EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000000633 (Gene tree)
Gene ID: 101616541
Gene Symbol: Cnot1
Alias: 6030411K04Rik
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 132861 bases
Position: chrJH725498.1:9186887-9319747
Accession: 101616541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000000840	Not1	PF04054.15	2.3e-152	1	1
ENSJJAP00000000847	Not1	PF04054.15	1.3e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000000889	-	7681	XM_004663489	ENSJJAP00000000840	2376 (aa)	XP_004663546	UPI000332EC58
ENSJJAT00000000900	-	6981	XM_004663494	ENSJJAP00000000847	2326 (aa)	XP_004663551	UPI000332F6E5

Gene Model

Click here to download ENSJJAG00000000633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000000633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000000633	Cnot1	100	98.990	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSJJAG00000000633	Cnot1	97	96.353	ENSAPOG00000005042	cnot1	100	96.353	Acanthochromis_polyacanthus
ENSJJAG00000000633	Cnot1	100	98.822	ENSAMEG00000017298	CNOT1	100	98.822	Ailuropoda_melanoleuca
ENSJJAG00000000633	Cnot1	90	89.329	ENSACIG00000016003	cnot1	100	89.655	Amphilophus_citrinellus
ENSJJAG00000000633	Cnot1	100	89.924	ENSAPEG00000022342	cnot1	100	89.882	Amphiprion_percula
ENSJJAG00000000633	Cnot1	97	96.494	ENSATEG00000012892	cnot1	100	96.494	Anabas_testudineus
ENSJJAG00000000633	Cnot1	100	97.059	ENSAPLG00000007162	CNOT1	100	97.059	Anas_platyrhynchos
ENSJJAG00000000633	Cnot1	92	95.315	ENSACAG00000001602	CNOT1	98	95.547	Anolis_carolinensis
ENSJJAG00000000633	Cnot1	100	97.635	ENSANAG00000038198	CNOT1	100	97.635	Aotus_nancymaae
ENSJJAG00000000633	Cnot1	97	96.494	ENSACLG00000014234	cnot1	100	96.494	Astatotilapia_calliptera
ENSJJAG00000000633	Cnot1	100	90.408	ENSAMXG00000013170	cnot1	100	90.917	Astyanax_mexicanus
ENSJJAG00000000633	Cnot1	100	99.074	ENSBTAG00000020782	CNOT1	100	99.074	Bos_taurus
ENSJJAG00000000633	Cnot1	81	40.115	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSJJAG00000000633	Cnot1	100	98.948	ENSCJAG00000011318	CNOT1	100	98.948	Callithrix_jacchus
ENSJJAG00000000633	Cnot1	100	98.740	ENSCAFG00000008426	CNOT1	100	98.740	Canis_familiaris
ENSJJAG00000000633	Cnot1	100	99.054	ENSCAFG00020010156	CNOT1	100	99.054	Canis_lupus_dingo
ENSJJAG00000000633	Cnot1	100	99.074	ENSCHIG00000010452	CNOT1	100	99.074	Capra_hircus
ENSJJAG00000000633	Cnot1	100	99.140	ENSTSYG00000006888	CNOT1	100	99.140	Carlito_syrichta
ENSJJAG00000000633	Cnot1	100	94.444	ENSCPOG00000013026	CNOT1	100	94.444	Cavia_porcellus
ENSJJAG00000000633	Cnot1	100	97.420	ENSCCAG00000026333	CNOT1	100	97.420	Cebus_capucinus
ENSJJAG00000000633	Cnot1	100	99.054	ENSCATG00000032625	CNOT1	100	99.054	Cercocebus_atys
ENSJJAG00000000633	Cnot1	100	99.158	ENSCLAG00000006289	CNOT1	100	99.158	Chinchilla_lanigera
ENSJJAG00000000633	Cnot1	100	99.032	ENSCSAG00000004731	CNOT1	100	99.032	Chlorocebus_sabaeus
ENSJJAG00000000633	Cnot1	81	98.587	ENSCHOG00000009712	CNOT1	83	98.587	Choloepus_hoffmanni
ENSJJAG00000000633	Cnot1	98	95.048	ENSCPBG00000026222	CNOT1	99	97.917	Chrysemys_picta_bellii
ENSJJAG00000000633	Cnot1	100	58.853	ENSCING00000009149	-	100	58.548	Ciona_intestinalis
ENSJJAG00000000633	Cnot1	89	62.693	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSJJAG00000000633	Cnot1	100	97.175	ENSCANG00000040534	CNOT1	100	97.175	Colobus_angolensis_palliatus
ENSJJAG00000000633	Cnot1	100	98.882	ENSCGRG00001016365	Cnot1	100	98.882	Cricetulus_griseus_chok1gshd
ENSJJAG00000000633	Cnot1	100	98.882	ENSCGRG00000001714	Cnot1	100	98.882	Cricetulus_griseus_crigri
ENSJJAG00000000633	Cnot1	100	82.485	ENSCVAG00000018930	cnot1	100	82.360	Cyprinodon_variegatus
ENSJJAG00000000633	Cnot1	100	89.438	ENSDARG00000004174	cnot1	100	89.355	Danio_rerio
ENSJJAG00000000633	Cnot1	100	96.508	ENSDNOG00000013250	CNOT1	100	96.508	Dasypus_novemcinctus
ENSJJAG00000000633	Cnot1	99	46.069	FBgn0085436	Not1	99	48.276	Drosophila_melanogaster
ENSJJAG00000000633	Cnot1	84	96.837	ENSETEG00000012806	CNOT1	84	96.837	Echinops_telfairi
ENSJJAG00000000633	Cnot1	81	81.731	ENSEBUG00000011534	cnot1	95	81.731	Eptatretus_burgeri
ENSJJAG00000000633	Cnot1	100	95.300	ENSEASG00005005819	CNOT1	100	98.204	Equus_asinus_asinus
ENSJJAG00000000633	Cnot1	100	99.116	ENSECAG00000009889	CNOT1	100	99.206	Equus_caballus
ENSJJAG00000000633	Cnot1	90	98.433	ENSEEUG00000006015	CNOT1	90	98.433	Erinaceus_europaeus
ENSJJAG00000000633	Cnot1	100	89.156	ENSELUG00000014085	cnot1	100	88.838	Esox_lucius
ENSJJAG00000000633	Cnot1	100	98.825	ENSFCAG00000025155	CNOT1	100	98.825	Felis_catus
ENSJJAG00000000633	Cnot1	100	97.096	ENSFALG00000007285	CNOT1	100	97.096	Ficedula_albicollis
ENSJJAG00000000633	Cnot1	100	99.183	ENSFDAG00000013399	CNOT1	100	99.183	Fukomys_damarensis
ENSJJAG00000000633	Cnot1	100	89.752	ENSFHEG00000020574	cnot1	100	89.752	Fundulus_heteroclitus
ENSJJAG00000000633	Cnot1	92	89.054	ENSGMOG00000012864	cnot1	100	89.425	Gadus_morhua
ENSJJAG00000000633	Cnot1	100	97.138	ENSGALG00000002301	CNOT1	100	97.138	Gallus_gallus
ENSJJAG00000000633	Cnot1	100	88.665	ENSGAFG00000015005	cnot1	100	88.623	Gambusia_affinis
ENSJJAG00000000633	Cnot1	92	89.847	ENSGACG00000002606	cnot1	100	95.267	Gasterosteus_aculeatus
ENSJJAG00000000633	Cnot1	100	97.265	ENSGAGG00000022646	CNOT1	100	97.265	Gopherus_agassizii
ENSJJAG00000000633	Cnot1	100	98.948	ENSGGOG00000009547	CNOT1	100	98.948	Gorilla_gorilla
ENSJJAG00000000633	Cnot1	97	96.494	ENSHBUG00000001729	cnot1	100	96.494	Haplochromis_burtoni
ENSJJAG00000000633	Cnot1	100	99.097	ENSHGLG00000014322	CNOT1	100	99.097	Heterocephalus_glaber_female
ENSJJAG00000000633	Cnot1	100	88.796	ENSHCOG00000006501	cnot1	100	88.935	Hippocampus_comes
ENSJJAG00000000633	Cnot1	100	88.255	ENSIPUG00000011915	cnot1	100	88.716	Ictalurus_punctatus
ENSJJAG00000000633	Cnot1	100	99.097	ENSSTOG00000005490	CNOT1	100	99.097	Ictidomys_tridecemlineatus
ENSJJAG00000000633	Cnot1	100	89.628	ENSKMAG00000006149	cnot1	100	89.507	Kryptolebias_marmoratus
ENSJJAG00000000633	Cnot1	95	95.808	ENSLBEG00000004740	cnot1	100	95.808	Labrus_bergylta
ENSJJAG00000000633	Cnot1	100	94.360	ENSLACG00000010869	CNOT1	100	94.360	Latimeria_chalumnae
ENSJJAG00000000633	Cnot1	100	92.366	ENSLOCG00000006324	cnot1	100	92.366	Lepisosteus_oculatus
ENSJJAG00000000633	Cnot1	100	98.865	ENSLAFG00000000098	CNOT1	100	98.865	Loxodonta_africana
ENSJJAG00000000633	Cnot1	100	99.054	ENSMFAG00000035888	CNOT1	100	99.054	Macaca_fascicularis
ENSJJAG00000000633	Cnot1	100	99.011	ENSMMUG00000014625	CNOT1	100	99.011	Macaca_mulatta
ENSJJAG00000000633	Cnot1	100	96.518	ENSMNEG00000031820	CNOT1	100	99.159	Macaca_nemestrina
ENSJJAG00000000633	Cnot1	100	97.850	ENSMLEG00000040933	CNOT1	100	97.850	Mandrillus_leucophaeus
ENSJJAG00000000633	Cnot1	100	88.628	ENSMAMG00000016524	cnot1	100	88.707	Mastacembelus_armatus
ENSJJAG00000000633	Cnot1	97	96.494	ENSMZEG00005016210	cnot1	100	96.494	Maylandia_zebra
ENSJJAG00000000633	Cnot1	100	96.886	ENSMGAG00000001908	CNOT1	100	96.886	Meleagris_gallopavo
ENSJJAG00000000633	Cnot1	100	98.925	ENSMICG00000007071	CNOT1	100	98.925	Microcebus_murinus
ENSJJAG00000000633	Cnot1	100	98.925	ENSMOCG00000017969	Cnot1	100	98.925	Microtus_ochrogaster
ENSJJAG00000000633	Cnot1	97	93.128	ENSMMOG00000019134	cnot1	100	93.128	Mola_mola
ENSJJAG00000000633	Cnot1	100	97.308	ENSMODG00000014199	CNOT1	100	97.308	Monodelphis_domestica
ENSJJAG00000000633	Cnot1	100	89.626	ENSMALG00000008645	cnot1	100	89.668	Monopterus_albus
ENSJJAG00000000633	Cnot1	95	99.414	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.414	Mus_caroli
ENSJJAG00000000633	Cnot1	100	98.968	ENSMUSG00000036550	Cnot1	100	98.968	Mus_musculus
ENSJJAG00000000633	Cnot1	100	98.925	MGP_PahariEiJ_G0023028	Cnot1	100	98.925	Mus_pahari
ENSJJAG00000000633	Cnot1	100	98.968	MGP_SPRETEiJ_G0032549	Cnot1	100	98.968	Mus_spretus
ENSJJAG00000000633	Cnot1	100	99.116	ENSMPUG00000004830	CNOT1	100	99.116	Mustela_putorius_furo
ENSJJAG00000000633	Cnot1	100	98.443	ENSMLUG00000003728	CNOT1	100	98.443	Myotis_lucifugus
ENSJJAG00000000633	Cnot1	100	99.183	ENSNGAG00000018628	Cnot1	100	99.183	Nannospalax_galili
ENSJJAG00000000633	Cnot1	94	96.494	ENSNBRG00000019358	cnot1	100	96.494	Neolamprologus_brichardi
ENSJJAG00000000633	Cnot1	100	98.968	ENSNLEG00000003566	CNOT1	100	98.968	Nomascus_leucogenys
ENSJJAG00000000633	Cnot1	86	96.250	ENSMEUG00000006145	CNOT1	87	96.250	Notamacropus_eugenii
ENSJJAG00000000633	Cnot1	86	99.111	ENSOPRG00000005604	CNOT1	86	99.111	Ochotona_princeps
ENSJJAG00000000633	Cnot1	100	99.140	ENSODEG00000016337	CNOT1	100	99.140	Octodon_degus
ENSJJAG00000000633	Cnot1	100	89.992	ENSONIG00000007358	cnot1	100	89.586	Oreochromis_niloticus
ENSJJAG00000000633	Cnot1	92	97.577	ENSOANG00000012109	CNOT1	100	97.743	Ornithorhynchus_anatinus
ENSJJAG00000000633	Cnot1	100	99.032	ENSOCUG00000006911	CNOT1	100	99.032	Oryctolagus_cuniculus
ENSJJAG00000000633	Cnot1	100	89.727	ENSORLG00000013734	cnot1	100	89.765	Oryzias_latipes
ENSJJAG00000000633	Cnot1	100	90.219	ENSORLG00020017012	cnot1	100	89.889	Oryzias_latipes_hni
ENSJJAG00000000633	Cnot1	100	90.133	ENSORLG00015007091	cnot1	100	89.632	Oryzias_latipes_hsok
ENSJJAG00000000633	Cnot1	100	89.456	ENSOMEG00000015124	cnot1	100	89.751	Oryzias_melastigma
ENSJJAG00000000633	Cnot1	100	98.948	ENSOGAG00000000543	CNOT1	100	98.948	Otolemur_garnettii
ENSJJAG00000000633	Cnot1	100	99.074	ENSOARG00000001567	CNOT1	100	99.074	Ovis_aries
ENSJJAG00000000633	Cnot1	100	99.011	ENSPPAG00000022013	CNOT1	100	99.011	Pan_paniscus
ENSJJAG00000000633	Cnot1	100	99.116	ENSPPRG00000004867	CNOT1	100	99.116	Panthera_pardus
ENSJJAG00000000633	Cnot1	100	99.116	ENSPTIG00000012589	CNOT1	100	99.116	Panthera_tigris_altaica
ENSJJAG00000000633	Cnot1	100	99.011	ENSPTRG00000008183	CNOT1	100	99.011	Pan_troglodytes
ENSJJAG00000000633	Cnot1	100	95.557	ENSPANG00000020901	CNOT1	100	95.557	Papio_anubis
ENSJJAG00000000633	Cnot1	97	92.697	ENSPKIG00000002914	CNOT1	99	92.697	Paramormyrops_kingsleyae
ENSJJAG00000000633	Cnot1	100	91.565	ENSPKIG00000023538	CNOT1	100	91.733	Paramormyrops_kingsleyae
ENSJJAG00000000633	Cnot1	100	97.138	ENSPSIG00000005499	CNOT1	100	97.138	Pelodiscus_sinensis
ENSJJAG00000000633	Cnot1	100	80.789	ENSPMAG00000009381	cnot1	100	80.688	Petromyzon_marinus
ENSJJAG00000000633	Cnot1	100	97.165	ENSPCIG00000007343	CNOT1	100	97.917	Phascolarctos_cinereus
ENSJJAG00000000633	Cnot1	99	89.340	ENSPFOG00000003497	cnot1	100	89.302	Poecilia_formosa
ENSJJAG00000000633	Cnot1	95	95.409	ENSPLAG00000014018	cnot1	100	95.409	Poecilia_latipinna
ENSJJAG00000000633	Cnot1	95	95.409	ENSPMEG00000005868	cnot1	100	95.409	Poecilia_mexicana
ENSJJAG00000000633	Cnot1	95	95.409	ENSPREG00000018793	cnot1	100	95.409	Poecilia_reticulata
ENSJJAG00000000633	Cnot1	100	98.948	ENSPPYG00000007410	CNOT1	100	98.948	Pongo_abelii
ENSJJAG00000000633	Cnot1	90	96.508	ENSPCAG00000003241	CNOT1	90	96.508	Procavia_capensis
ENSJJAG00000000633	Cnot1	100	98.968	ENSPCOG00000027139	CNOT1	100	98.968	Propithecus_coquereli
ENSJJAG00000000633	Cnot1	100	96.465	ENSPVAG00000004243	CNOT1	100	96.465	Pteropus_vampyrus
ENSJJAG00000000633	Cnot1	97	96.494	ENSPNYG00000012919	cnot1	100	96.494	Pundamilia_nyererei
ENSJJAG00000000633	Cnot1	100	89.356	ENSPNAG00000000246	cnot1	100	89.777	Pygocentrus_nattereri
ENSJJAG00000000633	Cnot1	100	98.864	ENSRNOG00000012271	Cnot1	100	98.864	Rattus_norvegicus
ENSJJAG00000000633	Cnot1	100	97.037	ENSRBIG00000044598	CNOT1	100	97.037	Rhinopithecus_bieti
ENSJJAG00000000633	Cnot1	100	99.054	ENSRROG00000000906	CNOT1	100	99.054	Rhinopithecus_roxellana
ENSJJAG00000000633	Cnot1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSJJAG00000000633	Cnot1	100	95.069	ENSSBOG00000029155	CNOT1	100	95.069	Saimiri_boliviensis_boliviensis
ENSJJAG00000000633	Cnot1	100	97.393	ENSSHAG00000012187	CNOT1	100	97.393	Sarcophilus_harrisii
ENSJJAG00000000633	Cnot1	100	91.991	ENSSFOG00015017614	cnot1	100	91.731	Scleropages_formosus
ENSJJAG00000000633	Cnot1	97	96.494	ENSSMAG00000013844	cnot1	100	96.494	Scophthalmus_maximus
ENSJJAG00000000633	Cnot1	97	96.353	ENSSDUG00000021491	cnot1	100	96.353	Seriola_dumerili
ENSJJAG00000000633	Cnot1	97	96.353	ENSSLDG00000014816	cnot1	100	96.353	Seriola_lalandi_dorsalis
ENSJJAG00000000633	Cnot1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSJJAG00000000633	Cnot1	100	90.013	ENSSPAG00000018802	cnot1	100	89.803	Stegastes_partitus
ENSJJAG00000000633	Cnot1	100	98.948	ENSSSCG00000002799	CNOT1	100	98.948	Sus_scrofa
ENSJJAG00000000633	Cnot1	100	96.974	ENSTGUG00000005919	CNOT1	100	96.974	Taeniopygia_guttata
ENSJJAG00000000633	Cnot1	100	88.360	ENSTNIG00000018706	cnot1	100	88.208	Tetraodon_nigroviridis
ENSJJAG00000000633	Cnot1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSJJAG00000000633	Cnot1	95	99.301	ENSTTRG00000008460	CNOT1	95	99.301	Tursiops_truncatus
ENSJJAG00000000633	Cnot1	100	99.116	ENSUAMG00000009251	CNOT1	100	99.116	Ursus_americanus
ENSJJAG00000000633	Cnot1	100	99.116	ENSUMAG00000021291	CNOT1	100	99.116	Ursus_maritimus
ENSJJAG00000000633	Cnot1	97	96.447	ENSVPAG00000008846	CNOT1	97	96.447	Vicugna_pacos
ENSJJAG00000000633	Cnot1	100	97.987	ENSVVUG00000024037	CNOT1	100	98.689	Vulpes_vulpes
ENSJJAG00000000633	Cnot1	100	89.631	ENSXETG00000015900	cnot1	100	89.421	Xenopus_tropicalis
ENSJJAG00000000633	Cnot1	100	88.833	ENSXCOG00000013552	cnot1	100	88.791	Xiphophorus_couchianus
ENSJJAG00000000633	Cnot1	100	88.875	ENSXMAG00000006031	cnot1	100	88.833	Xiphophorus_maculatus