EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024973 (Gene tree)
Gene ID: 108265714
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 47655 bases
Position: chr5:15330830-15378484
Accession: 108265714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037323	ResIII	PF04851.15	6.8e-06	1	1
ENSIPUP00000037326	ResIII	PF04851.15	6.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038783	-	4101	XM_017468338	ENSIPUP00000037326	1366 (aa)	XP_017323827	A0A2D0QZV6
ENSIPUT00000038780	-	4071	XM_017468333	ENSIPUP00000037323	1356 (aa)	XP_017323822	A0A2D0R230

Gene Model

Click here to download ENSIPUG00000024973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024973	-	79	63.021	ENSIPUG00000019664	rad54l2	77	61.681

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024973	-	96	53.348	ENSG00000164080	RAD54L2	87	57.945	Homo_sapiens
ENSIPUG00000024973	-	97	59.341	ENSAPOG00000024141	-	100	57.219	Acanthochromis_polyacanthus
ENSIPUG00000024973	-	96	53.421	ENSAMEG00000009326	RAD54L2	84	55.808	Ailuropoda_melanoleuca
ENSIPUG00000024973	-	83	61.499	ENSACIG00000018079	rad54l2	82	61.499	Amphilophus_citrinellus
ENSIPUG00000024973	-	80	66.667	ENSACIG00000015932	-	86	63.560	Amphilophus_citrinellus
ENSIPUG00000024973	-	97	60.015	ENSAOCG00000022380	-	96	58.554	Amphiprion_ocellaris
ENSIPUG00000024973	-	95	57.718	ENSATEG00000009346	rad54l2	90	58.962	Anabas_testudineus
ENSIPUG00000024973	-	95	60.958	ENSATEG00000006641	-	95	59.958	Anabas_testudineus
ENSIPUG00000024973	-	98	55.765	ENSAPLG00000002121	RAD54L2	88	59.091	Anas_platyrhynchos
ENSIPUG00000024973	-	86	59.413	ENSACAG00000015883	RAD54L2	92	59.576	Anolis_carolinensis
ENSIPUG00000024973	-	96	53.193	ENSANAG00000025396	RAD54L2	84	55.495	Aotus_nancymaae
ENSIPUG00000024973	-	94	56.877	ENSACLG00000019111	rad54l2	86	61.414	Astatotilapia_calliptera
ENSIPUG00000024973	-	96	59.364	ENSACLG00000018296	-	92	59.884	Astatotilapia_calliptera
ENSIPUG00000024973	-	90	59.793	ENSAMXG00000013807	rad54l2	84	59.494	Astyanax_mexicanus
ENSIPUG00000024973	-	96	53.348	ENSBTAG00000032253	RAD54L2	85	55.730	Bos_taurus
ENSIPUG00000024973	-	51	47.002	WBGene00007761	rad-26	73	47.002	Caenorhabditis_elegans
ENSIPUG00000024973	-	96	53.241	ENSCJAG00000005575	RAD54L2	88	56.396	Callithrix_jacchus
ENSIPUG00000024973	-	97	53.107	ENSCAFG00000010120	RAD54L2	84	55.730	Canis_familiaris
ENSIPUG00000024973	-	97	53.107	ENSCAFG00020022320	RAD54L2	92	53.035	Canis_lupus_dingo
ENSIPUG00000024973	-	96	53.717	ENSCHIG00000008830	RAD54L2	84	56.176	Capra_hircus
ENSIPUG00000024973	-	96	53.460	ENSTSYG00000013200	RAD54L2	84	55.695	Carlito_syrichta
ENSIPUG00000024973	-	76	62.940	ENSCAPG00000016465	RAD54L2	82	55.296	Cavia_aperea
ENSIPUG00000024973	-	97	52.933	ENSCPOG00000005941	RAD54L2	86	55.008	Cavia_porcellus
ENSIPUG00000024973	-	83	55.199	ENSCCAG00000024465	RAD54L2	80	57.987	Cebus_capucinus
ENSIPUG00000024973	-	97	53.013	ENSCATG00000039891	RAD54L2	87	55.178	Cercocebus_atys
ENSIPUG00000024973	-	97	53.042	ENSCLAG00000008059	RAD54L2	92	52.865	Chinchilla_lanigera
ENSIPUG00000024973	-	97	53.085	ENSCSAG00000014027	RAD54L2	86	55.170	Chlorocebus_sabaeus
ENSIPUG00000024973	-	89	59.531	ENSCPBG00000016624	RAD54L2	87	59.453	Chrysemys_picta_bellii
ENSIPUG00000024973	-	74	48.112	ENSCING00000009208	-	95	48.485	Ciona_intestinalis
ENSIPUG00000024973	-	97	52.903	ENSCANG00000036093	RAD54L2	87	55.058	Colobus_angolensis_palliatus
ENSIPUG00000024973	-	94	53.881	ENSCGRG00000007921	Rad54l2	84	55.950	Cricetulus_griseus_crigri
ENSIPUG00000024973	-	86	64.115	ENSCSEG00000006115	-	92	64.069	Cynoglossus_semilaevis
ENSIPUG00000024973	-	87	59.229	ENSCSEG00000001740	rad54l2	80	59.132	Cynoglossus_semilaevis
ENSIPUG00000024973	-	88	63.296	ENSCVAG00000005376	-	98	57.406	Cyprinodon_variegatus
ENSIPUG00000024973	-	94	57.357	ENSCVAG00000017887	rad54l2	73	63.876	Cyprinodon_variegatus
ENSIPUG00000024973	-	79	65.896	ENSDARG00000063031	rad54l2	78	65.085	Danio_rerio
ENSIPUG00000024973	-	97	53.391	ENSDNOG00000017359	RAD54L2	87	56.094	Dasypus_novemcinctus
ENSIPUG00000024973	-	88	61.423	ENSDORG00000000651	Rad54l2	91	60.580	Dipodomys_ordii
ENSIPUG00000024973	-	79	46.180	FBgn0034976	CG4049	66	53.521	Drosophila_melanogaster
ENSIPUG00000024973	-	94	53.511	ENSETEG00000013290	RAD54L2	91	55.829	Echinops_telfairi
ENSIPUG00000024973	-	75	52.908	ENSEBUG00000001591	rad54l2	76	52.908	Eptatretus_burgeri
ENSIPUG00000024973	-	96	53.348	ENSEASG00005012868	RAD54L2	84	55.651	Equus_asinus_asinus
ENSIPUG00000024973	-	96	53.382	ENSECAG00000014759	RAD54L2	86	55.247	Equus_caballus
ENSIPUG00000024973	-	75	72.222	ENSEEUG00000001759	RAD54L2	77	72.222	Erinaceus_europaeus
ENSIPUG00000024973	-	96	60.883	ENSELUG00000011246	RAD54L2	96	59.797	Esox_lucius
ENSIPUG00000024973	-	96	53.348	ENSFCAG00000018563	RAD54L2	84	55.730	Felis_catus
ENSIPUG00000024973	-	87	59.392	ENSFALG00000008938	RAD54L2	92	59.472	Ficedula_albicollis
ENSIPUG00000024973	-	97	52.903	ENSFDAG00000017084	RAD54L2	86	54.861	Fukomys_damarensis
ENSIPUG00000024973	-	98	55.451	ENSFHEG00000023241	rad54l2	75	62.353	Fundulus_heteroclitus
ENSIPUG00000024973	-	89	62.708	ENSFHEG00000017845	-	94	59.020	Fundulus_heteroclitus
ENSIPUG00000024973	-	87	60.446	ENSGMOG00000010674	rad54l2	98	56.818	Gadus_morhua
ENSIPUG00000024973	-	89	57.903	ENSGALG00000003243	RAD54L2	86	58.243	Gallus_gallus
ENSIPUG00000024973	-	97	55.564	ENSGAFG00000021535	rad54l2	77	63.736	Gambusia_affinis
ENSIPUG00000024973	-	88	62.401	ENSGAFG00000002396	-	96	58.725	Gambusia_affinis
ENSIPUG00000024973	-	88	62.682	ENSGACG00000005642	-	96	62.763	Gasterosteus_aculeatus
ENSIPUG00000024973	-	97	55.029	ENSGACG00000001558	rad54l2	99	54.519	Gasterosteus_aculeatus
ENSIPUG00000024973	-	89	59.184	ENSGAGG00000020971	RAD54L2	90	59.535	Gopherus_agassizii
ENSIPUG00000024973	-	96	53.348	ENSGGOG00000010032	RAD54L2	85	55.573	Gorilla_gorilla
ENSIPUG00000024973	-	94	57.217	ENSHBUG00000012480	rad54l2	85	61.637	Haplochromis_burtoni
ENSIPUG00000024973	-	96	59.508	ENSHBUG00000018930	-	92	60.029	Haplochromis_burtoni
ENSIPUG00000024973	-	97	52.794	ENSHGLG00000012116	RAD54L2	86	55.015	Heterocephalus_glaber_female
ENSIPUG00000024973	-	97	52.794	ENSHGLG00100007205	RAD54L2	86	55.015	Heterocephalus_glaber_male
ENSIPUG00000024973	-	87	59.065	ENSHCOG00000007601	rad54l2	90	54.676	Hippocampus_comes
ENSIPUG00000024973	-	97	58.184	ENSHCOG00000006741	-	95	58.184	Hippocampus_comes
ENSIPUG00000024973	-	96	53.164	ENSSTOG00000010014	RAD54L2	85	55.599	Ictidomys_tridecemlineatus
ENSIPUG00000024973	-	96	53.280	ENSJJAG00000014332	Rad54l2	84	55.582	Jaculus_jaculus
ENSIPUG00000024973	-	95	59.664	ENSKMAG00000002931	-	95	57.869	Kryptolebias_marmoratus
ENSIPUG00000024973	-	97	54.941	ENSKMAG00000001976	rad54l2	96	54.392	Kryptolebias_marmoratus
ENSIPUG00000024973	-	87	60.824	ENSLBEG00000008534	-	96	60.824	Labrus_bergylta
ENSIPUG00000024973	-	97	56.046	ENSLBEG00000018779	rad54l2	86	59.318	Labrus_bergylta
ENSIPUG00000024973	-	96	52.202	ENSLACG00000016004	RAD54L2	96	50.974	Latimeria_chalumnae
ENSIPUG00000024973	-	72	67.936	ENSLOCG00000014222	rad54l2	95	67.662	Lepisosteus_oculatus
ENSIPUG00000024973	-	97	53.507	ENSLAFG00000005966	RAD54L2	84	56.009	Loxodonta_africana
ENSIPUG00000024973	-	97	53.013	ENSMFAG00000041836	RAD54L2	87	55.178	Macaca_fascicularis
ENSIPUG00000024973	-	97	53.013	ENSMMUG00000012002	RAD54L2	86	55.093	Macaca_mulatta
ENSIPUG00000024973	-	97	53.013	ENSMNEG00000035063	RAD54L2	88	55.178	Macaca_nemestrina
ENSIPUG00000024973	-	97	53.013	ENSMLEG00000034668	RAD54L2	87	55.178	Mandrillus_leucophaeus
ENSIPUG00000024973	-	98	55.897	ENSMAMG00000023761	rad54l2	91	56.286	Mastacembelus_armatus
ENSIPUG00000024973	-	95	60.358	ENSMAMG00000015321	-	100	59.133	Mastacembelus_armatus
ENSIPUG00000024973	-	96	59.364	ENSMZEG00005021308	-	92	59.884	Maylandia_zebra
ENSIPUG00000024973	-	94	57.251	ENSMZEG00005012584	rad54l2	93	55.974	Maylandia_zebra
ENSIPUG00000024973	-	89	58.125	ENSMGAG00000002911	RAD54L2	86	57.919	Meleagris_gallopavo
ENSIPUG00000024973	-	74	62.086	ENSMAUG00000011651	Rad54l2	91	62.086	Mesocricetus_auratus
ENSIPUG00000024973	-	96	53.207	ENSMICG00000002777	RAD54L2	93	53.061	Microcebus_murinus
ENSIPUG00000024973	-	96	53.353	ENSMOCG00000022448	Rad54l2	86	55.660	Microtus_ochrogaster
ENSIPUG00000024973	-	86	63.479	ENSMMOG00000016901	-	96	60.090	Mola_mola
ENSIPUG00000024973	-	83	60.786	ENSMMOG00000021709	rad54l2	87	58.151	Mola_mola
ENSIPUG00000024973	-	88	59.230	ENSMODG00000011850	RAD54L2	90	59.230	Monodelphis_domestica
ENSIPUG00000024973	-	85	61.878	ENSMALG00000015084	-	91	69.077	Monopterus_albus
ENSIPUG00000024973	-	96	53.061	MGP_CAROLIEiJ_G0032634	Rad54l2	91	52.915	Mus_caroli
ENSIPUG00000024973	-	96	53.061	ENSMUSG00000040661	Rad54l2	91	52.915	Mus_musculus
ENSIPUG00000024973	-	96	53.095	MGP_PahariEiJ_G0015502	Rad54l2	91	52.950	Mus_pahari
ENSIPUG00000024973	-	96	53.061	MGP_SPRETEiJ_G0033779	Rad54l2	91	52.915	Mus_spretus
ENSIPUG00000024973	-	96	53.416	ENSMPUG00000011865	RAD54L2	84	55.799	Mustela_putorius_furo
ENSIPUG00000024973	-	96	53.579	ENSMLUG00000004605	RAD54L2	91	53.579	Myotis_lucifugus
ENSIPUG00000024973	-	96	53.678	ENSNGAG00000015629	Rad54l2	84	56.009	Nannospalax_galili
ENSIPUG00000024973	-	96	59.436	ENSNBRG00000022847	-	92	60.304	Neolamprologus_brichardi
ENSIPUG00000024973	-	85	61.702	ENSNBRG00000001937	rad54l2	86	60.691	Neolamprologus_brichardi
ENSIPUG00000024973	-	96	53.421	ENSNLEG00000007038	RAD54L2	86	55.651	Nomascus_leucogenys
ENSIPUG00000024973	-	84	64.815	ENSMEUG00000009835	RAD54L2	86	64.815	Notamacropus_eugenii
ENSIPUG00000024973	-	95	53.402	ENSODEG00000018266	RAD54L2	86	55.085	Octodon_degus
ENSIPUG00000024973	-	96	56.745	ENSONIG00000014468	rad54l2	95	55.571	Oreochromis_niloticus
ENSIPUG00000024973	-	96	60.453	ENSONIG00000001663	-	94	60.290	Oreochromis_niloticus
ENSIPUG00000024973	-	96	56.382	ENSOANG00000012793	RAD54L2	88	58.718	Ornithorhynchus_anatinus
ENSIPUG00000024973	-	96	52.980	ENSOCUG00000017577	RAD54L2	91	52.911	Oryctolagus_cuniculus
ENSIPUG00000024973	-	96	58.515	ENSORLG00000002714	-	92	59.055	Oryzias_latipes
ENSIPUG00000024973	-	89	58.387	ENSORLG00000002276	rad54l2	95	54.248	Oryzias_latipes
ENSIPUG00000024973	-	95	58.358	ENSORLG00020019256	-	92	58.729	Oryzias_latipes_hni
ENSIPUG00000024973	-	98	53.678	ENSORLG00020003470	rad54l2	96	53.937	Oryzias_latipes_hni
ENSIPUG00000024973	-	89	58.214	ENSORLG00015021530	rad54l2	95	53.825	Oryzias_latipes_hsok
ENSIPUG00000024973	-	95	58.553	ENSORLG00015013408	-	95	57.593	Oryzias_latipes_hsok
ENSIPUG00000024973	-	93	56.863	ENSOMEG00000005597	rad54l2	91	55.548	Oryzias_melastigma
ENSIPUG00000024973	-	96	58.676	ENSOMEG00000008216	-	92	59.467	Oryzias_melastigma
ENSIPUG00000024973	-	80	55.363	ENSOGAG00000012442	RAD54L2	97	55.286	Otolemur_garnettii
ENSIPUG00000024973	-	96	53.493	ENSOARG00000007264	RAD54L2	84	55.931	Ovis_aries
ENSIPUG00000024973	-	96	53.348	ENSPPAG00000038472	RAD54L2	85	55.573	Pan_paniscus
ENSIPUG00000024973	-	96	53.348	ENSPPRG00000010212	RAD54L2	84	55.730	Panthera_pardus
ENSIPUG00000024973	-	96	53.348	ENSPTIG00000002240	RAD54L2	84	55.730	Panthera_tigris_altaica
ENSIPUG00000024973	-	96	53.348	ENSPTRG00000014974	RAD54L2	85	55.573	Pan_troglodytes
ENSIPUG00000024973	-	97	53.013	ENSPANG00000000857	RAD54L2	87	55.178	Papio_anubis
ENSIPUG00000024973	-	98	59.564	ENSPKIG00000001065	rad54l2	97	59.400	Paramormyrops_kingsleyae
ENSIPUG00000024973	-	73	64.321	ENSPSIG00000014346	RAD54L2	91	64.516	Pelodiscus_sinensis
ENSIPUG00000024973	-	75	63.048	ENSPMGG00000002208	rad54l2	83	63.048	Periophthalmus_magnuspinnatus
ENSIPUG00000024973	-	96	59.836	ENSPMGG00000000641	-	99	58.807	Periophthalmus_magnuspinnatus
ENSIPUG00000024973	-	96	53.241	ENSPEMG00000012051	Rad54l2	84	55.617	Peromyscus_maniculatus_bairdii
ENSIPUG00000024973	-	80	62.402	ENSPCIG00000018143	RAD54L2	85	62.402	Phascolarctos_cinereus
ENSIPUG00000024973	-	97	55.556	ENSPFOG00000018644	rad54l2	91	55.379	Poecilia_formosa
ENSIPUG00000024973	-	96	59.883	ENSPFOG00000000197	-	96	58.322	Poecilia_formosa
ENSIPUG00000024973	-	89	62.855	ENSPLAG00000013908	-	97	58.873	Poecilia_latipinna
ENSIPUG00000024973	-	97	54.978	ENSPLAG00000006015	rad54l2	92	53.919	Poecilia_latipinna
ENSIPUG00000024973	-	97	55.700	ENSPMEG00000021535	rad54l2	91	55.523	Poecilia_mexicana
ENSIPUG00000024973	-	96	59.414	ENSPMEG00000009878	-	97	58.246	Poecilia_mexicana
ENSIPUG00000024973	-	96	59.882	ENSPREG00000013377	RAD54L2	96	58.807	Poecilia_reticulata
ENSIPUG00000024973	-	97	55.167	ENSPREG00000008628	rad54l2	100	54.625	Poecilia_reticulata
ENSIPUG00000024973	-	96	53.348	ENSPPYG00000013831	RAD54L2	87	55.573	Pongo_abelii
ENSIPUG00000024973	-	78	56.299	ENSPCAG00000011952	RAD54L2	81	56.299	Procavia_capensis
ENSIPUG00000024973	-	97	53.107	ENSPCOG00000015983	RAD54L2	92	52.886	Propithecus_coquereli
ENSIPUG00000024973	-	88	59.595	ENSPNYG00000020693	rad54l2	85	61.440	Pundamilia_nyererei
ENSIPUG00000024973	-	96	59.436	ENSPNYG00000011435	-	92	59.957	Pundamilia_nyererei
ENSIPUG00000024973	-	99	71.939	ENSPNAG00000011583	-	100	70.601	Pygocentrus_nattereri
ENSIPUG00000024973	-	87	61.079	ENSPNAG00000006451	rad54l2	84	60.783	Pygocentrus_nattereri
ENSIPUG00000024973	-	72	61.416	ENSRNOG00000049489	LOC102552166	91	61.416	Rattus_norvegicus
ENSIPUG00000024973	-	96	50.584	ENSRNOG00000013570	Rad54l2	85	52.426	Rattus_norvegicus
ENSIPUG00000024973	-	97	52.975	ENSRBIG00000032434	RAD54L2	94	55.819	Rhinopithecus_bieti
ENSIPUG00000024973	-	96	53.353	ENSRROG00000042309	RAD54L2	86	55.582	Rhinopithecus_roxellana
ENSIPUG00000024973	-	96	53.275	ENSSBOG00000002139	RAD54L2	84	55.495	Saimiri_boliviensis_boliviensis
ENSIPUG00000024973	-	89	59.207	ENSSHAG00000008604	RAD54L2	87	59.207	Sarcophilus_harrisii
ENSIPUG00000024973	-	99	61.021	ENSSFOG00015019014	rad54l2	100	59.945	Scleropages_formosus
ENSIPUG00000024973	-	87	59.457	ENSSMAG00000020933	rad54l2	81	59.457	Scophthalmus_maximus
ENSIPUG00000024973	-	96	59.420	ENSSMAG00000009978	-	95	58.647	Scophthalmus_maximus
ENSIPUG00000024973	-	90	59.059	ENSSDUG00000014268	rad54l2	85	61.000	Seriola_dumerili
ENSIPUG00000024973	-	95	59.782	ENSSDUG00000016711	-	93	60.430	Seriola_dumerili
ENSIPUG00000024973	-	95	59.604	ENSSLDG00000023388	-	97	60.072	Seriola_lalandi_dorsalis
ENSIPUG00000024973	-	90	58.948	ENSSLDG00000023959	rad54l2	87	60.213	Seriola_lalandi_dorsalis
ENSIPUG00000024973	-	97	56.287	ENSSPAG00000016532	rad54l2	84	60.180	Stegastes_partitus
ENSIPUG00000024973	-	94	60.898	ENSSPAG00000006371	-	98	60.534	Stegastes_partitus
ENSIPUG00000024973	-	96	53.270	ENSSSCG00000011425	RAD54L2	84	55.887	Sus_scrofa
ENSIPUG00000024973	-	89	58.014	ENSTGUG00000004888	RAD54L2	86	58.210	Taeniopygia_guttata
ENSIPUG00000024973	-	95	59.317	ENSTRUG00000011066	-	95	58.621	Takifugu_rubripes
ENSIPUG00000024973	-	87	58.607	ENSTRUG00000013962	rad54l2	84	56.317	Takifugu_rubripes
ENSIPUG00000024973	-	79	65.811	ENSTNIG00000006049	-	99	66.062	Tetraodon_nigroviridis
ENSIPUG00000024973	-	79	62.625	ENSTNIG00000014694	rad54l2	98	61.033	Tetraodon_nigroviridis
ENSIPUG00000024973	-	86	55.740	ENSTBEG00000003377	RAD54L2	84	58.273	Tupaia_belangeri
ENSIPUG00000024973	-	96	54.478	ENSUAMG00000020891	RAD54L2	88	56.822	Ursus_americanus
ENSIPUG00000024973	-	96	53.066	ENSUMAG00000021678	RAD54L2	79	62.316	Ursus_maritimus
ENSIPUG00000024973	-	97	53.107	ENSVVUG00000026874	RAD54L2	87	55.730	Vulpes_vulpes
ENSIPUG00000024973	-	95	55.196	ENSXETG00000000070	rad54l2	93	54.505	Xenopus_tropicalis
ENSIPUG00000024973	-	96	59.074	ENSXCOG00000002848	-	99	57.676	Xiphophorus_couchianus
ENSIPUG00000024973	-	79	60.275	ENSXCOG00000004961	rad54l2	75	60.329	Xiphophorus_couchianus
ENSIPUG00000024973	-	96	59.897	ENSXMAG00000019370	-	96	58.766	Xiphophorus_maculatus
ENSIPUG00000024973	-	79	64.044	ENSXMAG00000017182	rad54l2	100	55.669	Xiphophorus_maculatus