EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000000235 (Gene tree)
Gene ID: 101600121
Gene Symbol: -
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 25956 bases
Position: chrJH725621.1:958212-984167
Accession: 101600121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000000281	ResIII	PF04851.15	1.4e-08	1	1
ENSJJAP00000000281	DEAD	PF00270.29	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000000310	-	2016	XM_012952137	ENSJJAP00000000281	671 (aa)	XP_012807591	-

Gene Model

Click here to download ENSJJAG00000000235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000000235's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000000235	-	80	37.049	ENSJJAG00000010314	Rad54b	69	36.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000000235	-	99	80.537	ENSG00000085999	RAD54L	100	98.667	Homo_sapiens
ENSJJAG00000000235	-	99	67.778	ENSAPOG00000011643	rad54l	99	67.917	Acanthochromis_polyacanthus
ENSJJAG00000000235	-	99	80.537	ENSAMEG00000013902	RAD54L	99	80.537	Ailuropoda_melanoleuca
ENSJJAG00000000235	-	99	64.477	ENSACIG00000001939	rad54l	99	64.611	Amphilophus_citrinellus
ENSJJAG00000000235	-	99	67.116	ENSAOCG00000017576	rad54l	99	67.251	Amphiprion_ocellaris
ENSJJAG00000000235	-	94	67.792	ENSAPEG00000020658	rad54l	98	67.932	Amphiprion_percula
ENSJJAG00000000235	-	93	68.511	ENSATEG00000006767	rad54l	100	68.511	Anabas_testudineus
ENSJJAG00000000235	-	93	71.795	ENSAPLG00000006389	RAD54L	99	71.937	Anas_platyrhynchos
ENSJJAG00000000235	-	99	67.962	ENSACAG00000002312	RAD54L	99	68.097	Anolis_carolinensis
ENSJJAG00000000235	-	99	80.134	ENSANAG00000035439	RAD54L	99	80.268	Aotus_nancymaae
ENSJJAG00000000235	-	99	63.539	ENSACLG00000018711	rad54l	99	63.673	Astatotilapia_calliptera
ENSJJAG00000000235	-	99	67.248	ENSAMXG00000012777	rad54l	99	67.383	Astyanax_mexicanus
ENSJJAG00000000235	-	99	80.429	ENSBTAG00000019901	RAD54L	99	80.563	Bos_taurus
ENSJJAG00000000235	-	87	49.541	WBGene00004298	rad-54	79	49.541	Caenorhabditis_elegans
ENSJJAG00000000235	-	99	83.502	ENSCJAG00000021080	RAD54L	94	83.647	Callithrix_jacchus
ENSJJAG00000000235	-	99	80.537	ENSCAFG00000004272	RAD54L	99	80.537	Canis_familiaris
ENSJJAG00000000235	-	99	80.537	ENSCAFG00020015066	RAD54L	99	80.537	Canis_lupus_dingo
ENSJJAG00000000235	-	99	80.295	ENSCHIG00000020118	RAD54L	99	80.429	Capra_hircus
ENSJJAG00000000235	-	99	80.295	ENSTSYG00000002032	RAD54L	99	80.429	Carlito_syrichta
ENSJJAG00000000235	-	99	80.671	ENSCPOG00000006768	RAD54L	99	80.805	Cavia_porcellus
ENSJJAG00000000235	-	99	80.805	ENSCCAG00000025783	RAD54L	99	80.940	Cebus_capucinus
ENSJJAG00000000235	-	99	80.268	ENSCATG00000030589	RAD54L	99	80.403	Cercocebus_atys
ENSJJAG00000000235	-	99	81.477	ENSCLAG00000004645	RAD54L	99	81.611	Chinchilla_lanigera
ENSJJAG00000000235	-	99	80.403	ENSCSAG00000001229	RAD54L	99	80.537	Chlorocebus_sabaeus
ENSJJAG00000000235	-	99	70.107	ENSCPBG00000005675	RAD54L	99	70.375	Chrysemys_picta_bellii
ENSJJAG00000000235	-	99	52.191	ENSCING00000024456	-	99	52.191	Ciona_intestinalis
ENSJJAG00000000235	-	99	52.418	ENSCSAVG00000010859	-	99	52.418	Ciona_savignyi
ENSJJAG00000000235	-	99	80.268	ENSCANG00000034891	RAD54L	99	80.403	Colobus_angolensis_palliatus
ENSJJAG00000000235	-	99	81.611	ENSCGRG00001014807	Rad54l	99	81.745	Cricetulus_griseus_chok1gshd
ENSJJAG00000000235	-	99	81.611	ENSCGRG00000016038	Rad54l	99	81.745	Cricetulus_griseus_crigri
ENSJJAG00000000235	-	99	65.587	ENSCSEG00000001983	rad54l	99	65.722	Cynoglossus_semilaevis
ENSJJAG00000000235	-	88	56.414	ENSCVAG00000019561	rad54l	96	56.414	Cyprinodon_variegatus
ENSJJAG00000000235	-	99	66.220	ENSDARG00000018623	rad54l	99	66.354	Danio_rerio
ENSJJAG00000000235	-	99	76.779	ENSDNOG00000003395	RAD54L	99	76.913	Dasypus_novemcinctus
ENSJJAG00000000235	-	99	73.514	ENSDORG00000002632	Rad54l	99	73.649	Dipodomys_ordii
ENSJJAG00000000235	-	99	46.277	FBgn0002989	okr	95	46.277	Drosophila_melanogaster
ENSJJAG00000000235	-	81	92.683	ENSETEG00000000550	RAD54L	77	92.683	Echinops_telfairi
ENSJJAG00000000235	-	99	80.268	ENSEASG00005004511	RAD54L	99	80.403	Equus_asinus_asinus
ENSJJAG00000000235	-	99	87.083	ENSECAG00000008760	RAD54L	99	87.228	Equus_caballus
ENSJJAG00000000235	-	99	74.765	ENSEEUG00000008113	RAD54L	99	74.899	Erinaceus_europaeus
ENSJJAG00000000235	-	99	67.290	ENSELUG00000002295	rad54l	99	67.423	Esox_lucius
ENSJJAG00000000235	-	99	79.866	ENSFCAG00000003444	RAD54L	99	79.866	Felis_catus
ENSJJAG00000000235	-	99	70.683	ENSFALG00000009480	RAD54L	99	70.817	Ficedula_albicollis
ENSJJAG00000000235	-	99	81.342	ENSFDAG00000007806	RAD54L	99	81.477	Fukomys_damarensis
ENSJJAG00000000235	-	64	70.000	ENSFHEG00000009824	rad54l	78	69.231	Fundulus_heteroclitus
ENSJJAG00000000235	-	99	66.086	ENSGMOG00000014568	rad54l	100	66.086	Gadus_morhua
ENSJJAG00000000235	-	99	71.275	ENSGALG00000010356	RAD54L	92	71.275	Gallus_gallus
ENSJJAG00000000235	-	89	64.845	ENSGAFG00000011110	rad54l	99	64.845	Gambusia_affinis
ENSJJAG00000000235	-	99	66.533	ENSGACG00000003111	rad54l	97	66.533	Gasterosteus_aculeatus
ENSJJAG00000000235	-	99	69.973	ENSGAGG00000014089	RAD54L	96	70.107	Gopherus_agassizii
ENSJJAG00000000235	-	99	80.537	ENSGGOG00000010602	RAD54L	99	80.671	Gorilla_gorilla
ENSJJAG00000000235	-	99	63.807	ENSHBUG00000007793	rad54l	99	63.941	Haplochromis_burtoni
ENSJJAG00000000235	-	99	81.074	ENSHGLG00000000753	RAD54L	99	81.208	Heterocephalus_glaber_female
ENSJJAG00000000235	-	99	80.940	ENSHGLG00100016987	RAD54L	99	81.074	Heterocephalus_glaber_male
ENSJJAG00000000235	-	99	65.067	ENSIPUG00000015999	rad54l	100	67.571	Ictalurus_punctatus
ENSJJAG00000000235	-	99	82.013	ENSSTOG00000029125	RAD54L	99	82.013	Ictidomys_tridecemlineatus
ENSJJAG00000000235	-	99	65.410	ENSKMAG00000009944	rad54l	99	65.545	Kryptolebias_marmoratus
ENSJJAG00000000235	-	99	67.429	ENSLBEG00000014617	rad54l	99	67.564	Labrus_bergylta
ENSJJAG00000000235	-	99	68.901	ENSLOCG00000004144	rad54l	99	69.094	Lepisosteus_oculatus
ENSJJAG00000000235	-	99	78.926	ENSLAFG00000007583	RAD54L	99	79.060	Loxodonta_africana
ENSJJAG00000000235	-	99	80.268	ENSMFAG00000031241	RAD54L	99	80.403	Macaca_fascicularis
ENSJJAG00000000235	-	99	80.268	ENSMMUG00000011568	RAD54L	99	80.403	Macaca_mulatta
ENSJJAG00000000235	-	99	80.268	ENSMNEG00000038562	RAD54L	99	80.403	Macaca_nemestrina
ENSJJAG00000000235	-	99	80.403	ENSMLEG00000038145	RAD54L	99	80.537	Mandrillus_leucophaeus
ENSJJAG00000000235	-	99	66.488	ENSMAMG00000022180	rad54l	97	70.410	Mastacembelus_armatus
ENSJJAG00000000235	-	99	63.405	ENSMZEG00005018081	rad54l	99	63.539	Maylandia_zebra
ENSJJAG00000000235	-	99	71.409	ENSMGAG00000010634	RAD54L	99	71.409	Meleagris_gallopavo
ENSJJAG00000000235	-	99	81.745	ENSMAUG00000020076	Rad54l	99	81.879	Mesocricetus_auratus
ENSJJAG00000000235	-	99	81.342	ENSMICG00000003266	RAD54L	99	81.477	Microcebus_murinus
ENSJJAG00000000235	-	99	82.148	ENSMOCG00000001778	Rad54l	99	82.282	Microtus_ochrogaster
ENSJJAG00000000235	-	99	63.320	ENSMALG00000021148	rad54l	99	63.454	Monopterus_albus
ENSJJAG00000000235	-	99	80.446	MGP_CAROLIEiJ_G0026325	Rad54l	99	80.577	Mus_caroli
ENSJJAG00000000235	-	99	82.282	ENSMUSG00000028702	Rad54l	99	82.416	Mus_musculus
ENSJJAG00000000235	-	99	82.148	MGP_PahariEiJ_G0028657	Rad54l	99	82.282	Mus_pahari
ENSJJAG00000000235	-	99	82.148	MGP_SPRETEiJ_G0027297	Rad54l	99	82.282	Mus_spretus
ENSJJAG00000000235	-	99	80.027	ENSMPUG00000012883	RAD54L	99	80.027	Mustela_putorius_furo
ENSJJAG00000000235	-	99	81.074	ENSMLUG00000003763	RAD54L	99	81.208	Myotis_lucifugus
ENSJJAG00000000235	-	99	80.940	ENSNGAG00000024213	Rad54l	99	81.074	Nannospalax_galili
ENSJJAG00000000235	-	99	80.134	ENSNLEG00000016548	RAD54L	99	80.268	Nomascus_leucogenys
ENSJJAG00000000235	-	88	70.455	ENSMEUG00000006793	RAD54L	97	70.606	Notamacropus_eugenii
ENSJJAG00000000235	-	89	84.536	ENSOPRG00000016016	RAD54L	90	84.536	Ochotona_princeps
ENSJJAG00000000235	-	99	81.879	ENSODEG00000008519	RAD54L	99	82.013	Octodon_degus
ENSJJAG00000000235	-	99	63.539	ENSONIG00000007659	rad54l	99	63.673	Oreochromis_niloticus
ENSJJAG00000000235	-	99	80.268	ENSOCUG00000005229	RAD54L	99	80.403	Oryctolagus_cuniculus
ENSJJAG00000000235	-	99	64.516	ENSORLG00000002958	rad54l	99	65.457	Oryzias_latipes
ENSJJAG00000000235	-	99	65.591	ENSORLG00020006554	rad54l	96	69.453	Oryzias_latipes_hni
ENSJJAG00000000235	-	99	65.188	ENSORLG00015002907	rad54l	99	65.591	Oryzias_latipes_hsok
ENSJJAG00000000235	-	99	65.188	ENSOMEG00000007770	rad54l	99	65.457	Oryzias_melastigma
ENSJJAG00000000235	-	99	80.054	ENSOARG00000002264	RAD54L	99	80.187	Ovis_aries
ENSJJAG00000000235	-	99	80.268	ENSPPAG00000031222	RAD54L	99	80.403	Pan_paniscus
ENSJJAG00000000235	-	99	79.866	ENSPPRG00000010317	RAD54L	99	79.866	Panthera_pardus
ENSJJAG00000000235	-	99	79.866	ENSPTIG00000012200	RAD54L	99	79.866	Panthera_tigris_altaica
ENSJJAG00000000235	-	99	80.134	ENSPTRG00000000689	RAD54L	99	80.537	Pan_troglodytes
ENSJJAG00000000235	-	99	80.403	ENSPANG00000016295	RAD54L	99	80.537	Papio_anubis
ENSJJAG00000000235	-	99	65.541	ENSPKIG00000016172	rad54l	99	65.811	Paramormyrops_kingsleyae
ENSJJAG00000000235	-	98	69.783	ENSPSIG00000003258	RAD54L	99	69.919	Pelodiscus_sinensis
ENSJJAG00000000235	-	99	63.087	ENSPMGG00000016335	rad54l	99	63.221	Periophthalmus_magnuspinnatus
ENSJJAG00000000235	-	99	82.369	ENSPEMG00000011422	Rad54l	99	82.503	Peromyscus_maniculatus_bairdii
ENSJJAG00000000235	-	99	59.304	ENSPMAG00000007719	rad54l	99	59.304	Petromyzon_marinus
ENSJJAG00000000235	-	99	73.056	ENSPCIG00000029032	RAD54L	99	73.190	Phascolarctos_cinereus
ENSJJAG00000000235	-	83	66.509	ENSPFOG00000013732	rad54l	100	66.509	Poecilia_formosa
ENSJJAG00000000235	-	77	67.513	ENSPLAG00000023416	rad54l	96	67.513	Poecilia_latipinna
ENSJJAG00000000235	-	89	65.140	ENSPMEG00000008299	rad54l	99	65.140	Poecilia_mexicana
ENSJJAG00000000235	-	99	64.477	ENSPREG00000019955	rad54l	99	64.477	Poecilia_reticulata
ENSJJAG00000000235	-	99	86.212	ENSPPYG00000001398	RAD54L	99	86.357	Pongo_abelii
ENSJJAG00000000235	-	77	74.752	ENSPCAG00000005323	RAD54L	80	74.752	Procavia_capensis
ENSJJAG00000000235	-	99	81.074	ENSPCOG00000015423	RAD54L	99	81.208	Propithecus_coquereli
ENSJJAG00000000235	-	99	62.416	ENSPNYG00000002942	rad54l	99	62.819	Pundamilia_nyererei
ENSJJAG00000000235	-	99	66.354	ENSPNAG00000012483	rad54l	99	66.488	Pygocentrus_nattereri
ENSJJAG00000000235	-	99	82.148	ENSRNOG00000013148	Rad54l	99	82.282	Rattus_norvegicus
ENSJJAG00000000235	-	99	80.268	ENSRBIG00000043495	RAD54L	99	80.403	Rhinopithecus_bieti
ENSJJAG00000000235	-	99	80.403	ENSRROG00000020844	RAD54L	99	80.537	Rhinopithecus_roxellana
ENSJJAG00000000235	-	79	39.198	YGL163C	RAD54	71	40.123	Saccharomyces_cerevisiae
ENSJJAG00000000235	-	99	80.805	ENSSBOG00000024672	RAD54L	99	80.940	Saimiri_boliviensis_boliviensis
ENSJJAG00000000235	-	99	73.467	ENSSHAG00000000110	RAD54L	99	73.600	Sarcophilus_harrisii
ENSJJAG00000000235	-	99	67.158	ENSSDUG00000019147	rad54l	99	67.292	Seriola_dumerili
ENSJJAG00000000235	-	99	67.024	ENSSLDG00000012330	rad54l	99	67.158	Seriola_lalandi_dorsalis
ENSJJAG00000000235	-	80	77.453	ENSSARG00000006689	RAD54L	90	77.625	Sorex_araneus
ENSJJAG00000000235	-	99	66.083	ENSSPAG00000011016	rad54l	99	66.218	Stegastes_partitus
ENSJJAG00000000235	-	99	80.134	ENSSSCG00000003905	RAD54L	99	80.268	Sus_scrofa
ENSJJAG00000000235	-	99	70.281	ENSTGUG00000008233	RAD54L	99	70.549	Taeniopygia_guttata
ENSJJAG00000000235	-	99	64.490	ENSTRUG00000008410	rad54l	99	64.490	Takifugu_rubripes
ENSJJAG00000000235	-	99	63.087	ENSTNIG00000004716	rad54l	99	63.087	Tetraodon_nigroviridis
ENSJJAG00000000235	-	99	71.204	ENSTTRG00000006315	RAD54L	99	71.335	Tursiops_truncatus
ENSJJAG00000000235	-	99	80.162	ENSUAMG00000011824	RAD54L	99	80.162	Ursus_americanus
ENSJJAG00000000235	-	99	79.082	ENSUMAG00000023603	RAD54L	99	79.082	Ursus_maritimus
ENSJJAG00000000235	-	99	80.537	ENSVVUG00000007201	RAD54L	99	80.537	Vulpes_vulpes
ENSJJAG00000000235	-	95	64.583	ENSXETG00000004369	rad54l	100	64.722	Xenopus_tropicalis
ENSJJAG00000000235	-	59	68.689	ENSXCOG00000016028	rad54l	81	71.816	Xiphophorus_couchianus