans
ENSIPUG00000024854	mrpl54	75	65.421	ENSCJAG00000014998	MRPL54	64	64.773	Callithrix_jacchus
ENSIPUG00000024854	mrpl54	95	48.148	ENSCAFG00000019192	MRPL54	64	59.091	Canis_familiaris
ENSIPUG00000024854	mrpl54	95	48.148	ENSCAFG00020018333	MRPL54	64	59.091	Canis_lupus_dingo
ENSIPUG00000024854	mrpl54	76	55.046	ENSCHIG00000026538	MRPL54	63	62.069	Capra_hircus
ENSIPUG00000024854	mrpl54	67	62.105	ENSCAPG00000012166	MRPL54	89	62.353	Cavia_aperea
ENSIPUG00000024854	mrpl54	75	58.879	ENSCPOG00000031082	MRPL54	62	62.353	Cavia_porcellus
ENSIPUG00000024854	mrpl54	75	63.551	ENSCCAG00000000138	MRPL54	64	62.500	Cebus_capucinus
ENSIPUG00000024854	mrpl54	78	59.459	ENSCATG00000014066	MRPL54	62	64.706	Cercocebus_atys
ENSIPUG00000024854	mrpl54	75	58.654	ENSCLAG00000007908	MRPL54	65	60.227	Chinchilla_lanigera
ENSIPUG00000024854	mrpl54	78	59.459	ENSCSAG00000010950	MRPL54	62	64.706	Chlorocebus_sabaeus
ENSIPUG00000024854	mrpl54	76	60.377	ENSCPBG00000017103	MRPL54	51	59.091	Chrysemys_picta_bellii
ENSIPUG00000024854	mrpl54	80	30.631	ENSCING00000019896	-	54	38.961	Ciona_intestinalis
ENSIPUG00000024854	mrpl54	80	35.965	ENSCSAVG00000009604	-	59	40.000	Ciona_savignyi
ENSIPUG00000024854	mrpl54	96	52.555	ENSCANG00000027841	MRPL54	64	63.636	Colobus_angolensis_palliatus
ENSIPUG00000024854	mrpl54	75	61.682	ENSCGRG00001019482	Mrpl54	64	61.364	Cricetulus_griseus_chok1gshd
ENSIPUG00000024854	mrpl54	75	61.682	ENSCGRG00000010923	Mrpl54	64	61.364	Cricetulus_griseus_crigri
ENSIPUG00000024854	mrpl54	76	68.868	ENSCSEG00000019883	mrpl54	71	68.868	Cynoglossus_semilaevis
ENSIPUG00000024854	mrpl54	100	61.429	ENSCVAG00000002210	mrpl54	91	66.929	Cyprinodon_variegatus
ENSIPUG00000024854	mrpl54	96	58.209	ENSDARG00000071468	mrpl54	97	58.209	Danio_rerio
ENSIPUG00000024854	mrpl54	73	54.808	ENSDNOG00000007387	MRPL54	63	59.302	Dasypus_novemcinctus
ENSIPUG00000024854	mrpl54	75	59.615	ENSDORG00000005326	Mrpl54	66	62.500	Dipodomys_ordii
ENSIPUG00000024854	mrpl54	56	42.308	FBgn0034579	mRpL54	59	42.308	Drosophila_melanogaster
ENSIPUG00000024854	mrpl54	75	57.009	ENSETEG00000017500	MRPL54	66	57.955	Echinops_telfairi
ENSIPUG00000024854	mrpl54	68	53.191	ENSEBUG00000003179	mrpl54	75	52.874	Eptatretus_burgeri
ENSIPUG00000024854	mrpl54	75	58.491	ENSEASG00005022283	MRPL54	64	60.920	Equus_asinus_asinus
ENSIPUG00000024854	mrpl54	78	56.757	ENSECAG00000001515	MRPL54	64	60.920	Equus_caballus
ENSIPUG00000024854	mrpl54	73	76.471	ENSELUG00000022358	mrpl54	62	76.744	Esox_lucius
ENSIPUG00000024854	mrpl54	75	58.879	ENSFCAG00000007144	MRPL54	64	62.500	Felis_catus
ENSIPUG00000024854	mrpl54	70	59.794	ENSFALG00000011660	MRPL54	80	59.302	Ficedula_albicollis
ENSIPUG00000024854	mrpl54	75	56.075	ENSFDAG00000020803	MRPL54	64	59.091	Fukomys_damarensis
ENSIPUG00000024854	mrpl54	74	57.282	ENSGALG00000027611	MRPL54	71	56.977	Gallus_gallus
ENSIPUG00000024854	mrpl54	87	66.942	ENSGAFG00000016193	mrpl54	91	57.353	Gambusia_affinis
ENSIPUG00000024854	mrpl54	70	62.887	ENSGAGG00000020238	MRPL54	68	62.791	Gopherus_agassizii
ENSIPUG00000024854	mrpl54	95	54.074	ENSGGOG00000014722	MRPL54	64	63.636	Gorilla_gorilla
ENSIPUG00000024854	mrpl54	76	78.095	ENSHBUG00000009028	mrpl54	52	77.273	Haplochromis_burtoni
ENSIPUG00000024854	mrpl54	75	56.731	ENSHGLG00000006157	MRPL54	66	57.955	Heterocephalus_glaber_female
ENSIPUG00000024854	mrpl54	75	56.731	ENSHGLG00100000788	MRPL54	66	57.955	Heterocephalus_glaber_male
ENSIPUG00000024854	mrpl54	73	72.549	ENSHCOG00000000536	mrpl54	62	70.455	Hippocampus_comes
ENSIPUG00000024854	mrpl54	71	62.245	ENSSTOG00000022378	MRPL54	90	63.636	Ictidomys_tridecemlineatus
ENSIPUG00000024854	mrpl54	76	59.091	ENSJJAG00000020405	Mrpl54	60	62.651	Jaculus_jaculus
ENSIPUG00000024854	mrpl54	88	62.097	ENSKMAG00000022310	mrpl54	62	72.093	Kryptolebias_marmoratus
ENSIPUG00000024854	mrpl54	98	61.765	ENSLBEG00000005935	mrpl54	64	75.000	Labrus_bergylta
ENSIPUG00000024854	mrpl54	83	65.854	ENSLACG00000013912	MRPL54	66	72.727	Latimeria_chalumnae
ENSIPUG00000024854	mrpl54	87	70.248	ENSLOCG00000003860	mrpl54	98	65.441	Lepisosteus_oculatus
ENSIPUG00000024854	mrpl54	95	47.794	ENSLAFG00000029657	MRPL54	63	61.364	Loxodonta_africana
ENSIPUG00000024854	mrpl54	78	59.459	ENSMFAG00000003311	MRPL54	62	64.706	Macaca_fascicularis
ENSIPUG00000024854	mrpl54	78	59.459	ENSMMUG00000044080	MRPL54	62	64.706	Macaca_mulatta
ENSIPUG00000024854	mrpl54	78	59.459	ENSMNEG00000039499	MRPL54	62	64.706	Macaca_nemestrina
ENSIPUG00000024854	mrpl54	76	74.528	ENSMAMG00000003291	mrpl54	67	76.136	Mastacembelus_armatus
ENSIPUG00000024854	mrpl54	76	78.095	ENSMZEG00005009023	mrpl54	52	77.273	Maylandia_zebra
ENSIPUG00000024854	mrpl54	69	55.208	ENSMGAG00000000951	MRPL54	89	56.977	Meleagris_gallopavo
ENSIPUG00000024854	mrpl54	75	60.577	ENSMAUG00000009543	Mrpl54	65	63.636	Mesocricetus_auratus
ENSIPUG00000024854	mrpl54	95	50.370	ENSMICG00000034581	MRPL54	54	62.353	Microcebus_murinus
ENSIPUG00000024854	mrpl54	75	59.813	ENSMOCG00000017895	Mrpl54	64	61.364	Microtus_ochrogaster
ENSIPUG00000024854	mrpl54	96	61.654	ENSMMOG00000020370	mrpl54	70	70.455	Mola_mola
ENSIPUG00000024854	mrpl54	76	63.551	ENSMODG00000000602	MRPL54	63	67.059	Monodelphis_domestica
ENSIPUG00000024854	mrpl54	79	68.182	ENSMALG00000020280	mrpl54	64	68.182	Monopterus_albus
ENSIPUG00000024854	mrpl54	75	60.577	MGP_CAROLIEiJ_G0015629	Mrpl54	65	61.364	Mus_caroli
ENSIPUG00000024854	mrpl54	75	59.615	ENSMUSG00000034932	Mrpl54	65	60.227	Mus_musculus
ENSIPUG00000024854	mrpl54	76	59.434	MGP_PahariEiJ_G0031042	Mrpl54	65	61.364	Mus_pahari
ENSIPUG00000024854	mrpl54	75	60.577	MGP_SPRETEiJ_G0016447	Mrpl54	65	61.364	Mus_spretus
ENSIPUG00000024854	mrpl54	61	67.059	ENSMLUG00000010801	MRPL54	83	65.909	Myotis_lucifugus
ENSIPUG00000024854	mrpl54	78	53.097	ENSNGAG00000021044	Mrpl54	63	59.091	Nannospalax_galili
ENSIPUG00000024854	mrpl54	76	78.095	ENSNBRG00000000568	mrpl54	64	77.273	Neolamprologus_brichardi
ENSIPUG00000024854	mrpl54	79	63.964	ENSMEUG00000013033	MRPL54	64	69.048	Notamacropus_eugenii
ENSIPUG00000024854	mrpl54	85	58.475	ENSOPRG00000010035	-	65	64.368	Ochotona_princeps
ENSIPUG00000024854	mrpl54	75	58.879	ENSODEG00000013969	MRPL54	64	60.227	Octodon_degus
ENSIPUG00000024854	mrpl54	76	78.095	ENSONIG00000002312	mrpl54	57	77.273	Oreochromis_niloticus
ENSIPUG00000024854	mrpl54	69	70.833	ENSORLG00000016960	mrpl54	71	68.182	Oryzias_latipes
ENSIPUG00000024854	mrpl54	88	60.163	ENSORLG00020014934	mrpl54	85	69.318	Oryzias_latipes_hni
ENSIPUG00000024854	mrpl54	69	70.833	ENSORLG00015010788	mrpl54	69	68.182	Oryzias_latipes_hsok
ENSIPUG00000024854	mrpl54	76	73.333	ENSOMEG00000009005	mrpl54	64	72.727	Oryzias_melastigma
ENSIPUG00000024854	mrpl54	95	50.370	ENSOGAG00000033519	-	64	62.500	Otolemur_garnettii
ENSIPUG00000024854	mrpl54	94	50.746	ENSOGAG00000026254	-	64	63.218	Otolemur_garnettii
ENSIPUG00000024854	mrpl54	95	53.333	ENSPPAG00000042418	MRPL54	64	62.500	Pan_paniscus
ENSIPUG00000024854	mrpl54	75	60.000	ENSPPRG00000012325	MRPL54	66	63.636	Panthera_pardus
ENSIPUG00000024854	mrpl54	75	58.182	ENSPTIG00000017727	MRPL54	62	63.636	Panthera_tigris_altaica
ENSIPUG00000024854	mrpl54	95	53.333	ENSPTRG00000010276	MRPL54	64	62.500	Pan_troglodytes
ENSIPUG00000024854	mrpl54	95	52.593	ENSPANG00000033944	MRPL54	62	64.706	Papio_anubis
ENSIPUG00000024854	mrpl54	76	73.832	ENSPKIG00000009984	mrpl54	66	59.677	Paramormyrops_kingsleyae
ENSIPUG00000024854	mrpl54	68	60.000	ENSPSIG00000013587	MRPL54	93	59.091	Pelodiscus_sinensis
ENSIPUG00000024854	mrpl54	83	67.241	ENSPMGG00000015972	mrpl54	58	70.455	Periophthalmus_magnuspinnatus
ENSIPUG00000024854	mrpl54	75	61.682	ENSPEMG00000022929	Mrpl54	62	63.529	Peromyscus_maniculatus_bairdii
ENSIPUG00000024854	mrpl54	77	60.185	ENSPCIG00000025383	MRPL54	63	64.706	Phascolarctos_cinereus
ENSIPUG00000024854	mrpl54	77	70.093	ENSPFOG00000007409	mrpl54	64	69.318	Poecilia_formosa
ENSIPUG00000024854	mrpl54	77	70.093	ENSPLAG00000001640	mrpl54	64	69.318	Poecilia_latipinna
ENSIPUG00000024854	mrpl54	77	70.093	ENSPLAG00000001633	mrpl54	64	69.318	Poecilia_latipinna
ENSIPUG00000024854	mrpl54	77	70.093	ENSPMEG00000021068	mrpl54	64	69.318	Poecilia_mexicana
ENSIPUG00000024854	mrpl54	77	70.093	ENSPMEG00000021078	mrpl54	64	69.318	Poecilia_mexicana
ENSIPUG00000024854	mrpl54	98	58.088	ENSPREG00000012425	mrpl54	91	54.412	Poecilia_reticulata
ENSIPUG00000024854	mrpl54	95	54.815	ENSPPYG00000009386	MRPL54	64	63.636	Pongo_abelii
ENSIPUG00000024854	mrpl54	75	59.813	ENSPCAG00000000690	MRPL54	62	62.353	Procavia_capensis
ENSIPUG00000024854	mrpl54	95	51.852	ENSPCOG00000027550	MRPL54	64	62.500	Propithecus_coquereli
ENSIPUG00000024854	mrpl54	76	77.143	ENSPNYG00000022006	mrpl54	52	76.136	Pundamilia_nyererei
ENSIPUG00000024854	mrpl54	100	74.101	ENSPNAG00000000077	mrpl54	100	74.101	Pygocentrus_nattereri
ENSIPUG00000024854	mrpl54	75	60.577	ENSRNOG00000020464	Mrpl54	65	60.227	Rattus_norvegicus
ENSIPUG00000024854	mrpl54	78	60.360	ENSRBIG00000027038	MRPL54	65	63.636	Rhinopithecus_bieti
ENSIPUG00000024854	mrpl54	78	60.360	ENSRROG00000018776	MRPL54	65	63.636	Rhinopithecus_roxellana
ENSIPUG00000024854	mrpl54	75	64.486	ENSSBOG00000028081	MRPL54	64	63.636	Saimiri_boliviensis_boliviensis
ENSIPUG00000024854	mrpl54	75	61.905	ENSSHAG00000002557	MRPL54	63	67.059	Sarcophilus_harrisii
ENSIPUG00000024854	mrpl54	82	70.435	ENSSFOG00015008073	mrpl54	63	79.545	Scleropages_formosus
ENSIPUG00000024854	mrpl54	76	73.585	ENSSMAG00000009226	mrpl54	77	73.585	Scophthalmus_maximus
ENSIPUG00000024854	mrpl54	76	77.358	ENSSDUG00000009545	mrpl54	64	79.545	Seriola_dumerili
ENSIPUG00000024854	mrpl54	76	76.415	ENSSLDG00000001781	mrpl54	64	78.409	Seriola_lalandi_dorsalis
ENSIPUG00000024854	mrpl54	70	62.887	ENSSPUG00000015361	MRPL54	67	62.500	Sphenodon_punctatus
ENSIPUG00000024854	mrpl54	76	66.038	ENSSPAG00000003775	-	84	51.493	Stegastes_partitus
ENSIPUG00000024854	mrpl54	76	66.038	ENSSPAG00000015601	mrpl54	84	51.493	Stegastes_partitus
ENSIPUG00000024854	mrpl54	81	55.652	ENSSSCG00000024242	MRPL54	64	62.500	Sus_scrofa
ENSIPUG00000024854	mrpl54	97	60.000	ENSTRUG00000004609	mrpl54	64	71.591	Takifugu_rubripes
ENSIPUG00000024854	mrpl54	76	71.698	ENSTNIG00000015468	mrpl54	64	69.318	Tetraodon_nigroviridis
ENSIPUG00000024854	mrpl54	95	48.485	ENSTTRG00000004410	MRPL54	65	60.227	Tursiops_truncatus
ENSIPUG00000024854	mrpl54	75	58.879	ENSUAMG00000021572	MRPL54	64	61.364	Ursus_americanus
ENSIPUG00000024854	mrpl54	75	59.813	ENSUMAG00000007416	MRPL54	64	61.364	Ursus_maritimus
ENSIPUG00000024854	mrpl54	95	48.148	ENSVVUG00000004420	MRPL54	64	59.091	Vulpes_vulpes
ENSIPUG00000024854	mrpl54	81	61.062	ENSXETG00000033250	MRPL54	85	60.526	Xenopus_tropicalis
ENSIPUG00000024854	mrpl54	98	58.824	ENSXMAG00000003500	mrpl54	91	56.618	Xiphophorus_maculatus