EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024869 (Gene tree)
Gene ID: 108270955
Gene Symbol: safb2
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 13836 bases
Position: chr10:13717183-13731018
Accession: 108270955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037153	RRM_5	PF13893.6	1.7e-06	1	1
ENSIPUP00000037155	RRM_5	PF13893.6	1.7e-06	1	1
ENSIPUP00000037155	RRM_1	PF00076.22	2.5e-13	1	1
ENSIPUP00000037153	RRM_1	PF00076.22	2.5e-13	1	1
ENSIPUP00000037153	SAP	PF02037.27	6.4e-08	1	1
ENSIPUP00000037155	SAP	PF02037.27	6.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038604	-	3122	XM_017478017	ENSIPUP00000037155	835 (aa)	XP_017333506	A0A2D0RTK6
ENSIPUT00000038602	-	2496	-	ENSIPUP00000037153	831 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024869	safb2	97	46.536	ENSG00000160633	SAFB	86	60.000	Homo_sapiens
ENSIPUG00000024869	safb2	99	64.252	ENSAPOG00000022508	safb	99	64.029	Acanthochromis_polyacanthus
ENSIPUG00000024869	safb2	99	60.427	ENSACIG00000006247	safb	100	59.145	Amphilophus_citrinellus
ENSIPUG00000024869	safb2	95	62.654	ENSAOCG00000006308	safb	98	63.052	Amphiprion_ocellaris
ENSIPUG00000024869	safb2	100	62.631	ENSAPEG00000023342	safb	99	63.007	Amphiprion_percula
ENSIPUG00000024869	safb2	99	64.610	ENSATEG00000004998	safb	99	64.463	Anabas_testudineus
ENSIPUG00000024869	safb2	58	44.954	ENSAPLG00000006355	-	68	59.859	Anas_platyrhynchos
ENSIPUG00000024869	safb2	59	44.186	ENSAPLG00000005780	-	97	46.109	Anas_platyrhynchos
ENSIPUG00000024869	safb2	98	46.102	ENSANAG00000028821	SAFB	97	45.893	Aotus_nancymaae
ENSIPUG00000024869	safb2	99	63.496	ENSACLG00000001926	safb	99	63.321	Astatotilapia_calliptera
ENSIPUG00000024869	safb2	98	75.801	ENSAMXG00000018154	safb	97	76.576	Astyanax_mexicanus
ENSIPUG00000024869	safb2	98	45.879	ENSBTAG00000007875	SAFB	57	49.251	Bos_taurus
ENSIPUG00000024869	safb2	72	59.836	ENSCJAG00000017081	SAFB	92	53.320	Callithrix_jacchus
ENSIPUG00000024869	safb2	98	45.494	ENSCHIG00000007262	SAFB	65	57.241	Capra_hircus
ENSIPUG00000024869	safb2	63	45.041	ENSCPOG00000026322	SAFB	97	44.909	Cavia_porcellus
ENSIPUG00000024869	safb2	98	46.205	ENSCCAG00000020193	SAFB	97	46.103	Cebus_capucinus
ENSIPUG00000024869	safb2	97	46.605	ENSCATG00000029994	SAFB	97	45.385	Cercocebus_atys
ENSIPUG00000024869	safb2	63	45.277	ENSCLAG00000007734	SAFB	97	45.931	Chinchilla_lanigera
ENSIPUG00000024869	safb2	64	44.677	ENSCSAG00000009949	SAFB	97	45.385	Chlorocebus_sabaeus
ENSIPUG00000024869	safb2	92	48.081	ENSCPBG00000010936	-	68	56.117	Chrysemys_picta_bellii
ENSIPUG00000024869	safb2	92	45.940	ENSCPBG00000010928	-	96	45.564	Chrysemys_picta_bellii
ENSIPUG00000024869	safb2	63	45.406	ENSCANG00000004774	-	86	60.000	Colobus_angolensis_palliatus
ENSIPUG00000024869	safb2	95	43.488	ENSCANG00000019754	-	93	41.505	Colobus_angolensis_palliatus
ENSIPUG00000024869	safb2	63	45.663	ENSCGRG00001002254	Safb	56	53.160	Cricetulus_griseus_chok1gshd
ENSIPUG00000024869	safb2	55	40.630	ENSCGRG00000011529	Safb	57	53.160	Cricetulus_griseus_crigri
ENSIPUG00000024869	safb2	98	57.316	ENSCSEG00000019870	safb	99	57.091	Cynoglossus_semilaevis
ENSIPUG00000024869	safb2	100	54.785	ENSCVAG00000002226	safb	99	55.423	Cyprinodon_variegatus
ENSIPUG00000024869	safb2	97	71.344	ENSDARG00000020467	safb	99	69.965	Danio_rerio
ENSIPUG00000024869	safb2	65	45.064	ENSDNOG00000015746	SAFB	51	51.507	Dasypus_novemcinctus
ENSIPUG00000024869	safb2	63	44.572	ENSDORG00000016200	Safb	56	47.748	Dipodomys_ordii
ENSIPUG00000024869	safb2	50	60.476	ENSETEG00000018679	SAFB	53	50.877	Echinops_telfairi
ENSIPUG00000024869	safb2	63	45.531	ENSEASG00005023019	SAFB	58	50.743	Equus_asinus_asinus
ENSIPUG00000024869	safb2	63	46.465	ENSECAG00000018659	SAFB	50	48.980	Equus_caballus
ENSIPUG00000024869	safb2	100	64.073	ENSELUG00000022327	safb	100	63.387	Esox_lucius
ENSIPUG00000024869	safb2	65	46.538	ENSFALG00000013882	-	91	47.204	Ficedula_albicollis
ENSIPUG00000024869	safb2	99	58.173	ENSFHEG00000004219	safb	100	56.671	Fundulus_heteroclitus
ENSIPUG00000024869	safb2	99	58.568	ENSGMOG00000014280	safb	100	57.621	Gadus_morhua
ENSIPUG00000024869	safb2	64	45.382	ENSGALG00000001948	-	74	59.545	Gallus_gallus
ENSIPUG00000024869	safb2	65	46.353	ENSGALG00000013365	-	94	48.194	Gallus_gallus
ENSIPUG00000024869	safb2	100	54.732	ENSGAFG00000016162	safb	100	53.531	Gambusia_affinis
ENSIPUG00000024869	safb2	99	60.253	ENSGACG00000011385	safb	99	58.633	Gasterosteus_aculeatus
ENSIPUG00000024869	safb2	64	55.517	ENSGAGG00000017702	-	82	57.407	Gopherus_agassizii
ENSIPUG00000024869	safb2	97	50.324	ENSGAGG00000008424	-	61	59.194	Gopherus_agassizii
ENSIPUG00000024869	safb2	97	46.651	ENSGGOG00000015109	SAFB	86	60.000	Gorilla_gorilla
ENSIPUG00000024869	safb2	99	59.308	ENSHBUG00000009218	safb	98	57.706	Haplochromis_burtoni
ENSIPUG00000024869	safb2	63	45.588	ENSHGLG00000015883	SAFB	97	45.210	Heterocephalus_glaber_female
ENSIPUG00000024869	safb2	84	45.425	ENSHGLG00100004228	SAFB	73	44.006	Heterocephalus_glaber_male
ENSIPUG00000024869	safb2	94	56.055	ENSHCOG00000001705	safb	98	57.928	Hippocampus_comes
ENSIPUG00000024869	safb2	58	43.902	ENSSTOG00000002783	SAFB	96	41.560	Ictidomys_tridecemlineatus
ENSIPUG00000024869	safb2	99	61.511	ENSKMAG00000022308	safb	99	61.484	Kryptolebias_marmoratus
ENSIPUG00000024869	safb2	100	61.451	ENSLBEG00000006015	safb	99	61.324	Labrus_bergylta
ENSIPUG00000024869	safb2	65	45.543	ENSLACG00000018090	SAFB	97	51.606	Latimeria_chalumnae
ENSIPUG00000024869	safb2	98	64.658	ENSLOCG00000003613	safb	99	64.908	Lepisosteus_oculatus
ENSIPUG00000024869	safb2	96	46.078	ENSLAFG00000003840	SAFB	97	46.841	Loxodonta_africana
ENSIPUG00000024869	safb2	97	46.605	ENSMFAG00000003885	SAFB	86	60.000	Macaca_fascicularis
ENSIPUG00000024869	safb2	98	45.676	ENSMMUG00000017970	SAFB	86	60.000	Macaca_mulatta
ENSIPUG00000024869	safb2	64	43.328	ENSMNEG00000035637	SAFB	86	60.000	Macaca_nemestrina
ENSIPUG00000024869	safb2	64	41.176	ENSMLEG00000038637	SAFB	86	60.000	Mandrillus_leucophaeus
ENSIPUG00000024869	safb2	99	63.857	ENSMAMG00000003357	safb	91	62.731	Mastacembelus_armatus
ENSIPUG00000024869	safb2	99	63.615	ENSMZEG00005009120	safb	99	63.441	Maylandia_zebra
ENSIPUG00000024869	safb2	62	44.123	ENSMGAG00000001101	-	94	46.449	Meleagris_gallopavo
ENSIPUG00000024869	safb2	64	45.000	ENSMGAG00000001051	-	76	60.120	Meleagris_gallopavo
ENSIPUG00000024869	safb2	86	42.132	ENSMICG00000046795	-	90	64.368	Microcebus_murinus
ENSIPUG00000024869	safb2	66	46.497	ENSMICG00000008739	-	95	44.075	Microcebus_murinus
ENSIPUG00000024869	safb2	63	45.351	ENSMOCG00000014040	Safb	95	45.326	Microtus_ochrogaster
ENSIPUG00000024869	safb2	95	46.623	ENSMODG00000001236	SAFB	95	43.388	Monodelphis_domestica
ENSIPUG00000024869	safb2	99	63.127	ENSMALG00000020330	safb	99	62.285	Monopterus_albus
ENSIPUG00000024869	safb2	63	44.372	MGP_CAROLIEiJ_G0021780	Safb	55	48.694	Mus_caroli
ENSIPUG00000024869	safb2	63	44.861	ENSMUSG00000071054	Safb	55	52.612	Mus_musculus
ENSIPUG00000024869	safb2	62	44.754	MGP_PahariEiJ_G0020769	Safb	95	40.909	Mus_pahari
ENSIPUG00000024869	safb2	98	46.105	ENSMLUG00000001081	SAFB	97	42.997	Myotis_lucifugus
ENSIPUG00000024869	safb2	97	46.474	ENSNLEG00000013551	SAFB	99	43.564	Nomascus_leucogenys
ENSIPUG00000024869	safb2	58	42.857	ENSOPRG00000011561	-	99	40.772	Ochotona_princeps
ENSIPUG00000024869	safb2	63	44.901	ENSODEG00000014838	SAFB	97	42.904	Octodon_degus
ENSIPUG00000024869	safb2	99	63.412	ENSONIG00000002318	safb	99	63.337	Oreochromis_niloticus
ENSIPUG00000024869	safb2	98	58.775	ENSORLG00000016989	safb	99	58.382	Oryzias_latipes
ENSIPUG00000024869	safb2	98	55.702	ENSORLG00020000404	safb	100	53.209	Oryzias_latipes_hni
ENSIPUG00000024869	safb2	99	59.953	ENSORLG00015010733	safb	99	58.872	Oryzias_latipes_hsok
ENSIPUG00000024869	safb2	100	59.907	ENSOMEG00000009066	safb	100	58.565	Oryzias_melastigma
ENSIPUG00000024869	safb2	63	46.922	ENSOGAG00000027769	SAFB	56	50.281	Otolemur_garnettii
ENSIPUG00000024869	safb2	98	42.454	ENSOARG00000007662	-	57	47.280	Ovis_aries
ENSIPUG00000024869	safb2	97	46.651	ENSPPAG00000035129	SAFB	86	60.000	Pan_paniscus
ENSIPUG00000024869	safb2	97	46.651	ENSPTRG00000010335	SAFB	86	60.000	Pan_troglodytes
ENSIPUG00000024869	safb2	98	46.070	ENSPANG00000007770	SAFB	86	60.000	Papio_anubis
ENSIPUG00000024869	safb2	100	65.953	ENSPKIG00000009902	safb	100	64.938	Paramormyrops_kingsleyae
ENSIPUG00000024869	safb2	99	48.335	ENSPSIG00000009367	-	61	55.652	Pelodiscus_sinensis
ENSIPUG00000024869	safb2	99	47.996	ENSPSIG00000011679	-	68	57.521	Pelodiscus_sinensis
ENSIPUG00000024869	safb2	63	44.590	ENSPEMG00000020428	Safb	95	43.445	Peromyscus_maniculatus_bairdii
ENSIPUG00000024869	safb2	58	52.206	ENSPCIG00000009504	-	93	52.421	Phascolarctos_cinereus
ENSIPUG00000024869	safb2	99	57.601	ENSPFOG00000007745	safb	99	57.297	Poecilia_formosa
ENSIPUG00000024869	safb2	100	56.690	ENSPLAG00000001614	safb	100	53.950	Poecilia_latipinna
ENSIPUG00000024869	safb2	99	57.363	ENSPMEG00000021023	safb	99	57.057	Poecilia_mexicana
ENSIPUG00000024869	safb2	100	56.805	ENSPREG00000012496	safb	99	56.353	Poecilia_reticulata
ENSIPUG00000024869	safb2	64	44.733	ENSPPYG00000009428	SAFB	97	45.197	Pongo_abelii
ENSIPUG00000024869	safb2	65	42.197	ENSPCAG00000006475	SAFB	62	61.667	Procavia_capensis
ENSIPUG00000024869	safb2	99	42.826	ENSPCOG00000014090	SAFB	56	49.534	Propithecus_coquereli
ENSIPUG00000024869	safb2	98	42.967	ENSPVAG00000004913	SAFB	68	60.185	Pteropus_vampyrus
ENSIPUG00000024869	safb2	100	79.089	ENSPNAG00000021838	safb	100	78.621	Pygocentrus_nattereri
ENSIPUG00000024869	safb2	95	45.023	ENSRBIG00000042509	SAFB	86	60.000	Rhinopithecus_bieti
ENSIPUG00000024869	safb2	97	46.367	ENSRROG00000029278	SAFB	86	60.000	Rhinopithecus_roxellana
ENSIPUG00000024869	safb2	98	46.162	ENSSBOG00000026291	SAFB	97	45.742	Saimiri_boliviensis_boliviensis
ENSIPUG00000024869	safb2	100	66.667	ENSSFOG00015008156	safb	100	64.699	Scleropages_formosus
ENSIPUG00000024869	safb2	99	64.111	ENSSMAG00000009316	safb	99	63.498	Scophthalmus_maximus
ENSIPUG00000024869	safb2	98	64.431	ENSSDUG00000009652	safb	99	63.429	Seriola_dumerili
ENSIPUG00000024869	safb2	100	64.070	ENSSLDG00000001670	safb	99	64.413	Seriola_lalandi_dorsalis
ENSIPUG00000024869	safb2	59	42.058	ENSSARG00000010475	SAFB	96	38.935	Sorex_araneus
ENSIPUG00000024869	safb2	56	43.511	ENSSPUG00000009747	-	65	43.574	Sphenodon_punctatus
ENSIPUG00000024869	safb2	50	43.053	ENSSPUG00000009820	-	69	56.063	Sphenodon_punctatus
ENSIPUG00000024869	safb2	98	62.048	ENSSPAG00000015682	safb	98	60.482	Stegastes_partitus
ENSIPUG00000024869	safb2	98	44.763	ENSSSCG00000013522	SAFB	52	47.330	Sus_scrofa
ENSIPUG00000024869	safb2	63	46.777	ENSTGUG00000000502	-	95	48.446	Taeniopygia_guttata
ENSIPUG00000024869	safb2	65	45.659	ENSTGUG00000000489	-	96	50.294	Taeniopygia_guttata
ENSIPUG00000024869	safb2	100	62.093	ENSTRUG00000003567	safb	100	60.560	Takifugu_rubripes
ENSIPUG00000024869	safb2	91	54.788	ENSTNIG00000015470	safb	100	54.513	Tetraodon_nigroviridis
ENSIPUG00000024869	safb2	84	78.947	ENSTTRG00000013588	SAFB	62	66.000	Tursiops_truncatus
ENSIPUG00000024869	safb2	76	46.844	ENSUMAG00000009734	SAFB	79	61.458	Ursus_maritimus
ENSIPUG00000024869	safb2	61	55.043	ENSVPAG00000012043	SAFB	61	51.807	Vicugna_pacos
ENSIPUG00000024869	safb2	82	45.763	ENSXETG00000008755	safb	93	49.219	Xenopus_tropicalis
ENSIPUG00000024869	safb2	100	57.447	ENSXMAG00000003458	safb	99	57.109	Xiphophorus_maculatus