EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024954 (Gene tree)
Gene ID: 108276832
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D0
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 9263 bases
Position: chr16:7212255-7221517
Accession: 108276832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037290	CBFNT	PF08143.11	3.2e-06	1	1
ENSIPUP00000037293	CBFNT	PF08143.11	3.2e-06	1	1
ENSIPUP00000037290	RRM_1	PF00076.22	1.3e-34	1	2
ENSIPUP00000037290	RRM_1	PF00076.22	1.3e-34	2	2
ENSIPUP00000037293	RRM_1	PF00076.22	1.3e-34	1	2
ENSIPUP00000037293	RRM_1	PF00076.22	1.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038750	-	2030	XM_017488840	ENSIPUP00000037293	309 (aa)	XP_017344329	A0A2D0SPW8
ENSIPUT00000038746	-	4381	XM_017488844	ENSIPUP00000037290	309 (aa)	XP_017344333	A0A2D0SPW8

Gene Model

Click here to download ENSIPUG00000024954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024954	hnrnpd	95	62.813	ENSIPUG00000018218	HNRNPAB	99	60.355
ENSIPUG00000024954	hnrnpd	61	48.684	ENSIPUG00000003732	msi2b	53	45.109
ENSIPUG00000024954	hnrnpd	61	48.684	ENSIPUG00000021097	msi2a	60	44.565
ENSIPUG00000024954	hnrnpd	72	35.088	ENSIPUG00000002023	hnrnpa1a	83	34.934
ENSIPUG00000024954	hnrnpd	60	40.838	ENSIPUG00000022440	-	70	41.358
ENSIPUG00000024954	hnrnpd	77	35.496	ENSIPUG00000006899	dazap1	52	39.227
ENSIPUG00000024954	hnrnpd	56	35.393	ENSIPUG00000001991	-	72	35.882
ENSIPUG00000024954	hnrnpd	63	33.028	ENSIPUG00000004992	tardbp	52	33.696
ENSIPUG00000024954	hnrnpd	57	43.646	ENSIPUG00000019815	RO32	56	44.118
ENSIPUG00000024954	hnrnpd	85	37.313	ENSIPUG00000001976	msi1	53	46.429
ENSIPUG00000024954	hnrnpd	88	59.643	ENSIPUG00000024951	hnrnpdl	95	60.357
ENSIPUG00000024954	hnrnpd	89	64.894	ENSIPUG00000020220	hnrnpab	98	63.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024954	hnrnpd	89	79.496	ENSG00000138668	HNRNPD	100	89.189	Homo_sapiens
ENSIPUG00000024954	hnrnpd	99	82.051	ENSAPOG00000006184	hnrnpd	98	82.692	Acanthochromis_polyacanthus
ENSIPUG00000024954	hnrnpd	91	74.834	ENSAMEG00000005158	HNRNPD	94	72.185	Ailuropoda_melanoleuca
ENSIPUG00000024954	hnrnpd	80	84.462	ENSACIG00000008353	hnrnpd	81	85.259	Amphilophus_citrinellus
ENSIPUG00000024954	hnrnpd	99	75.962	ENSAOCG00000014191	hnrnpd	98	77.244	Amphiprion_ocellaris
ENSIPUG00000024954	hnrnpd	99	81.731	ENSAPEG00000005603	hnrnpd	98	82.372	Amphiprion_percula
ENSIPUG00000024954	hnrnpd	99	81.410	ENSATEG00000007097	hnrnpd	98	82.051	Anabas_testudineus
ENSIPUG00000024954	hnrnpd	86	81.081	ENSACAG00000010342	HNRNPD	100	75.290	Anolis_carolinensis
ENSIPUG00000024954	hnrnpd	91	80.142	ENSANAG00000035221	HNRNPD	87	74.915	Aotus_nancymaae
ENSIPUG00000024954	hnrnpd	87	89.189	ENSACLG00000026497	hnrnpd	100	89.961	Astatotilapia_calliptera
ENSIPUG00000024954	hnrnpd	99	83.923	ENSACLG00000025213	hnrnpd	98	84.566	Astatotilapia_calliptera
ENSIPUG00000024954	hnrnpd	99	84.194	ENSAMXG00000001477	hnrnpd	99	84.839	Astyanax_mexicanus
ENSIPUG00000024954	hnrnpd	89	75.758	ENSBTAG00000013952	HNRNPD	88	69.745	Bos_taurus
ENSIPUG00000024954	hnrnpd	89	80.576	ENSCJAG00000015165	HNRNPD	87	74.576	Callithrix_jacchus
ENSIPUG00000024954	hnrnpd	89	75.758	ENSCAFG00000025045	HNRNPD	88	70.064	Canis_familiaris
ENSIPUG00000024954	hnrnpd	89	75.758	ENSCAFG00020010713	HNRNPD	88	70.064	Canis_lupus_dingo
ENSIPUG00000024954	hnrnpd	89	80.576	ENSCHIG00000022317	HNRNPD	87	74.237	Capra_hircus
ENSIPUG00000024954	hnrnpd	87	77.451	ENSTSYG00000010395	HNRNPD	100	73.039	Carlito_syrichta
ENSIPUG00000024954	hnrnpd	86	72.031	ENSCPOG00000040484	HNRNPD	77	70.115	Cavia_porcellus
ENSIPUG00000024954	hnrnpd	89	80.935	ENSCCAG00000024528	HNRNPD	87	74.576	Cebus_capucinus
ENSIPUG00000024954	hnrnpd	64	60.804	ENSCCAG00000021563	-	71	60.145	Cebus_capucinus
ENSIPUG00000024954	hnrnpd	89	79.496	ENSCATG00000039829	HNRNPD	87	74.576	Cercocebus_atys
ENSIPUG00000024954	hnrnpd	89	80.866	ENSCLAG00000006540	HNRNPD	92	77.978	Chinchilla_lanigera
ENSIPUG00000024954	hnrnpd	89	74.411	ENSCSAG00000004463	HNRNPD	88	70.064	Chlorocebus_sabaeus
ENSIPUG00000024954	hnrnpd	91	75.618	ENSCHOG00000000045	HNRNPD	97	74.444	Choloepus_hoffmanni
ENSIPUG00000024954	hnrnpd	87	80.882	ENSCPBG00000008025	HNRNPD	85	77.580	Chrysemys_picta_bellii
ENSIPUG00000024954	hnrnpd	89	79.856	ENSCANG00000018501	HNRNPD	87	74.915	Colobus_angolensis_palliatus
ENSIPUG00000024954	hnrnpd	89	80.576	ENSCGRG00001014634	Hnrnpd	88	74.576	Cricetulus_griseus_chok1gshd
ENSIPUG00000024954	hnrnpd	90	75.801	ENSCGRG00000007563	Hnrnpd	96	74.539	Cricetulus_griseus_crigri
ENSIPUG00000024954	hnrnpd	97	81.433	ENSCSEG00000010909	hnrnpd	96	75.896	Cynoglossus_semilaevis
ENSIPUG00000024954	hnrnpd	99	77.244	ENSCVAG00000019790	hnrnpd	98	81.090	Cyprinodon_variegatus
ENSIPUG00000024954	hnrnpd	99	87.821	ENSDARG00000059246	hnrnpd	99	82.748	Danio_rerio
ENSIPUG00000024954	hnrnpd	57	73.295	ENSDNOG00000041055	-	69	73.295	Dasypus_novemcinctus
ENSIPUG00000024954	hnrnpd	75	68.050	ENSDNOG00000045079	-	71	68.900	Dasypus_novemcinctus
ENSIPUG00000024954	hnrnpd	91	75.972	ENSDNOG00000013830	-	75	74.815	Dasypus_novemcinctus
ENSIPUG00000024954	hnrnpd	89	79.783	ENSDORG00000012507	Hnrnpd	99	75.779	Dipodomys_ordii
ENSIPUG00000024954	hnrnpd	87	75.601	ENSETEG00000016709	HNRNPD	88	69.745	Echinops_telfairi
ENSIPUG00000024954	hnrnpd	89	80.935	ENSEASG00005016278	HNRNPD	87	74.576	Equus_asinus_asinus
ENSIPUG00000024954	hnrnpd	89	75.758	ENSECAG00000009344	HNRNPD	88	70.064	Equus_caballus
ENSIPUG00000024954	hnrnpd	91	68.439	ENSEEUG00000007552	HNRNPD	88	63.694	Erinaceus_europaeus
ENSIPUG00000024954	hnrnpd	79	81.600	ENSELUG00000003230	hnrnpd	82	83.197	Esox_lucius
ENSIPUG00000024954	hnrnpd	89	80.576	ENSFCAG00000027404	HNRNPD	88	70.064	Felis_catus
ENSIPUG00000024954	hnrnpd	89	81.227	ENSFALG00000005716	HNRNPD	83	78.339	Ficedula_albicollis
ENSIPUG00000024954	hnrnpd	90	75.801	ENSFDAG00000007958	HNRNPD	80	74.539	Fukomys_damarensis
ENSIPUG00000024954	hnrnpd	99	74.359	ENSFHEG00000006838	hnrnpd	98	81.090	Fundulus_heteroclitus
ENSIPUG00000024954	hnrnpd	99	76.825	ENSGMOG00000018481	hnrnpd	98	73.438	Gadus_morhua
ENSIPUG00000024954	hnrnpd	87	81.250	ENSGALG00000011184	HNRNPD	100	76.834	Gallus_gallus
ENSIPUG00000024954	hnrnpd	99	79.683	ENSGAFG00000003714	hnrnpd	98	77.778	Gambusia_affinis
ENSIPUG00000024954	hnrnpd	99	72.013	ENSGACG00000015669	hnrnpd	98	76.730	Gasterosteus_aculeatus
ENSIPUG00000024954	hnrnpd	87	75.601	ENSGAGG00000003656	HNRNPD	88	72.667	Gopherus_agassizii
ENSIPUG00000024954	hnrnpd	91	74.558	ENSGGOG00000026760	HNRNPD	94	76.923	Gorilla_gorilla
ENSIPUG00000024954	hnrnpd	99	83.923	ENSHBUG00000011794	hnrnpd	98	84.566	Haplochromis_burtoni
ENSIPUG00000024954	hnrnpd	91	80.142	ENSHGLG00000004214	HNRNPD	87	74.576	Heterocephalus_glaber_female
ENSIPUG00000024954	hnrnpd	92	80.385	ENSHGLG00100005996	HNRNPD	100	76.834	Heterocephalus_glaber_male
ENSIPUG00000024954	hnrnpd	99	74.359	ENSHCOG00000000087	hnrnpd	95	73.397	Hippocampus_comes
ENSIPUG00000024954	hnrnpd	89	79.496	ENSSTOG00000013970	HNRNPD	85	75.779	Ictidomys_tridecemlineatus
ENSIPUG00000024954	hnrnpd	89	79.496	ENSJJAG00000023387	Hnrnpd	99	74.237	Jaculus_jaculus
ENSIPUG00000024954	hnrnpd	99	77.492	ENSKMAG00000004310	hnrnpd	98	80.707	Kryptolebias_marmoratus
ENSIPUG00000024954	hnrnpd	99	82.958	ENSLBEG00000027508	hnrnpd	98	83.601	Labrus_bergylta
ENSIPUG00000024954	hnrnpd	99	78.065	ENSLACG00000005306	HNRNPD	99	75.806	Latimeria_chalumnae
ENSIPUG00000024954	hnrnpd	99	82.143	ENSLOCG00000010743	hnrnpd	99	82.143	Lepisosteus_oculatus
ENSIPUG00000024954	hnrnpd	87	77.860	ENSLAFG00000016483	HNRNPD	98	74.539	Loxodonta_africana
ENSIPUG00000024954	hnrnpd	89	79.496	ENSMFAG00000031674	HNRNPD	87	74.576	Macaca_fascicularis
ENSIPUG00000024954	hnrnpd	89	79.496	ENSMNEG00000028199	HNRNPD	87	74.576	Macaca_nemestrina
ENSIPUG00000024954	hnrnpd	89	79.496	ENSMLEG00000028370	HNRNPD	87	74.576	Mandrillus_leucophaeus
ENSIPUG00000024954	hnrnpd	99	83.280	ENSMAMG00000004971	hnrnpd	98	83.923	Mastacembelus_armatus
ENSIPUG00000024954	hnrnpd	99	83.923	ENSMZEG00005007558	hnrnpd	98	84.566	Maylandia_zebra
ENSIPUG00000024954	hnrnpd	86	80.385	ENSMGAG00000008051	HNRNPD	100	76.923	Meleagris_gallopavo
ENSIPUG00000024954	hnrnpd	89	80.576	ENSMAUG00000008830	Hnrnpd	88	74.576	Mesocricetus_auratus
ENSIPUG00000024954	hnrnpd	87	81.250	ENSMICG00000010984	HNRNPD	88	77.032	Microcebus_murinus
ENSIPUG00000024954	hnrnpd	91	79.152	ENSMOCG00000021398	Hnrnpd	87	74.237	Microtus_ochrogaster
ENSIPUG00000024954	hnrnpd	99	80.449	ENSMMOG00000008627	hnrnpd	98	80.128	Mola_mola
ENSIPUG00000024954	hnrnpd	90	75.415	ENSMODG00000011898	HNRNPD	79	72.757	Monodelphis_domestica
ENSIPUG00000024954	hnrnpd	99	79.808	ENSMALG00000016024	hnrnpd	98	80.449	Monopterus_albus
ENSIPUG00000024954	hnrnpd	89	79.137	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	92.000	Mus_caroli
ENSIPUG00000024954	hnrnpd	89	79.137	ENSMUSG00000000568	Hnrnpd	100	92.000	Mus_musculus
ENSIPUG00000024954	hnrnpd	89	80.216	MGP_PahariEiJ_G0017224	Hnrnpd	100	92.000	Mus_pahari
ENSIPUG00000024954	hnrnpd	89	79.137	MGP_SPRETEiJ_G0028443	Hnrnpd	100	92.000	Mus_spretus
ENSIPUG00000024954	hnrnpd	91	75.972	ENSMPUG00000014782	HNRNPD	97	74.815	Mustela_putorius_furo
ENSIPUG00000024954	hnrnpd	89	69.360	ENSMLUG00000010628	HNRNPD	88	63.694	Myotis_lucifugus
ENSIPUG00000024954	hnrnpd	89	80.576	ENSNGAG00000013451	Hnrnpd	88	74.576	Nannospalax_galili
ENSIPUG00000024954	hnrnpd	99	84.244	ENSNBRG00000019548	hnrnpd	98	84.887	Neolamprologus_brichardi
ENSIPUG00000024954	hnrnpd	88	80.657	ENSNLEG00000008600	HNRNPD	84	77.737	Nomascus_leucogenys
ENSIPUG00000024954	hnrnpd	69	75.000	ENSMEUG00000006804	-	58	70.122	Notamacropus_eugenii
ENSIPUG00000024954	hnrnpd	89	76.610	ENSOPRG00000009336	HNRNPD	87	69.872	Ochotona_princeps
ENSIPUG00000024954	hnrnpd	89	81.227	ENSODEG00000001897	HNRNPD	99	71.203	Octodon_degus
ENSIPUG00000024954	hnrnpd	99	83.923	ENSONIG00000015390	hnrnpd	98	84.566	Oreochromis_niloticus
ENSIPUG00000024954	hnrnpd	86	80.695	ENSOANG00000001932	HNRNPD	100	77.220	Ornithorhynchus_anatinus
ENSIPUG00000024954	hnrnpd	87	77.860	ENSOCUG00000001357	HNRNPD	98	74.539	Oryctolagus_cuniculus
ENSIPUG00000024954	hnrnpd	99	79.100	ENSORLG00000001833	hnrnpd	98	76.206	Oryzias_latipes
ENSIPUG00000024954	hnrnpd	89	83.394	ENSORLG00020014780	hnrnpd	83	79.783	Oryzias_latipes_hni
ENSIPUG00000024954	hnrnpd	99	79.100	ENSORLG00015002382	hnrnpd	98	76.206	Oryzias_latipes_hsok
ENSIPUG00000024954	hnrnpd	99	81.350	ENSOMEG00000018558	hnrnpd	98	76.849	Oryzias_melastigma
ENSIPUG00000024954	hnrnpd	89	75.421	ENSOGAG00000004075	HNRNPD	88	70.064	Otolemur_garnettii
ENSIPUG00000024954	hnrnpd	91	75.972	ENSOARG00000000579	HNRNPD	97	74.815	Ovis_aries
ENSIPUG00000024954	hnrnpd	91	79.859	ENSPPAG00000035750	HNRNPD	100	73.039	Pan_paniscus
ENSIPUG00000024954	hnrnpd	89	80.935	ENSPPRG00000012258	HNRNPD	87	74.576	Panthera_pardus
ENSIPUG00000024954	hnrnpd	91	79.859	ENSPTIG00000019434	HNRNPD	98	77.032	Panthera_tigris_altaica
ENSIPUG00000024954	hnrnpd	89	79.496	ENSPTRG00000016215	HNRNPD	87	74.576	Pan_troglodytes
ENSIPUG00000024954	hnrnpd	89	79.496	ENSPANG00000011785	HNRNPD	87	74.576	Papio_anubis
ENSIPUG00000024954	hnrnpd	98	81.908	ENSPKIG00000025512	hnrnpd	97	81.908	Paramormyrops_kingsleyae
ENSIPUG00000024954	hnrnpd	75	83.495	ENSPSIG00000017029	HNRNPD	79	83.000	Pelodiscus_sinensis
ENSIPUG00000024954	hnrnpd	90	71.821	ENSPMGG00000017169	hnrnpd	84	75.000	Periophthalmus_magnuspinnatus
ENSIPUG00000024954	hnrnpd	95	73.898	ENSPEMG00000014804	Hnrnpd	90	71.186	Peromyscus_maniculatus_bairdii
ENSIPUG00000024954	hnrnpd	90	81.495	ENSPCIG00000003112	HNRNPD	79	77.580	Phascolarctos_cinereus
ENSIPUG00000024954	hnrnpd	99	74.359	ENSPFOG00000002596	hnrnpd	98	81.410	Poecilia_formosa
ENSIPUG00000024954	hnrnpd	99	82.051	ENSPLAG00000004297	hnrnpd	98	81.410	Poecilia_latipinna
ENSIPUG00000024954	hnrnpd	99	74.359	ENSPMEG00000000152	hnrnpd	98	81.410	Poecilia_mexicana
ENSIPUG00000024954	hnrnpd	87	81.154	ENSPREG00000018081	hnrnpd	95	79.151	Poecilia_reticulata
ENSIPUG00000024954	hnrnpd	89	74.411	ENSPPYG00000014885	HNRNPD	88	70.064	Pongo_abelii
ENSIPUG00000024954	hnrnpd	61	73.016	ENSPPYG00000020411	-	74	76.786	Pongo_abelii
ENSIPUG00000024954	hnrnpd	89	74.497	ENSPCAG00000002182	HNRNPD	88	68.889	Procavia_capensis
ENSIPUG00000024954	hnrnpd	89	80.935	ENSPCOG00000021331	HNRNPD	87	74.576	Propithecus_coquereli
ENSIPUG00000024954	hnrnpd	89	74.747	ENSPVAG00000000003	HNRNPD	88	71.656	Pteropus_vampyrus
ENSIPUG00000024954	hnrnpd	99	83.601	ENSPNYG00000004884	hnrnpd	98	79.100	Pundamilia_nyererei
ENSIPUG00000024954	hnrnpd	100	89.068	ENSPNAG00000016368	hnrnpd	100	82.958	Pygocentrus_nattereri
ENSIPUG00000024954	hnrnpd	91	79.505	ENSRNOG00000002292	Hnrnpd	88	73.898	Rattus_norvegicus
ENSIPUG00000024954	hnrnpd	89	79.496	ENSRBIG00000035345	HNRNPD	87	74.576	Rhinopithecus_bieti
ENSIPUG00000024954	hnrnpd	89	79.496	ENSRROG00000011888	HNRNPD	87	74.576	Rhinopithecus_roxellana
ENSIPUG00000024954	hnrnpd	89	80.935	ENSSBOG00000032881	HNRNPD	87	74.576	Saimiri_boliviensis_boliviensis
ENSIPUG00000024954	hnrnpd	91	75.972	ENSSHAG00000013312	HNRNPD	97	74.815	Sarcophilus_harrisii
ENSIPUG00000024954	hnrnpd	98	87.171	ENSSFOG00015005913	hnrnpd	97	82.295	Scleropages_formosus
ENSIPUG00000024954	hnrnpd	99	80.831	ENSSMAG00000009686	hnrnpd	98	81.470	Scophthalmus_maximus
ENSIPUG00000024954	hnrnpd	99	82.372	ENSSDUG00000010792	hnrnpd	98	75.962	Seriola_dumerili
ENSIPUG00000024954	hnrnpd	99	81.350	ENSSLDG00000015962	hnrnpd	98	79.355	Seriola_lalandi_dorsalis
ENSIPUG00000024954	hnrnpd	91	74.468	ENSSARG00000006883	HNRNPD	97	72.491	Sorex_araneus
ENSIPUG00000024954	hnrnpd	86	79.151	ENSSPUG00000013677	HNRNPD	100	77.220	Sphenodon_punctatus
ENSIPUG00000024954	hnrnpd	97	82.951	ENSSPAG00000021014	hnrnpd	98	82.372	Stegastes_partitus
ENSIPUG00000024954	hnrnpd	89	80.935	ENSSSCG00000009249	HNRNPD	87	74.915	Sus_scrofa
ENSIPUG00000024954	hnrnpd	87	77.663	ENSTGUG00000002858	HNRNPD	95	71.656	Taeniopygia_guttata
ENSIPUG00000024954	hnrnpd	99	75.484	ENSTRUG00000018450	hnrnpd	98	75.484	Takifugu_rubripes
ENSIPUG00000024954	hnrnpd	76	76.891	ENSTNIG00000013499	hnrnpd	80	85.417	Tetraodon_nigroviridis
ENSIPUG00000024954	hnrnpd	87	73.801	ENSTBEG00000002327	HNRNPD	98	70.480	Tupaia_belangeri
ENSIPUG00000024954	hnrnpd	89	75.758	ENSTTRG00000007592	HNRNPD	88	70.064	Tursiops_truncatus
ENSIPUG00000024954	hnrnpd	92	75.439	ENSUAMG00000011374	HNRNPD	76	72.632	Ursus_americanus
ENSIPUG00000024954	hnrnpd	92	75.175	ENSUMAG00000008685	HNRNPD	85	72.378	Ursus_maritimus
ENSIPUG00000024954	hnrnpd	86	80.385	ENSVPAG00000004374	HNRNPD	100	76.923	Vicugna_pacos
ENSIPUG00000024954	hnrnpd	89	75.758	ENSVVUG00000024658	HNRNPD	88	70.064	Vulpes_vulpes
ENSIPUG00000024954	hnrnpd	89	83.094	ENSXETG00000012569	hnrnpd	99	78.261	Xenopus_tropicalis
ENSIPUG00000024954	hnrnpd	87	76.923	ENSXCOG00000017639	hnrnpd	100	84.615	Xiphophorus_couchianus
ENSIPUG00000024954	hnrnpd	99	73.802	ENSXMAG00000019151	hnrnpd	98	80.831	Xiphophorus_maculatus