EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000025100 (Gene tree)
Gene ID
108271245
Gene Symbol
rab11b
Alias
-
Full Name
RAB11B%2C member RAS oncogene family
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
9216 bases
Position
chr10:16416185-16425400
Accession
108271245
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000037521MMR_HSR1PF01926.233.6e-0711
ENSIPUP00000037523MMR_HSR1PF01926.235.8e-0711
ENSIPUP00000037525MMR_HSR1PF01926.236.5e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000038988-3075-ENSIPUP00000037523224 (aa)--
ENSIPUT00000038986-3024XM_017478680ENSIPUP00000037521218 (aa)XP_017334169A0A2D0RUJ7
ENSIPUT00000038990-2910-ENSIPUP00000037525230 (aa)--
Gene Model
Click here to download ENSIPUG00000025100's gene model file
Pathways
Pathway IDPathway NameSource
ipu04144EndocytosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000025100's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000025100rab11b7833.880ENSIPUG00000017447rab34a7033.880
ENSIPUG00000025100rab11b9766.038ENSIPUG00000012218RAB259766.038
ENSIPUG00000025100rab11b8932.000ENSIPUG00000015058rab6b9232.000
ENSIPUG00000025100rab11b6136.296ENSIPUG00000000432RAB205735.862
ENSIPUG00000025100rab11b7736.905ENSIPUG00000006702rras8236.905
ENSIPUG00000025100rab11b9440.777ENSIPUG00000023392rab5a9040.777
ENSIPUG00000025100rab11b7240.491ENSIPUG00000007246rab7a8040.244
ENSIPUG00000025100rab11b6136.296ENSIPUG00000018288RAB205735.862
ENSIPUG00000025100rab11b7845.029ENSIPUG00000010859rab18b9938.806
ENSIPUG00000025100rab11b7533.333ENSIPUG00000005254RERG8533.333
ENSIPUG00000025100rab11b7443.827ENSIPUG00000019237rab157643.827
ENSIPUG00000025100rab11b9537.799ENSIPUG00000011376rab42a9837.799
ENSIPUG00000025100rab11b10098.165ENSIPUG00000019927rab11bb10098.165
ENSIPUG00000025100rab11b7039.103ENSIPUG00000022673rab366039.103
ENSIPUG00000025100rab11b8636.453ENSIPUG00000014269rab33a8536.453
ENSIPUG00000025100rab11b7854.971ENSIPUG00000007539rab2a8154.971
ENSIPUG00000025100rab11b7237.580ENSIPUG00000019382rab418035.948
ENSIPUG00000025100rab11b7946.552ENSIPUG00000020833rab39b8246.552
ENSIPUG00000025100rab11b7947.126ENSIPUG00000024203rab39ba8247.126
ENSIPUG00000025100rab11b9340.865ENSIPUG00000024622rab359840.865
ENSIPUG00000025100rab11b7440.854ENSIPUG00000016561rab9b7441.212
ENSIPUG00000025100rab11b9981.106ENSIPUG00000006091RAB11A9981.106
ENSIPUG00000025100rab11b8052.299ENSIPUG00000015525-8152.299
ENSIPUG00000025100rab11b7236.306ENSIPUG00000018098rab6b7536.306
ENSIPUG00000025100rab11b9042.640ENSIPUG00000021010Rab309642.640
ENSIPUG00000025100rab11b7034.839ENSIPUG00000004259kras8735.928
ENSIPUG00000025100rab11b6636.806ENSIPUG00000016494rab237936.196
ENSIPUG00000025100rab11b9437.619ENSIPUG00000014035rab9a9937.037
ENSIPUG00000025100rab11b8340.107ENSIPUG00000016261RAB198440.107
ENSIPUG00000025100rab11b7441.615ENSIPUG00000010794rab22a8241.615
ENSIPUG00000025100rab11b7543.636ENSIPUG00000017401rab128338.679
ENSIPUG00000025100rab11b7432.317ENSIPUG00000000962MRAS8234.091
ENSIPUG00000025100rab11b7434.132ENSIPUG00000009784-8033.333
ENSIPUG00000025100rab11b10088.073ENSIPUG00000021401Rab11a10088.073
ENSIPUG00000025100rab11b7348.428ENSIPUG00000003199rab137948.428
ENSIPUG00000025100rab11b7241.104ENSIPUG00000022445RAB7A7940.854
ENSIPUG00000025100rab11b5630.159ENSIPUG00000002122arl4cb6430.469
ENSIPUG00000025100rab11b7644.578ENSIPUG00000020226RAB158144.578
ENSIPUG00000025100rab11b7431.707ENSIPUG00000013954rasm8233.523
ENSIPUG00000025100rab11b9646.890ENSIPUG00000008650rab1a9946.890
ENSIPUG00000025100rab11b9646.411ENSIPUG00000020508rab1ab9946.411
ENSIPUG00000025100rab11b7838.728ENSIPUG00000022394zgc:1015597638.333
ENSIPUG00000025100rab11b5331.034ENSIPUG00000020426arl116331.034
ENSIPUG00000025100rab11b7432.948ENSIPUG00000000761zgc6832.948
ENSIPUG00000025100rab11b7444.099ENSIPUG00000018050RAB318344.099
ENSIPUG00000025100rab11b7239.264ENSIPUG00000017200-7939.024
ENSIPUG00000025100rab11b6835.333ENSIPUG00000006053hras8536.420
ENSIPUG00000025100rab11b7648.795ENSIPUG00000011489Rab359145.109
ENSIPUG00000025100rab11b7547.853ENSIPUG00000020082rab5c7747.853
ENSIPUG00000025100rab11b8833.679ENSIPUG00000021740rab6a8833.679
ENSIPUG00000025100rab11b6835.333ENSIPUG00000022502hrasb8536.420
ENSIPUG00000025100rab11b7654.217ENSIPUG00000017890Rab1A8354.217
ENSIPUG00000025100rab11b8051.724ENSIPUG00000007415rab148151.724
ENSIPUG00000025100rab11b10063.801ENSIPUG00000006126Rab2510063.801
ENSIPUG00000025100rab11b7840.000ENSIPUG00000017684rab33b7640.000
ENSIPUG00000025100rab11b9736.239ENSIPUG00000012509-9736.239
ENSIPUG00000025100rab11b7332.704ENSIPUG00000024568rheb8632.704
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000025100rab11b10097.248ENSAPOG00000023455rab11bb10097.248Acanthochromis_polyacanthus
ENSIPUG00000025100rab11b10096.789ENSACIG00000024376-10096.789Amphilophus_citrinellus
ENSIPUG00000025100rab11b10084.404ENSACIG00000019631rab11bb10084.404Amphilophus_citrinellus
ENSIPUG00000025100rab11b10097.248ENSAOCG00000018239rab11bb10097.248Amphiprion_ocellaris
ENSIPUG00000025100rab11b10096.789ENSAOCG00000018849-10096.789Amphiprion_ocellaris
ENSIPUG00000025100rab11b10097.248ENSAPEG00000016590rab11bb10097.248Amphiprion_percula
ENSIPUG00000025100rab11b10096.330ENSATEG00000023725-10096.330Anabas_testudineus
ENSIPUG00000025100rab11b10097.248ENSATEG00000017696rab11bb10097.248Anabas_testudineus
ENSIPUG00000025100rab11b9697.129ENSAPLG00000011046-9697.129Anas_platyrhynchos
ENSIPUG00000025100rab11b10097.248ENSACLG00000007076rab11bb10097.248Astatotilapia_calliptera
ENSIPUG00000025100rab11b10096.789ENSACLG00000005446-10096.789Astatotilapia_calliptera
ENSIPUG00000025100rab11b10097.706ENSAMXG00000042655rab11bb10097.706Astyanax_mexicanus
ENSIPUG00000025100rab11b10099.541ENSAMXG00000037623-10099.541Astyanax_mexicanus
ENSIPUG00000025100rab11b10097.248ENSBTAG00000002475RAB11B10097.248Bos_taurus
ENSIPUG00000025100rab11b9695.215ENSCHIG00000022426-9494.762Capra_hircus
ENSIPUG00000025100rab11b10097.248ENSCATG00000029188-10097.248Cercocebus_atys
ENSIPUG00000025100rab11b10098.165ENSCPBG00000017056-10098.165Chrysemys_picta_bellii
ENSIPUG00000025100rab11b10097.248ENSCSEG00000012149rab11bb10097.248Cynoglossus_semilaevis
ENSIPUG00000025100rab11b10096.330ENSCSEG00000007239-10096.330Cynoglossus_semilaevis
ENSIPUG00000025100rab11b10095.872ENSCVAG00000019718-10095.872Cyprinodon_variegatus
ENSIPUG00000025100rab11b10097.248ENSCVAG00000017021-10097.248Cyprinodon_variegatus
ENSIPUG00000025100rab11b10094.495ENSCVAG00000019751-10094.495Cyprinodon_variegatus
ENSIPUG00000025100rab11b10096.330ENSDARG00000090086rab11bb10096.330Danio_rerio
ENSIPUG00000025100rab11b9995.853ENSETEG00000000905-9995.853Echinops_telfairi
ENSIPUG00000025100rab11b9994.419ENSEASG00005003708-9994.419Equus_asinus_asinus
ENSIPUG00000025100rab11b9994.419ENSECAG00000000716RAB11B9994.419Equus_caballus
ENSIPUG00000025100rab11b10095.413ENSELUG00000020948-9898.438Esox_lucius
ENSIPUG00000025100rab11b10096.330ENSELUG00000021148rab11bb10096.330Esox_lucius
ENSIPUG00000025100rab11b10095.413ENSELUG00000000916-10095.413Esox_lucius
ENSIPUG00000025100rab11b10098.165ENSFALG00000011828-10098.165Ficedula_albicollis
ENSIPUG00000025100rab11b10096.330ENSFHEG00000022676-10096.330Fundulus_heteroclitus
ENSIPUG00000025100rab11b10097.248ENSFHEG00000018353rab11bb10097.248Fundulus_heteroclitus
ENSIPUG00000025100rab11b9992.593ENSGMOG00000009668-9992.593Gadus_morhua
ENSIPUG00000025100rab11b10096.789ENSGMOG00000009211rab11bb10096.789Gadus_morhua
ENSIPUG00000025100rab11b10098.165ENSGALG00000000613RAB11B10098.165Gallus_gallus
ENSIPUG00000025100rab11b10097.248ENSGAFG00000007102rab11bb10097.248Gambusia_affinis
ENSIPUG00000025100rab11b10096.789ENSGACG00000015479rab11bb10096.789Gasterosteus_aculeatus
ENSIPUG00000025100rab11b10094.495ENSGACG00000013297-9994.495Gasterosteus_aculeatus
ENSIPUG00000025100rab11b10097.248ENSGGOG00000014516RAB11B10097.248Gorilla_gorilla
ENSIPUG00000025100rab11b10096.789ENSHBUG00000009947-10096.789Haplochromis_burtoni
ENSIPUG00000025100rab11b10097.248ENSHBUG00000014777rab11bb10097.248Haplochromis_burtoni
ENSIPUG00000025100rab11b10097.706ENSHCOG00000002423rab11bb10097.706Hippocampus_comes
ENSIPUG00000025100rab11b10092.661ENSHCOG00000000985-10092.661Hippocampus_comes
ENSIPUG00000025100rab11b10094.954ENSHCOG00000000954-10094.954Hippocampus_comes
ENSIPUG00000025100rab11b10097.248ENSKMAG00000009033rab11bb10097.248Kryptolebias_marmoratus
ENSIPUG00000025100rab11b10096.789ENSKMAG00000006170-10096.789Kryptolebias_marmoratus
ENSIPUG00000025100rab11b10088.532ENSLBEG00000005981-10088.532Labrus_bergylta
ENSIPUG00000025100rab11b10096.789ENSLBEG00000015248rab11bb10096.789Labrus_bergylta
ENSIPUG00000025100rab11b10095.872ENSLBEG00000004172-10095.872Labrus_bergylta
ENSIPUG00000025100rab11b10098.165ENSLACG00000016857-10098.165Latimeria_chalumnae
ENSIPUG00000025100rab11b10097.248ENSMFAG00000003654RAB11B10097.248Macaca_fascicularis
ENSIPUG00000025100rab11b10097.248ENSMLEG00000030601-10097.248Mandrillus_leucophaeus
ENSIPUG00000025100rab11b10096.789ENSMAMG00000006378rab11bb10096.789Mastacembelus_armatus
ENSIPUG00000025100rab11b10095.872ENSMAMG00000018533-10095.872Mastacembelus_armatus
ENSIPUG00000025100rab11b10097.248ENSMZEG00005003352rab11bb10097.248Maylandia_zebra
ENSIPUG00000025100rab11b10096.789ENSMZEG00005010975-10096.789Maylandia_zebra
ENSIPUG00000025100rab11b10097.248ENSMICG00000034065-10097.248Microcebus_murinus
ENSIPUG00000025100rab11b9995.853ENSMMOG00000001238-9995.853Mola_mola
ENSIPUG00000025100rab11b10096.789ENSMMOG00000001250-10096.789Mola_mola
ENSIPUG00000025100rab11b9498.049ENSMMOG00000007917rab11bb10098.049Mola_mola
ENSIPUG00000025100rab11b10098.165ENSMODG00000003841-10098.165Monodelphis_domestica
ENSIPUG00000025100rab11b10097.248ENSMALG00000022187rab11bb10097.248Monopterus_albus
ENSIPUG00000025100rab11b9487.923ENSMLUG00000006677-10087.923Myotis_lucifugus
ENSIPUG00000025100rab11b10096.789ENSNBRG00000023885-10096.789Neolamprologus_brichardi
ENSIPUG00000025100rab11b10097.248ENSNBRG00000000372rab11bb10097.248Neolamprologus_brichardi
ENSIPUG00000025100rab11b10098.165ENSMEUG00000003686-10098.165Notamacropus_eugenii
ENSIPUG00000025100rab11b10096.789ENSONIG00000002544-10096.789Oreochromis_niloticus
ENSIPUG00000025100rab11b10097.248ENSONIG00000010435rab11bb10097.248Oreochromis_niloticus
ENSIPUG00000025100rab11b5098.165ENSOANG00000031567-8690.833Ornithorhynchus_anatinus
ENSIPUG00000025100rab11b10096.789ENSORLG00000013938rab11bb10096.789Oryzias_latipes
ENSIPUG00000025100rab11b9995.392ENSORLG00000015284-7295.392Oryzias_latipes
ENSIPUG00000025100rab11b9995.392ENSORLG00020020844RAB11B9995.392Oryzias_latipes_hni
ENSIPUG00000025100rab11b10096.789ENSORLG00020019393rab11bb10096.789Oryzias_latipes_hni
ENSIPUG00000025100rab11b10096.789ENSORLG00015020173rab11bb10096.789Oryzias_latipes_hsok
ENSIPUG00000025100rab11b9995.392ENSORLG00015016999RAB11B9995.392Oryzias_latipes_hsok
ENSIPUG00000025100rab11b10097.248ENSOMEG00000017806-10097.248Oryzias_melastigma
ENSIPUG00000025100rab11b10095.872ENSOMEG00000002562-10095.872Oryzias_melastigma
ENSIPUG00000025100rab11b10097.248ENSPPAG00000028589-10097.248Pan_paniscus
ENSIPUG00000025100rab11b10097.248ENSPTRG00000010422RAB11B10097.248Pan_troglodytes
ENSIPUG00000025100rab11b10097.248ENSPANG00000007765-10097.248Papio_anubis
ENSIPUG00000025100rab11b10097.248ENSPKIG00000011640rab11bb10097.248Paramormyrops_kingsleyae
ENSIPUG00000025100rab11b9897.196ENSPKIG00000001389-6997.196Paramormyrops_kingsleyae
ENSIPUG00000025100rab11b10098.624ENSPKIG00000011703-10098.624Paramormyrops_kingsleyae
ENSIPUG00000025100rab11b9892.694ENSPSIG00000010242-8592.694Pelodiscus_sinensis
ENSIPUG00000025100rab11b10095.872ENSPMGG00000014333-10095.872Periophthalmus_magnuspinnatus
ENSIPUG00000025100rab11b9992.627ENSPMGG00000014336-9992.627Periophthalmus_magnuspinnatus
ENSIPUG00000025100rab11b10097.248ENSPMGG00000009435rab11bb10097.248Periophthalmus_magnuspinnatus
ENSIPUG00000025100rab11b9795.755ENSPCIG00000020371-9995.755Phascolarctos_cinereus
ENSIPUG00000025100rab11b10096.789ENSPFOG00000006224-10096.789Poecilia_formosa
ENSIPUG00000025100rab11b10097.248ENSPFOG00000024114-10097.248Poecilia_formosa
ENSIPUG00000025100rab11b10097.248ENSPLAG00000001598rab11bb10097.248Poecilia_latipinna
ENSIPUG00000025100rab11b10096.789ENSPLAG00000014207-10096.789Poecilia_latipinna
ENSIPUG00000025100rab11b10096.789ENSPMEG00000007842-10096.789Poecilia_mexicana
ENSIPUG00000025100rab11b10097.248ENSPMEG00000012389rab11bb10097.248Poecilia_mexicana
ENSIPUG00000025100rab11b10097.248ENSPREG00000014269rab11bb10097.248Poecilia_reticulata
ENSIPUG00000025100rab11b10096.330ENSPREG00000006336-10096.330Poecilia_reticulata
ENSIPUG00000025100rab11b10097.248ENSPNYG00000004098rab11bb10097.248Pundamilia_nyererei
ENSIPUG00000025100rab11b10096.789ENSPNYG00000019611-10096.789Pundamilia_nyererei
ENSIPUG00000025100rab11b10097.248ENSRROG00000037812-10097.248Rhinopithecus_roxellana
ENSIPUG00000025100rab11b9796.226ENSSHAG00000006816-9796.226Sarcophilus_harrisii
ENSIPUG00000025100rab11b10073.394ENSSFOG00015006245-10073.394Scleropages_formosus
ENSIPUG00000025100rab11b10097.706ENSSFOG00015009042rab11bb10097.706Scleropages_formosus
ENSIPUG00000025100rab11b10093.119ENSSMAG00000018613-10093.119Scophthalmus_maximus
ENSIPUG00000025100rab11b10096.789ENSSMAG00000004922rab11bb10096.789Scophthalmus_maximus
ENSIPUG00000025100rab11b10096.789ENSSDUG00000002934-10096.789Seriola_dumerili
ENSIPUG00000025100rab11b10097.248ENSSDUG00000013558rab11bb10097.248Seriola_dumerili
ENSIPUG00000025100rab11b10097.248ENSSLDG00000020676rab11bb10097.248Seriola_lalandi_dorsalis
ENSIPUG00000025100rab11b10096.789ENSSLDG00000005275-10096.789Seriola_lalandi_dorsalis
ENSIPUG00000025100rab11b10097.706ENSSPUG00000002243-10097.706Sphenodon_punctatus
ENSIPUG00000025100rab11b10096.789ENSSPAG00000014559-10096.789Stegastes_partitus
ENSIPUG00000025100rab11b10097.248ENSSPAG00000011419rab11bb10097.248Stegastes_partitus
ENSIPUG00000025100rab11b10098.165ENSTGUG00000000084-10098.165Taeniopygia_guttata
ENSIPUG00000025100rab11b10097.248ENSTRUG00000022029rab11bb10097.248Takifugu_rubripes
ENSIPUG00000025100rab11b9994.931ENSTRUG00000021614-9994.931Takifugu_rubripes
ENSIPUG00000025100rab11b9996.759ENSTRUG00000021619-10096.759Takifugu_rubripes
ENSIPUG00000025100rab11b9395.567ENSTNIG00000002003-10095.567Tetraodon_nigroviridis
ENSIPUG00000025100rab11b10095.872ENSTNIG00000011081rab11bb10095.872Tetraodon_nigroviridis
ENSIPUG00000025100rab11b9996.759ENSTNIG00000013182-10096.759Tetraodon_nigroviridis
ENSIPUG00000025100rab11b9994.470ENSTNIG00000013184-9994.470Tetraodon_nigroviridis
ENSIPUG00000025100rab11b9497.073ENSUAMG00000006639-10096.602Ursus_americanus
ENSIPUG00000025100rab11b10097.717ENSXETG00000025484rab11b.19997.717Xenopus_tropicalis
ENSIPUG00000025100rab11b10097.248ENSXCOG00000008042-10097.248Xiphophorus_couchianus
ENSIPUG00000025100rab11b10096.789ENSXCOG00000009190-10096.789Xiphophorus_couchianus
ENSIPUG00000025100rab11b10097.248ENSXMAG00000011926rab11bb10097.248Xiphophorus_maculatus
ENSIPUG00000025100rab11b10096.330ENSXMAG00000024840-10096.330Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us