EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000025008 (Gene tree)
Gene ID: 108271054
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 19472 bases
Position: chr10:15421352-15440823
Accession: 108271054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037388	Surp	PF01805.20	2.1e-17	1	1
ENSIPUP00000037390	Surp	PF01805.20	2.1e-17	1	1
ENSIPUP00000037386	Surp	PF01805.20	2.1e-17	1	1
ENSIPUP00000037388	G-patch	PF01585.23	2.8e-12	1	1
ENSIPUP00000037390	G-patch	PF01585.23	2.9e-12	1	1
ENSIPUP00000037386	G-patch	PF01585.23	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038845	-	7814	XM_017478266	ENSIPUP00000037386	917 (aa)	XP_017333755	A0A2D0RUW7
ENSIPUT00000038847	-	7778	XM_017478268	ENSIPUP00000037388	905 (aa)	XP_017333757	A0A2D0RTD1
ENSIPUT00000038849	-	2736	-	ENSIPUP00000037390	911 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000025008's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000025008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000025008	cherp	99	68.099	ENSG00000085872	CHERP	99	68.319	Homo_sapiens
ENSIPUG00000025008	cherp	61	70.088	ENSAPOG00000009646	cherp	99	70.141	Acanthochromis_polyacanthus
ENSIPUG00000025008	cherp	98	69.414	ENSAMEG00000010048	CHERP	79	71.214	Ailuropoda_melanoleuca
ENSIPUG00000025008	cherp	100	71.831	ENSAOCG00000017846	cherp	100	71.568	Amphiprion_ocellaris
ENSIPUG00000025008	cherp	100	71.800	ENSAPEG00000021128	cherp	100	71.861	Amphiprion_percula
ENSIPUG00000025008	cherp	100	71.957	ENSATEG00000006341	cherp	99	72.174	Anabas_testudineus
ENSIPUG00000025008	cherp	76	69.061	ENSAPLG00000010773	CHERP	99	67.253	Anas_platyrhynchos
ENSIPUG00000025008	cherp	99	67.197	ENSANAG00000024284	CHERP	99	67.306	Aotus_nancymaae
ENSIPUG00000025008	cherp	100	72.343	ENSACLG00000020053	cherp	79	77.579	Astatotilapia_calliptera
ENSIPUG00000025008	cherp	100	87.911	ENSAMXG00000021637	cherp	94	88.470	Astyanax_mexicanus
ENSIPUG00000025008	cherp	99	69.107	ENSBTAG00000005289	CHERP	99	68.851	Bos_taurus
ENSIPUG00000025008	cherp	99	67.304	ENSCJAG00000040462	CHERP	99	67.306	Callithrix_jacchus
ENSIPUG00000025008	cherp	99	68.206	ENSCAFG00000015671	CHERP	99	68.528	Canis_familiaris
ENSIPUG00000025008	cherp	85	85.000	ENSCAFG00020009941	CHERP	93	76.238	Canis_lupus_dingo
ENSIPUG00000025008	cherp	87	78.723	ENSCHIG00000013765	CHERP	96	78.723	Capra_hircus
ENSIPUG00000025008	cherp	89	63.484	ENSCAPG00000000910	CHERP	68	70.788	Cavia_aperea
ENSIPUG00000025008	cherp	99	67.663	ENSCPOG00000019949	CHERP	99	68.201	Cavia_porcellus
ENSIPUG00000025008	cherp	99	67.197	ENSCCAG00000031534	CHERP	99	67.306	Cebus_capucinus
ENSIPUG00000025008	cherp	99	67.091	ENSCATG00000031409	CHERP	99	67.306	Cercocebus_atys
ENSIPUG00000025008	cherp	88	68.100	ENSCLAG00000005484	CHERP	94	68.182	Chinchilla_lanigera
ENSIPUG00000025008	cherp	99	68.099	ENSCSAG00000005740	CHERP	99	68.427	Chlorocebus_sabaeus
ENSIPUG00000025008	cherp	100	68.162	ENSCPBG00000014970	CHERP	100	68.216	Chrysemys_picta_bellii
ENSIPUG00000025008	cherp	82	49.823	ENSCING00000004814	-	54	71.875	Ciona_intestinalis
ENSIPUG00000025008	cherp	64	49.458	ENSCSAVG00000002455	-	55	72.917	Ciona_savignyi
ENSIPUG00000025008	cherp	99	68.314	ENSCANG00000032053	CHERP	99	68.427	Colobus_angolensis_palliatus
ENSIPUG00000025008	cherp	99	67.302	ENSCGRG00001023316	Cherp	99	67.302	Cricetulus_griseus_chok1gshd
ENSIPUG00000025008	cherp	98	68.427	ENSCGRG00000015901	Cherp	99	68.501	Cricetulus_griseus_crigri
ENSIPUG00000025008	cherp	79	76.060	ENSCSEG00000019700	cherp	100	71.353	Cynoglossus_semilaevis
ENSIPUG00000025008	cherp	75	73.745	ENSCVAG00000003622	cherp	93	72.636	Cyprinodon_variegatus
ENSIPUG00000025008	cherp	100	80.528	ENSDARG00000021812	cherp	100	85.490	Danio_rerio
ENSIPUG00000025008	cherp	98	68.777	ENSDORG00000027623	Cherp	100	67.634	Dipodomys_ordii
ENSIPUG00000025008	cherp	76	76.339	ENSETEG00000019543	CHERP	83	74.449	Echinops_telfairi
ENSIPUG00000025008	cherp	52	75.000	ENSEBUG00000009109	cherp	50	75.000	Eptatretus_burgeri
ENSIPUG00000025008	cherp	99	68.636	ENSEASG00005000428	CHERP	92	68.382	Equus_asinus_asinus
ENSIPUG00000025008	cherp	99	68.636	ENSECAG00000012713	CHERP	99	68.274	Equus_caballus
ENSIPUG00000025008	cherp	99	75.987	ENSELUG00000023026	cherp	80	79.917	Esox_lucius
ENSIPUG00000025008	cherp	99	67.625	ENSFCAG00000013172	CHERP	99	67.410	Felis_catus
ENSIPUG00000025008	cherp	79	69.973	ENSFALG00000013410	CHERP	86	67.849	Ficedula_albicollis
ENSIPUG00000025008	cherp	78	64.825	ENSFDAG00000015981	CHERP	100	61.889	Fukomys_damarensis
ENSIPUG00000025008	cherp	92	94.737	ENSFHEG00000009720	cherp	79	68.239	Fundulus_heteroclitus
ENSIPUG00000025008	cherp	79	74.694	ENSGMOG00000008654	cherp	99	71.010	Gadus_morhua
ENSIPUG00000025008	cherp	79	71.120	ENSGALG00000003824	CHERP	88	68.393	Gallus_gallus
ENSIPUG00000025008	cherp	99	70.354	ENSGACG00000002053	cherp	99	68.568	Gasterosteus_aculeatus
ENSIPUG00000025008	cherp	100	67.842	ENSGAGG00000014208	CHERP	100	67.892	Gopherus_agassizii
ENSIPUG00000025008	cherp	88	57.228	ENSGGOG00000016348	CHERP	95	57.109	Gorilla_gorilla
ENSIPUG00000025008	cherp	100	72.234	ENSHBUG00000007405	cherp	79	77.442	Haplochromis_burtoni
ENSIPUG00000025008	cherp	99	68.630	ENSHGLG00000002993	CHERP	99	68.958	Heterocephalus_glaber_female
ENSIPUG00000025008	cherp	50	73.731	ENSHGLG00100010390	CHERP	65	68.421	Heterocephalus_glaber_male
ENSIPUG00000025008	cherp	79	73.569	ENSHCOG00000007691	cherp	100	69.915	Hippocampus_comes
ENSIPUG00000025008	cherp	98	68.845	ENSSTOG00000012089	CHERP	99	68.581	Ictidomys_tridecemlineatus
ENSIPUG00000025008	cherp	99	61.175	ENSJJAG00000017982	Cherp	81	70.628	Jaculus_jaculus
ENSIPUG00000025008	cherp	100	71.351	ENSKMAG00000009101	cherp	100	70.550	Kryptolebias_marmoratus
ENSIPUG00000025008	cherp	78	73.517	ENSLBEG00000007586	cherp	91	72.702	Labrus_bergylta
ENSIPUG00000025008	cherp	79	68.538	ENSLACG00000018221	CHERP	99	66.807	Latimeria_chalumnae
ENSIPUG00000025008	cherp	100	78.051	ENSLOCG00000003654	cherp	100	77.814	Lepisosteus_oculatus
ENSIPUG00000025008	cherp	99	68.547	ENSLAFG00000009096	CHERP	100	68.764	Loxodonta_africana
ENSIPUG00000025008	cherp	99	67.091	ENSMFAG00000033267	CHERP	99	67.306	Macaca_fascicularis
ENSIPUG00000025008	cherp	99	65.605	ENSMMUG00000012958	CHERP	82	69.089	Macaca_mulatta
ENSIPUG00000025008	cherp	99	67.091	ENSMNEG00000004125	CHERP	99	67.306	Macaca_nemestrina
ENSIPUG00000025008	cherp	89	69.638	ENSMLEG00000044337	CHERP	99	69.638	Mandrillus_leucophaeus
ENSIPUG00000025008	cherp	100	72.078	ENSMAMG00000022269	cherp	79	76.146	Mastacembelus_armatus
ENSIPUG00000025008	cherp	100	72.234	ENSMZEG00005018014	cherp	79	77.442	Maylandia_zebra
ENSIPUG00000025008	cherp	68	72.063	ENSMGAG00000005571	CHERP	93	69.268	Meleagris_gallopavo
ENSIPUG00000025008	cherp	99	67.410	ENSMAUG00000015856	Cherp	99	67.338	Mesocricetus_auratus
ENSIPUG00000025008	cherp	100	68.951	ENSMICG00000004577	CHERP	100	68.951	Microcebus_murinus
ENSIPUG00000025008	cherp	99	68.348	ENSMOCG00000014697	Cherp	99	68.670	Microtus_ochrogaster
ENSIPUG00000025008	cherp	99	72.144	ENSMMOG00000008525	cherp	77	75.137	Mola_mola
ENSIPUG00000025008	cherp	99	67.511	ENSMODG00000014938	CHERP	100	66.983	Monodelphis_domestica
ENSIPUG00000025008	cherp	100	70.224	ENSMALG00000020688	cherp	79	74.697	Monopterus_albus
ENSIPUG00000025008	cherp	99	67.910	MGP_CAROLIEiJ_G0031220	Cherp	99	67.591	Mus_caroli
ENSIPUG00000025008	cherp	79	69.353	ENSMUSG00000052488	Cherp	99	67.375	Mus_musculus
ENSIPUG00000025008	cherp	99	67.991	MGP_PahariEiJ_G0021685	Cherp	99	67.918	Mus_pahari
ENSIPUG00000025008	cherp	99	67.949	MGP_SPRETEiJ_G0032341	Cherp	99	67.415	Mus_spretus
ENSIPUG00000025008	cherp	78	70.565	ENSMPUG00000016023	CHERP	77	70.628	Mustela_putorius_furo
ENSIPUG00000025008	cherp	98	62.128	ENSMLUG00000013881	CHERP	99	63.666	Myotis_lucifugus
ENSIPUG00000025008	cherp	99	67.831	ENSNGAG00000023323	Cherp	99	67.407	Nannospalax_galili
ENSIPUG00000025008	cherp	100	69.817	ENSNBRG00000001914	cherp	81	76.152	Neolamprologus_brichardi
ENSIPUG00000025008	cherp	99	68.099	ENSNLEG00000005536	CHERP	99	68.427	Nomascus_leucogenys
ENSIPUG00000025008	cherp	91	79.522	ENSMEUG00000010840	CHERP	91	78.425	Notamacropus_eugenii
ENSIPUG00000025008	cherp	78	70.556	ENSODEG00000001528	CHERP	81	71.332	Octodon_degus
ENSIPUG00000025008	cherp	100	71.765	ENSONIG00000007686	cherp	79	76.892	Oreochromis_niloticus
ENSIPUG00000025008	cherp	100	68.817	ENSORLG00000000138	cherp	100	70.563	Oryzias_latipes
ENSIPUG00000025008	cherp	100	68.602	ENSORLG00020013142	cherp	100	70.346	Oryzias_latipes_hni
ENSIPUG00000025008	cherp	100	68.495	ENSORLG00015008911	cherp	100	70.130	Oryzias_latipes_hsok
ENSIPUG00000025008	cherp	99	69.081	ENSOMEG00000016947	cherp	99	70.620	Oryzias_melastigma
ENSIPUG00000025008	cherp	99	67.131	ENSOGAG00000005834	CHERP	99	67.345	Otolemur_garnettii
ENSIPUG00000025008	cherp	78	62.819	ENSOARG00000018876	CHERP	78	61.796	Ovis_aries
ENSIPUG00000025008	cherp	99	67.091	ENSPPAG00000029195	CHERP	99	67.199	Pan_paniscus
ENSIPUG00000025008	cherp	99	67.625	ENSPPRG00000003275	CHERP	99	67.410	Panthera_pardus
ENSIPUG00000025008	cherp	99	68.099	ENSPTRG00000010647	CHERP	99	68.319	Pan_troglodytes
ENSIPUG00000025008	cherp	99	67.091	ENSPANG00000011698	CHERP	99	67.306	Papio_anubis
ENSIPUG00000025008	cherp	78	70.645	ENSPKIG00000000423	cherp	80	71.625	Paramormyrops_kingsleyae
ENSIPUG00000025008	cherp	99	67.382	ENSPSIG00000011974	CHERP	100	67.525	Pelodiscus_sinensis
ENSIPUG00000025008	cherp	98	68.000	ENSPMGG00000023606	cherp	89	83.146	Periophthalmus_magnuspinnatus
ENSIPUG00000025008	cherp	99	67.334	ENSPEMG00000011238	Cherp	99	67.229	Peromyscus_maniculatus_bairdii
ENSIPUG00000025008	cherp	99	68.365	ENSPCIG00000019615	CHERP	95	67.622	Phascolarctos_cinereus
ENSIPUG00000025008	cherp	99	71.460	ENSPFOG00000016899	cherp	100	71.550	Poecilia_formosa
ENSIPUG00000025008	cherp	87	72.466	ENSPMEG00000002214	cherp	76	75.164	Poecilia_mexicana
ENSIPUG00000025008	cherp	99	71.806	ENSPREG00000020774	cherp	99	71.209	Poecilia_reticulata
ENSIPUG00000025008	cherp	99	66.234	ENSPPYG00000009691	CHERP	99	66.341	Pongo_abelii
ENSIPUG00000025008	cherp	99	64.558	ENSPCAG00000001337	CHERP	90	77.660	Procavia_capensis
ENSIPUG00000025008	cherp	68	81.944	ENSPCOG00000022788	CHERP	98	91.379	Propithecus_coquereli
ENSIPUG00000025008	cherp	99	64.125	ENSPVAG00000004320	CHERP	90	77.660	Pteropus_vampyrus
ENSIPUG00000025008	cherp	100	72.126	ENSPNYG00000003942	cherp	79	77.304	Pundamilia_nyererei
ENSIPUG00000025008	cherp	100	88.242	ENSPNAG00000017179	cherp	100	88.242	Pygocentrus_nattereri
ENSIPUG00000025008	cherp	99	67.910	ENSRNOG00000012323	Cherp	99	67.697	Rattus_norvegicus
ENSIPUG00000025008	cherp	99	68.172	ENSRBIG00000038621	CHERP	99	68.568	Rhinopithecus_bieti
ENSIPUG00000025008	cherp	99	67.091	ENSRROG00000040770	CHERP	99	67.306	Rhinopithecus_roxellana
ENSIPUG00000025008	cherp	99	67.197	ENSSBOG00000014492	CHERP	99	67.306	Saimiri_boliviensis_boliviensis
ENSIPUG00000025008	cherp	98	67.945	ENSSHAG00000010752	CHERP	99	66.740	Sarcophilus_harrisii
ENSIPUG00000025008	cherp	98	60.065	ENSSFOG00015008022	cherp	85	83.486	Scleropages_formosus
ENSIPUG00000025008	cherp	100	69.851	ENSSMAG00000005362	cherp	100	71.262	Scophthalmus_maximus
ENSIPUG00000025008	cherp	100	71.702	ENSSDUG00000019712	cherp	100	72.051	Seriola_dumerili
ENSIPUG00000025008	cherp	100	72.210	ENSSLDG00000012659	cherp	100	72.562	Seriola_lalandi_dorsalis
ENSIPUG00000025008	cherp	99	68.202	ENSSPUG00000008901	CHERP	99	68.053	Sphenodon_punctatus
ENSIPUG00000025008	cherp	100	72.373	ENSSPAG00000010681	cherp	100	71.970	Stegastes_partitus
ENSIPUG00000025008	cherp	99	68.966	ENSSSCG00000013860	CHERP	99	68.636	Sus_scrofa
ENSIPUG00000025008	cherp	79	69.652	ENSTGUG00000000680	CHERP	99	68.608	Taeniopygia_guttata
ENSIPUG00000025008	cherp	100	70.222	ENSTRUG00000007429	cherp	100	70.917	Takifugu_rubripes
ENSIPUG00000025008	cherp	99	70.044	ENSTNIG00000003363	cherp	80	74.521	Tetraodon_nigroviridis
ENSIPUG00000025008	cherp	88	66.003	ENSTTRG00000015006	CHERP	89	65.816	Tursiops_truncatus
ENSIPUG00000025008	cherp	99	64.332	ENSUAMG00000017295	CHERP	80	68.999	Ursus_americanus
ENSIPUG00000025008	cherp	67	71.947	ENSUMAG00000000965	CHERP	59	81.281	Ursus_maritimus
ENSIPUG00000025008	cherp	99	67.481	ENSVVUG00000016546	CHERP	99	67.125	Vulpes_vulpes
ENSIPUG00000025008	cherp	99	66.920	ENSXETG00000002072	cherp	97	67.756	Xenopus_tropicalis