EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000025084 (Gene tree)
Gene ID: 100528598
Gene Symbol: srp19
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11054 bases
Position: chr5:17429780-17440833
Accession: 100528598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037496	SRP19	PF01922.17	9.6e-29	1	1
ENSIPUP00000037498	SRP19	PF01922.17	7.4e-17	1	2
ENSIPUP00000037498	SRP19	PF01922.17	7.4e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038963	-	366	-	ENSIPUP00000037498	121 (aa)	-	-
ENSIPUT00000038961	-	4668	-	ENSIPUP00000037496	141 (aa)	-	E3TFP7

Gene Model

Click here to download ENSIPUG00000025084's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000025084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000025084	srp19	92	68.750	ENSG00000153037	SRP19	93	68.085	Homo_sapiens
ENSIPUG00000025084	srp19	94	84.211	ENSAPOG00000002199	srp19	92	83.969	Acanthochromis_polyacanthus
ENSIPUG00000025084	srp19	89	70.079	ENSAMEG00000012623	SRP19	86	69.841	Ailuropoda_melanoleuca
ENSIPUG00000025084	srp19	94	80.451	ENSACIG00000005082	srp19	92	80.153	Amphilophus_citrinellus
ENSIPUG00000025084	srp19	94	83.459	ENSAOCG00000002718	srp19	93	83.206	Amphiprion_ocellaris
ENSIPUG00000025084	srp19	94	83.459	ENSAPEG00000022170	srp19	93	83.206	Amphiprion_percula
ENSIPUG00000025084	srp19	94	84.211	ENSATEG00000012472	srp19	93	83.969	Anabas_testudineus
ENSIPUG00000025084	srp19	79	67.257	ENSAPLG00000002624	SRP19	91	67.257	Anas_platyrhynchos
ENSIPUG00000025084	srp19	93	64.662	ENSACAG00000007550	SRP19	91	64.662	Anolis_carolinensis
ENSIPUG00000025084	srp19	92	68.750	ENSANAG00000032576	-	90	68.468	Aotus_nancymaae
ENSIPUG00000025084	srp19	84	59.167	ENSANAG00000029862	-	87	64.211	Aotus_nancymaae
ENSIPUG00000025084	srp19	93	51.515	ENSANAG00000030287	-	89	52.033	Aotus_nancymaae
ENSIPUG00000025084	srp19	94	79.699	ENSACLG00000006259	srp19	93	79.389	Astatotilapia_calliptera
ENSIPUG00000025084	srp19	93	87.023	ENSAMXG00000043011	srp19	93	87.023	Astyanax_mexicanus
ENSIPUG00000025084	srp19	89	69.291	ENSBTAG00000012803	SRP19	88	69.048	Bos_taurus
ENSIPUG00000025084	srp19	82	47.458	WBGene00018159	F37F2.2	96	44.526	Caenorhabditis_elegans
ENSIPUG00000025084	srp19	86	50.820	ENSCJAG00000045531	-	78	50.806	Callithrix_jacchus
ENSIPUG00000025084	srp19	92	68.750	ENSCJAG00000038676	-	90	68.468	Callithrix_jacchus
ENSIPUG00000025084	srp19	89	69.291	ENSCAFG00000031549	SRP19	88	69.048	Canis_familiaris
ENSIPUG00000025084	srp19	84	69.167	ENSCAFG00020022437	-	92	69.672	Canis_lupus_dingo
ENSIPUG00000025084	srp19	92	66.964	ENSCAFG00020014267	-	88	69.048	Canis_lupus_dingo
ENSIPUG00000025084	srp19	65	67.391	ENSCAFG00020004285	-	84	68.085	Canis_lupus_dingo
ENSIPUG00000025084	srp19	89	69.291	ENSCHIG00000017551	SRP19	88	69.048	Capra_hircus
ENSIPUG00000025084	srp19	92	68.750	ENSTSYG00000007875	SRP19	90	68.468	Carlito_syrichta
ENSIPUG00000025084	srp19	81	58.974	ENSCPOG00000036806	SRP19	88	58.974	Cavia_porcellus
ENSIPUG00000025084	srp19	87	51.220	ENSCCAG00000029821	-	61	51.220	Cebus_capucinus
ENSIPUG00000025084	srp19	92	68.750	ENSCCAG00000035651	-	90	68.468	Cebus_capucinus
ENSIPUG00000025084	srp19	87	53.226	ENSCCAG00000023426	-	80	53.226	Cebus_capucinus
ENSIPUG00000025084	srp19	88	59.200	ENSCATG00000040513	-	78	59.843	Cercocebus_atys
ENSIPUG00000025084	srp19	92	61.607	ENSCATG00000039250	-	87	62.698	Cercocebus_atys
ENSIPUG00000025084	srp19	89	65.354	ENSCLAG00000016055	-	86	65.600	Chinchilla_lanigera
ENSIPUG00000025084	srp19	92	67.857	ENSCLAG00000004791	-	90	67.568	Chinchilla_lanigera
ENSIPUG00000025084	srp19	89	70.079	ENSCHOG00000013452	SRP19	88	69.841	Choloepus_hoffmanni
ENSIPUG00000025084	srp19	93	64.394	ENSCPBG00000013903	SRP19	92	64.394	Chrysemys_picta_bellii
ENSIPUG00000025084	srp19	92	69.643	ENSCGRG00001020510	Srp19	90	69.369	Cricetulus_griseus_chok1gshd
ENSIPUG00000025084	srp19	66	67.857	ENSCGRG00000010716	-	87	65.657	Cricetulus_griseus_crigri
ENSIPUG00000025084	srp19	84	63.025	ENSCGRG00000008542	-	91	62.712	Cricetulus_griseus_crigri
ENSIPUG00000025084	srp19	94	78.195	ENSCSEG00000010039	srp19	93	77.863	Cynoglossus_semilaevis
ENSIPUG00000025084	srp19	94	81.955	ENSCVAG00000017621	srp19	93	81.679	Cyprinodon_variegatus
ENSIPUG00000025084	srp19	93	80.916	ENSDARG00000035699	srp19	93	80.916	Danio_rerio
ENSIPUG00000025084	srp19	89	70.079	ENSDNOG00000013856	SRP19	88	69.841	Dasypus_novemcinctus
ENSIPUG00000025084	srp19	92	57.265	ENSDORG00000004746	Srp19	91	56.897	Dipodomys_ordii
ENSIPUG00000025084	srp19	87	49.180	FBgn0015298	Srp19	71	50.877	Drosophila_melanogaster
ENSIPUG00000025084	srp19	90	70.312	ENSETEG00000017132	SRP19	88	70.635	Echinops_telfairi
ENSIPUG00000025084	srp19	90	65.354	ENSEBUG00000006613	srp19	93	64.885	Eptatretus_burgeri
ENSIPUG00000025084	srp19	89	70.079	ENSEASG00005015182	SRP19	88	69.841	Equus_asinus_asinus
ENSIPUG00000025084	srp19	67	69.792	ENSECAG00000008895	SRP19	53	53.043	Equus_caballus
ENSIPUG00000025084	srp19	89	69.291	ENSEEUG00000007298	SRP19	88	69.048	Erinaceus_europaeus
ENSIPUG00000025084	srp19	93	78.626	ENSELUG00000007958	srp19	93	78.626	Esox_lucius
ENSIPUG00000025084	srp19	94	75.188	ENSELUG00000004594	srp19	93	74.809	Esox_lucius
ENSIPUG00000025084	srp19	92	68.750	ENSFCAG00000025895	SRP19	90	68.468	Felis_catus
ENSIPUG00000025084	srp19	92	68.750	ENSFDAG00000013543	SRP19	90	68.468	Fukomys_damarensis
ENSIPUG00000025084	srp19	94	81.203	ENSFHEG00000000493	srp19	93	80.916	Fundulus_heteroclitus
ENSIPUG00000025084	srp19	85	78.333	ENSGMOG00000003264	srp19	92	77.966	Gadus_morhua
ENSIPUG00000025084	srp19	89	66.667	ENSGALG00000000218	SRP19	91	64.885	Gallus_gallus
ENSIPUG00000025084	srp19	86	85.124	ENSGAFG00000015815	srp19	57	84.874	Gambusia_affinis
ENSIPUG00000025084	srp19	94	78.947	ENSGACG00000001093	srp19	89	78.626	Gasterosteus_aculeatus
ENSIPUG00000025084	srp19	93	64.394	ENSGAGG00000025305	SRP19	92	64.394	Gopherus_agassizii
ENSIPUG00000025084	srp19	90	79.688	ENSHBUG00000006131	srp19	88	79.365	Haplochromis_burtoni
ENSIPUG00000025084	srp19	92	67.857	ENSHGLG00000006075	SRP19	90	67.568	Heterocephalus_glaber_female
ENSIPUG00000025084	srp19	92	67.857	ENSHGLG00100015859	SRP19	90	67.568	Heterocephalus_glaber_male
ENSIPUG00000025084	srp19	94	72.932	ENSHCOG00000013231	srp19	93	72.727	Hippocampus_comes
ENSIPUG00000025084	srp19	92	68.750	ENSSTOG00000000348	SRP19	90	68.468	Ictidomys_tridecemlineatus
ENSIPUG00000025084	srp19	92	67.857	ENSJJAG00000017185	Srp19	90	67.568	Jaculus_jaculus
ENSIPUG00000025084	srp19	94	82.707	ENSKMAG00000011155	srp19	93	82.443	Kryptolebias_marmoratus
ENSIPUG00000025084	srp19	94	81.203	ENSLBEG00000026727	srp19	93	80.916	Labrus_bergylta
ENSIPUG00000025084	srp19	93	71.212	ENSLACG00000004459	SRP19	86	71.212	Latimeria_chalumnae
ENSIPUG00000025084	srp19	93	76.336	ENSLOCG00000010302	srp19	93	76.336	Lepisosteus_oculatus
ENSIPUG00000025084	srp19	89	70.079	ENSLAFG00000002564	SRP19	88	69.841	Loxodonta_africana
ENSIPUG00000025084	srp19	84	52.941	ENSMFAG00000040055	-	90	53.719	Macaca_fascicularis
ENSIPUG00000025084	srp19	84	63.866	ENSMFAG00000000554	-	95	59.292	Macaca_fascicularis
ENSIPUG00000025084	srp19	84	64.706	ENSMMUG00000049186	-	91	61.719	Macaca_mulatta
ENSIPUG00000025084	srp19	87	59.350	ENSMMUG00000032515	-	92	60.000	Macaca_mulatta
ENSIPUG00000025084	srp19	92	68.750	ENSMNEG00000038714	SRP19	90	68.468	Macaca_nemestrina
ENSIPUG00000025084	srp19	84	52.101	ENSMNEG00000040117	-	90	52.893	Macaca_nemestrina
ENSIPUG00000025084	srp19	94	81.955	ENSMAMG00000018346	srp19	92	81.679	Mastacembelus_armatus
ENSIPUG00000025084	srp19	94	79.699	ENSMZEG00005001765	srp19	93	79.389	Maylandia_zebra
ENSIPUG00000025084	srp19	84	67.500	ENSMGAG00000006762	SRP19	92	67.500	Meleagris_gallopavo
ENSIPUG00000025084	srp19	92	66.071	ENSMICG00000000399	SRP19	90	65.766	Microcebus_murinus
ENSIPUG00000025084	srp19	68	62.887	ENSMICG00000049202	-	89	63.636	Microcebus_murinus
ENSIPUG00000025084	srp19	92	69.643	ENSMOCG00000006534	Srp19	90	69.369	Microtus_ochrogaster
ENSIPUG00000025084	srp19	66	71.250	ENSMOCG00000010532	-	87	69.474	Microtus_ochrogaster
ENSIPUG00000025084	srp19	85	83.333	ENSMMOG00000010417	srp19	77	83.051	Mola_mola
ENSIPUG00000025084	srp19	93	68.182	ENSMODG00000013278	SRP19	92	68.182	Monodelphis_domestica
ENSIPUG00000025084	srp19	94	84.211	ENSMALG00000003858	srp19	93	83.969	Monopterus_albus
ENSIPUG00000025084	srp19	92	71.429	MGP_CAROLIEiJ_G0022086	Srp19	90	71.171	Mus_caroli
ENSIPUG00000025084	srp19	92	71.429	ENSMUSG00000014504	Srp19	90	71.171	Mus_musculus
ENSIPUG00000025084	srp19	92	71.429	MGP_PahariEiJ_G0018820	Srp19	90	71.171	Mus_pahari
ENSIPUG00000025084	srp19	92	71.429	MGP_SPRETEiJ_G0022998	Srp19	90	71.171	Mus_spretus
ENSIPUG00000025084	srp19	89	70.866	ENSMPUG00000012695	SRP19	86	70.635	Mustela_putorius_furo
ENSIPUG00000025084	srp19	87	66.129	ENSMLUG00000024549	-	89	66.129	Myotis_lucifugus
ENSIPUG00000025084	srp19	90	68.750	ENSMLUG00000014793	-	88	69.048	Myotis_lucifugus
ENSIPUG00000025084	srp19	92	68.750	ENSNGAG00000003440	-	90	68.468	Nannospalax_galili
ENSIPUG00000025084	srp19	87	64.228	ENSNGAG00000014524	-	95	64.228	Nannospalax_galili
ENSIPUG00000025084	srp19	89	61.905	ENSNLEG00000035364	-	87	65.263	Nomascus_leucogenys
ENSIPUG00000025084	srp19	84	69.748	ENSMEUG00000012529	SRP19	92	69.748	Notamacropus_eugenii
ENSIPUG00000025084	srp19	82	70.085	ENSOPRG00000010549	SRP19	92	69.748	Ochotona_princeps
ENSIPUG00000025084	srp19	66	71.250	ENSODEG00000005538	-	83	69.474	Octodon_degus
ENSIPUG00000025084	srp19	87	66.935	ENSODEG00000019119	-	88	66.667	Octodon_degus
ENSIPUG00000025084	srp19	87	56.911	ENSODEG00000013862	-	86	58.400	Octodon_degus
ENSIPUG00000025084	srp19	94	79.699	ENSONIG00000000542	srp19	93	79.389	Oreochromis_niloticus
ENSIPUG00000025084	srp19	93	65.909	ENSOANG00000011139	SRP19	76	65.909	Ornithorhynchus_anatinus
ENSIPUG00000025084	srp19	89	69.531	ENSOCUG00000015639	SRP19	88	69.291	Oryctolagus_cuniculus
ENSIPUG00000025084	srp19	94	79.699	ENSORLG00000028267	srp19	94	79.389	Oryzias_latipes
ENSIPUG00000025084	srp19	94	79.699	ENSORLG00020015201	srp19	94	79.389	Oryzias_latipes_hni
ENSIPUG00000025084	srp19	94	79.699	ENSORLG00015007525	srp19	94	79.389	Oryzias_latipes_hsok
ENSIPUG00000025084	srp19	94	78.947	ENSOMEG00000009178	srp19	94	78.626	Oryzias_melastigma
ENSIPUG00000025084	srp19	89	69.291	ENSOGAG00000008579	SRP19	88	69.048	Otolemur_garnettii
ENSIPUG00000025084	srp19	90	67.969	ENSOARG00000016066	SRP19	88	68.254	Ovis_aries
ENSIPUG00000025084	srp19	92	68.750	ENSPPAG00000037062	SRP19	90	68.468	Pan_paniscus
ENSIPUG00000025084	srp19	92	68.750	ENSPPRG00000015591	SRP19	90	68.468	Panthera_pardus
ENSIPUG00000025084	srp19	92	68.750	ENSPTIG00000021474	SRP19	90	68.468	Panthera_tigris_altaica
ENSIPUG00000025084	srp19	92	68.750	ENSPTRG00000017136	SRP19	90	68.468	Pan_troglodytes
ENSIPUG00000025084	srp19	92	68.750	ENSPANG00000004370	-	90	68.468	Papio_anubis
ENSIPUG00000025084	srp19	90	61.719	ENSPANG00000034740	-	87	61.905	Papio_anubis
ENSIPUG00000025084	srp19	94	73.684	ENSPKIG00000018671	srp19	93	73.282	Paramormyrops_kingsleyae
ENSIPUG00000025084	srp19	84	67.500	ENSPSIG00000013811	SRP19	92	67.500	Pelodiscus_sinensis
ENSIPUG00000025084	srp19	94	76.692	ENSPMGG00000015313	srp19	93	76.336	Periophthalmus_magnuspinnatus
ENSIPUG00000025084	srp19	85	71.074	ENSPEMG00000004412	-	88	70.833	Peromyscus_maniculatus_bairdii
ENSIPUG00000025084	srp19	95	60.448	ENSPMAG00000002685	srp19	93	61.832	Petromyzon_marinus
ENSIPUG00000025084	srp19	93	68.182	ENSPCIG00000010250	SRP19	92	68.182	Phascolarctos_cinereus
ENSIPUG00000025084	srp19	94	83.459	ENSPFOG00000015887	srp19	93	83.206	Poecilia_formosa
ENSIPUG00000025084	srp19	94	83.459	ENSPLAG00000007784	srp19	93	83.206	Poecilia_latipinna
ENSIPUG00000025084	srp19	94	84.211	ENSPMEG00000003056	srp19	93	83.969	Poecilia_mexicana
ENSIPUG00000025084	srp19	94	83.459	ENSPREG00000017307	srp19	92	83.206	Poecilia_reticulata
ENSIPUG00000025084	srp19	90	69.531	ENSPPYG00000029584	SRP19	86	69.841	Pongo_abelii
ENSIPUG00000025084	srp19	67	71.605	ENSPCAG00000000228	SRP19	65	69.149	Procavia_capensis
ENSIPUG00000025084	srp19	92	67.857	ENSPCOG00000023239	SRP19	90	67.568	Propithecus_coquereli
ENSIPUG00000025084	srp19	89	69.291	ENSPVAG00000004895	SRP19	88	69.048	Pteropus_vampyrus
ENSIPUG00000025084	srp19	93	85.606	ENSPNAG00000009392	srp19	93	85.606	Pygocentrus_nattereri
ENSIPUG00000025084	srp19	90	70.312	ENSRNOG00000020204	Srp19	88	70.635	Rattus_norvegicus
ENSIPUG00000025084	srp19	52	62.667	ENSRBIG00000031651	-	83	62.667	Rhinopithecus_bieti
ENSIPUG00000025084	srp19	91	62.162	ENSRBIG00000040440	-	89	62.162	Rhinopithecus_bieti
ENSIPUG00000025084	srp19	92	68.750	ENSRBIG00000015627	-	90	68.468	Rhinopithecus_bieti
ENSIPUG00000025084	srp19	91	62.162	ENSRROG00000037054	-	90	62.162	Rhinopithecus_roxellana
ENSIPUG00000025084	srp19	87	54.839	ENSRROG00000037316	-	90	55.372	Rhinopithecus_roxellana
ENSIPUG00000025084	srp19	91	52.713	ENSSBOG00000032685	-	84	59.574	Saimiri_boliviensis_boliviensis
ENSIPUG00000025084	srp19	92	68.750	ENSSBOG00000028071	-	90	68.468	Saimiri_boliviensis_boliviensis
ENSIPUG00000025084	srp19	94	78.947	ENSSFOG00015022139	srp19	93	78.626	Scleropages_formosus
ENSIPUG00000025084	srp19	94	78.195	ENSSMAG00000016803	srp19	92	77.863	Scophthalmus_maximus
ENSIPUG00000025084	srp19	94	72.917	ENSSDUG00000012930	srp19	93	72.535	Seriola_dumerili
ENSIPUG00000025084	srp19	70	61.616	ENSSLDG00000021916	-	51	85.484	Seriola_lalandi_dorsalis
ENSIPUG00000025084	srp19	89	70.079	ENSSARG00000000615	SRP19	88	69.841	Sorex_araneus
ENSIPUG00000025084	srp19	87	69.919	ENSSPUG00000015769	SRP19	90	67.939	Sphenodon_punctatus
ENSIPUG00000025084	srp19	89	69.291	ENSSSCG00000026230	SRP19	88	69.048	Sus_scrofa
ENSIPUG00000025084	srp19	87	66.667	ENSTGUG00000001019	SRP19	86	66.667	Taeniopygia_guttata
ENSIPUG00000025084	srp19	94	78.102	ENSTRUG00000023119	srp19	93	77.778	Takifugu_rubripes
ENSIPUG00000025084	srp19	94	79.699	ENSTNIG00000018880	srp19	93	79.389	Tetraodon_nigroviridis
ENSIPUG00000025084	srp19	89	68.504	ENSTTRG00000001690	SRP19	87	68.254	Tursiops_truncatus
ENSIPUG00000025084	srp19	87	70.161	ENSUAMG00000000111	SRP19	88	70.635	Ursus_americanus
ENSIPUG00000025084	srp19	89	70.866	ENSUMAG00000016997	SRP19	88	70.635	Ursus_maritimus
ENSIPUG00000025084	srp19	89	70.079	ENSVPAG00000006001	SRP19	88	69.841	Vicugna_pacos
ENSIPUG00000025084	srp19	66	71.250	ENSVVUG00000012423	SRP19	86	74.627	Vulpes_vulpes
ENSIPUG00000025084	srp19	86	67.213	ENSXETG00000011993	srp19	85	66.667	Xenopus_tropicalis
ENSIPUG00000025084	srp19	87	69.919	ENSXCOG00000012530	srp19	86	69.919	Xiphophorus_couchianus
ENSIPUG00000025084	srp19	94	84.211	ENSXMAG00000029788	srp19	93	83.969	Xiphophorus_maculatus