EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000000530 (Gene tree)
Gene ID: 101598908
Gene Symbol: Pum1
Alias: Pumm
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 144935 bases
Position: chrJH725513.1:1703456-1848390
Accession: 101598908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000000646	PUF	PF00806.19	1.5e-70	1	8
ENSJJAP00000000646	PUF	PF00806.19	1.5e-70	2	8
ENSJJAP00000000646	PUF	PF00806.19	1.5e-70	3	8
ENSJJAP00000000646	PUF	PF00806.19	1.5e-70	4	8
ENSJJAP00000000646	PUF	PF00806.19	1.5e-70	5	8
ENSJJAP00000000646	PUF	PF00806.19	1.5e-70	6	8
ENSJJAP00000000646	PUF	PF00806.19	1.5e-70	7	8
ENSJJAP00000000646	PUF	PF00806.19	1.5e-70	8	8
ENSJJAP00000000641	PUF	PF00806.19	1.3e-69	1	8
ENSJJAP00000000641	PUF	PF00806.19	1.3e-69	2	8
ENSJJAP00000000641	PUF	PF00806.19	1.3e-69	3	8
ENSJJAP00000000641	PUF	PF00806.19	1.3e-69	4	8
ENSJJAP00000000641	PUF	PF00806.19	1.3e-69	5	8
ENSJJAP00000000641	PUF	PF00806.19	1.3e-69	6	8
ENSJJAP00000000641	PUF	PF00806.19	1.3e-69	7	8
ENSJJAP00000000641	PUF	PF00806.19	1.3e-69	8	8
ENSJJAP00000000637	PUF	PF00806.19	2.9e-69	1	8
ENSJJAP00000000637	PUF	PF00806.19	2.9e-69	2	8
ENSJJAP00000000637	PUF	PF00806.19	2.9e-69	3	8
ENSJJAP00000000637	PUF	PF00806.19	2.9e-69	4	8
ENSJJAP00000000637	PUF	PF00806.19	2.9e-69	5	8
ENSJJAP00000000637	PUF	PF00806.19	2.9e-69	6	8
ENSJJAP00000000637	PUF	PF00806.19	2.9e-69	7	8
ENSJJAP00000000637	PUF	PF00806.19	2.9e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000000675	-	5084	XM_004665176	ENSJJAP00000000641	1092 (aa)	XP_004665233	UPI000333342D
ENSJJAT00000000671	-	5491	XM_004665170	ENSJJAP00000000637	1188 (aa)	XP_004665227	UPI0003334621
ENSJJAT00000000680	-	4640	XM_004665178	ENSJJAP00000000646	944 (aa)	XP_004665235	UPI000333276F

Gene Model

Click here to download ENSJJAG00000000530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000000530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000000530	Pum1	86	86.417	ENSJJAG00000020969	Pum2	100	87.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000000530	Pum1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSJJAG00000000530	Pum1	90	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSJJAG00000000530	Pum1	100	100.000	ENSAMEG00000017656	PUM1	97	98.824	Ailuropoda_melanoleuca
ENSJJAG00000000530	Pum1	100	81.436	ENSACIG00000021013	pum1	100	76.573	Amphilophus_citrinellus
ENSJJAG00000000530	Pum1	90	91.566	ENSAOCG00000003944	pum1	100	77.606	Amphiprion_ocellaris
ENSJJAG00000000530	Pum1	90	91.566	ENSAPEG00000014550	pum1	100	77.606	Amphiprion_percula
ENSJJAG00000000530	Pum1	90	91.566	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSJJAG00000000530	Pum1	100	97.388	ENSAPLG00000009351	PUM1	100	97.225	Anas_platyrhynchos
ENSJJAG00000000530	Pum1	100	95.286	ENSACAG00000000682	PUM1	98	95.202	Anolis_carolinensis
ENSJJAG00000000530	Pum1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSJJAG00000000530	Pum1	90	76.830	ENSACLG00000019354	pum1	100	79.001	Astatotilapia_calliptera
ENSJJAG00000000530	Pum1	100	84.491	ENSAMXG00000020607	pum1	96	79.181	Astyanax_mexicanus
ENSJJAG00000000530	Pum1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSJJAG00000000530	Pum1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSJJAG00000000530	Pum1	100	100.000	ENSCAFG00000011205	PUM1	100	96.720	Canis_familiaris
ENSJJAG00000000530	Pum1	92	96.724	ENSCAFG00020024616	PUM1	99	98.102	Canis_lupus_dingo
ENSJJAG00000000530	Pum1	100	100.000	ENSCHIG00000012952	PUM1	100	98.906	Capra_hircus
ENSJJAG00000000530	Pum1	100	99.306	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSJJAG00000000530	Pum1	100	99.306	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSJJAG00000000530	Pum1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSJJAG00000000530	Pum1	100	99.306	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSJJAG00000000530	Pum1	100	100.000	ENSCSAG00000001028	PUM1	100	98.167	Chlorocebus_sabaeus
ENSJJAG00000000530	Pum1	92	100.000	ENSCHOG00000010245	PUM1	93	95.827	Choloepus_hoffmanni
ENSJJAG00000000530	Pum1	100	97.161	ENSCPBG00000009288	PUM1	100	97.343	Chrysemys_picta_bellii
ENSJJAG00000000530	Pum1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSJJAG00000000530	Pum1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSJJAG00000000530	Pum1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSJJAG00000000530	Pum1	85	81.041	ENSCSEG00000015981	pum1	100	77.613	Cynoglossus_semilaevis
ENSJJAG00000000530	Pum1	100	80.693	ENSCVAG00000007043	pum1	100	75.620	Cyprinodon_variegatus
ENSJJAG00000000530	Pum1	100	84.864	ENSDARG00000099256	pum1	100	79.431	Danio_rerio
ENSJJAG00000000530	Pum1	100	100.000	ENSDNOG00000010939	PUM1	100	98.486	Dasypus_novemcinctus
ENSJJAG00000000530	Pum1	85	99.275	ENSDORG00000001875	Pum1	100	99.275	Dipodomys_ordii
ENSJJAG00000000530	Pum1	85	100.000	ENSETEG00000004355	PUM1	87	93.262	Echinops_telfairi
ENSJJAG00000000530	Pum1	100	100.000	ENSEASG00005010813	PUM1	100	98.737	Equus_asinus_asinus
ENSJJAG00000000530	Pum1	100	99.306	ENSECAG00000021369	PUM1	100	98.570	Equus_caballus
ENSJJAG00000000530	Pum1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSJJAG00000000530	Pum1	100	83.476	ENSELUG00000002409	pum1	100	83.911	Esox_lucius
ENSJJAG00000000530	Pum1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSJJAG00000000530	Pum1	100	95.921	ENSFALG00000001214	PUM1	97	94.724	Ficedula_albicollis
ENSJJAG00000000530	Pum1	100	99.306	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSJJAG00000000530	Pum1	70	88.593	ENSGMOG00000010491	pum1	100	74.752	Gadus_morhua
ENSJJAG00000000530	Pum1	100	97.264	ENSGALG00000042598	PUM1	100	97.255	Gallus_gallus
ENSJJAG00000000530	Pum1	100	80.817	ENSGAFG00000015617	pum1	100	89.880	Gambusia_affinis
ENSJJAG00000000530	Pum1	100	81.158	ENSGACG00000005717	pum1	100	76.359	Gasterosteus_aculeatus
ENSJJAG00000000530	Pum1	100	96.804	ENSGAGG00000001290	PUM1	99	97.976	Gopherus_agassizii
ENSJJAG00000000530	Pum1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSJJAG00000000530	Pum1	100	81.188	ENSHBUG00000018718	pum1	100	76.364	Haplochromis_burtoni
ENSJJAG00000000530	Pum1	100	98.738	ENSHGLG00000013819	Pum1	100	98.738	Heterocephalus_glaber_female
ENSJJAG00000000530	Pum1	100	98.738	ENSHGLG00100008621	Pum1	100	98.738	Heterocephalus_glaber_male
ENSJJAG00000000530	Pum1	100	82.759	ENSIPUG00000020421	pum1	100	78.055	Ictalurus_punctatus
ENSJJAG00000000530	Pum1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSJJAG00000000530	Pum1	100	80.569	ENSKMAG00000003481	pum1	100	75.950	Kryptolebias_marmoratus
ENSJJAG00000000530	Pum1	100	80.545	ENSLBEG00000002527	pum1	100	75.911	Labrus_bergylta
ENSJJAG00000000530	Pum1	100	88.352	ENSLACG00000017188	PUM1	99	86.428	Latimeria_chalumnae
ENSJJAG00000000530	Pum1	100	90.932	ENSLOCG00000005210	pum1	99	87.813	Lepisosteus_oculatus
ENSJJAG00000000530	Pum1	100	98.234	ENSLAFG00000003178	PUM1	100	98.234	Loxodonta_africana
ENSJJAG00000000530	Pum1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSJJAG00000000530	Pum1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSJJAG00000000530	Pum1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSJJAG00000000530	Pum1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSJJAG00000000530	Pum1	100	81.188	ENSMAMG00000011606	pum1	100	76.446	Mastacembelus_armatus
ENSJJAG00000000530	Pum1	100	81.188	ENSMZEG00005005834	pum1	100	76.364	Maylandia_zebra
ENSJJAG00000000530	Pum1	100	97.222	ENSMGAG00000000724	PUM1	100	96.981	Meleagris_gallopavo
ENSJJAG00000000530	Pum1	100	99.306	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSJJAG00000000530	Pum1	99	97.887	ENSMICG00000012213	-	99	96.714	Microcebus_murinus
ENSJJAG00000000530	Pum1	100	99.306	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSJJAG00000000530	Pum1	100	98.907	ENSMOCG00000015463	Pum1	100	98.907	Microtus_ochrogaster
ENSJJAG00000000530	Pum1	90	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSJJAG00000000530	Pum1	100	97.395	ENSMODG00000017067	PUM1	100	97.395	Monodelphis_domestica
ENSJJAG00000000530	Pum1	90	88.506	ENSMALG00000016399	pum1	73	91.525	Monopterus_albus
ENSJJAG00000000530	Pum1	100	98.653	MGP_CAROLIEiJ_G0026549	Pum1	100	98.653	Mus_caroli
ENSJJAG00000000530	Pum1	100	99.306	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSJJAG00000000530	Pum1	100	99.306	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSJJAG00000000530	Pum1	100	99.306	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSJJAG00000000530	Pum1	100	100.000	ENSMPUG00000015454	PUM1	100	98.653	Mustela_putorius_furo
ENSJJAG00000000530	Pum1	100	100.000	ENSMLUG00000006490	PUM1	100	98.486	Myotis_lucifugus
ENSJJAG00000000530	Pum1	100	99.158	ENSNGAG00000002378	Pum1	100	99.158	Nannospalax_galili
ENSJJAG00000000530	Pum1	100	78.452	ENSNBRG00000010689	pum1	100	83.457	Neolamprologus_brichardi
ENSJJAG00000000530	Pum1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSJJAG00000000530	Pum1	80	100.000	ENSMEUG00000000976	-	75	96.959	Notamacropus_eugenii
ENSJJAG00000000530	Pum1	84	99.609	ENSOPRG00000001776	PUM1	73	99.609	Ochotona_princeps
ENSJJAG00000000530	Pum1	100	98.906	ENSODEG00000003465	PUM1	100	98.906	Octodon_degus
ENSJJAG00000000530	Pum1	100	81.740	ENSONIG00000002290	pum1	100	76.694	Oreochromis_niloticus
ENSJJAG00000000530	Pum1	81	77.459	ENSOANG00000004902	-	100	77.459	Ornithorhynchus_anatinus
ENSJJAG00000000530	Pum1	100	100.000	ENSOCUG00000008641	PUM1	99	98.570	Oryctolagus_cuniculus
ENSJJAG00000000530	Pum1	100	81.931	ENSORLG00000011482	pum1	100	76.112	Oryzias_latipes
ENSJJAG00000000530	Pum1	100	82.054	ENSORLG00020019461	pum1	100	76.112	Oryzias_latipes_hni
ENSJJAG00000000530	Pum1	100	82.054	ENSORLG00015011375	pum1	100	76.194	Oryzias_latipes_hsok
ENSJJAG00000000530	Pum1	90	92.771	ENSOMEG00000009312	pum1	58	77.027	Oryzias_melastigma
ENSJJAG00000000530	Pum1	100	99.306	ENSOGAG00000011063	PUM1	100	96.054	Otolemur_garnettii
ENSJJAG00000000530	Pum1	100	100.000	ENSOARG00000001899	PUM1	100	98.551	Ovis_aries
ENSJJAG00000000530	Pum1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSJJAG00000000530	Pum1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSJJAG00000000530	Pum1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSJJAG00000000530	Pum1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSJJAG00000000530	Pum1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSJJAG00000000530	Pum1	94	93.204	ENSPKIG00000010578	pum1	100	77.970	Paramormyrops_kingsleyae
ENSJJAG00000000530	Pum1	100	97.391	ENSPSIG00000014118	PUM1	100	97.391	Pelodiscus_sinensis
ENSJJAG00000000530	Pum1	100	76.923	ENSPMGG00000005836	pum1	100	81.907	Periophthalmus_magnuspinnatus
ENSJJAG00000000530	Pum1	100	99.306	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSJJAG00000000530	Pum1	100	97.311	ENSPCIG00000014151	PUM1	100	97.343	Phascolarctos_cinereus
ENSJJAG00000000530	Pum1	93	83.498	ENSPFOG00000007289	pum1	99	82.263	Poecilia_formosa
ENSJJAG00000000530	Pum1	100	82.593	ENSPLAG00000007256	pum1	100	78.031	Poecilia_latipinna
ENSJJAG00000000530	Pum1	85	82.716	ENSPMEG00000019543	pum1	99	78.197	Poecilia_mexicana
ENSJJAG00000000530	Pum1	100	80.693	ENSPREG00000005195	pum1	100	80.727	Poecilia_reticulata
ENSJJAG00000000530	Pum1	100	100.000	ENSPPYG00000001621	PUM1	100	97.195	Pongo_abelii
ENSJJAG00000000530	Pum1	84	99.174	ENSPCAG00000001979	PUM1	74	99.174	Procavia_capensis
ENSJJAG00000000530	Pum1	100	99.306	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSJJAG00000000530	Pum1	100	100.000	ENSPVAG00000005207	PUM1	97	96.801	Pteropus_vampyrus
ENSJJAG00000000530	Pum1	100	81.188	ENSPNYG00000009518	pum1	100	81.687	Pundamilia_nyererei
ENSJJAG00000000530	Pum1	100	84.739	ENSPNAG00000026728	pum1	100	80.585	Pygocentrus_nattereri
ENSJJAG00000000530	Pum1	100	99.306	ENSRNOG00000011709	Pum1	100	98.737	Rattus_norvegicus
ENSJJAG00000000530	Pum1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSJJAG00000000530	Pum1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSJJAG00000000530	Pum1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSJJAG00000000530	Pum1	100	97.143	ENSSHAG00000010918	PUM1	100	97.143	Sarcophilus_harrisii
ENSJJAG00000000530	Pum1	100	81.188	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSJJAG00000000530	Pum1	100	81.188	ENSSDUG00000009021	pum1	100	76.694	Seriola_dumerili
ENSJJAG00000000530	Pum1	100	81.188	ENSSLDG00000009667	pum1	100	78.756	Seriola_lalandi_dorsalis
ENSJJAG00000000530	Pum1	99	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSJJAG00000000530	Pum1	100	97.136	ENSSPUG00000006267	PUM1	100	96.717	Sphenodon_punctatus
ENSJJAG00000000530	Pum1	90	91.566	ENSSPAG00000016636	pum1	100	77.606	Stegastes_partitus
ENSJJAG00000000530	Pum1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSJJAG00000000530	Pum1	100	81.188	ENSTRUG00000013121	pum1	100	83.086	Takifugu_rubripes
ENSJJAG00000000530	Pum1	100	80.964	ENSTNIG00000016983	pum1	99	76.680	Tetraodon_nigroviridis
ENSJJAG00000000530	Pum1	84	100.000	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSJJAG00000000530	Pum1	92	98.905	ENSTTRG00000007436	PUM1	90	98.905	Tursiops_truncatus
ENSJJAG00000000530	Pum1	98	100.000	ENSUAMG00000018262	-	100	98.616	Ursus_americanus
ENSJJAG00000000530	Pum1	95	99.034	ENSUMAG00000009211	PUM1	100	99.034	Ursus_maritimus
ENSJJAG00000000530	Pum1	100	99.306	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSJJAG00000000530	Pum1	100	100.000	ENSVVUG00000014631	PUM1	100	99.034	Vulpes_vulpes
ENSJJAG00000000530	Pum1	100	88.571	ENSXETG00000012904	pum1	99	87.406	Xenopus_tropicalis
ENSJJAG00000000530	Pum1	100	80.817	ENSXMAG00000002945	pum1	100	77.824	Xiphophorus_maculatus