EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000000836 (Gene tree)
Gene ID: 101602363
Gene Symbol: Prpf6
Alias: 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 60947 bases
Position: chrJH725567.1:5524950-5585896
Accession: 101602363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000000991	PRP1_N	PF06424.12	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000001101	-	2926	XM_004669527	ENSJJAP00000000991	941 (aa)	XP_004669584	UPI000332FE0F

Gene Model

Click here to download ENSJJAG00000000836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000000836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000000836	Prpf6	100	98.087	ENSG00000101161	PRPF6	100	98.087	Homo_sapiens
ENSJJAG00000000836	Prpf6	100	93.092	ENSAPOG00000010395	prpf6	96	93.518	Acanthochromis_polyacanthus
ENSJJAG00000000836	Prpf6	100	97.665	ENSAMEG00000001916	PRPF6	99	97.665	Ailuropoda_melanoleuca
ENSJJAG00000000836	Prpf6	100	92.880	ENSACIG00000019862	prpf6	96	93.305	Amphilophus_citrinellus
ENSJJAG00000000836	Prpf6	100	93.092	ENSAOCG00000012988	prpf6	96	93.518	Amphiprion_ocellaris
ENSJJAG00000000836	Prpf6	100	86.397	ENSAPEG00000008301	prpf6	100	86.929	Amphiprion_percula
ENSJJAG00000000836	Prpf6	100	92.561	ENSATEG00000005581	prpf6	96	92.986	Anabas_testudineus
ENSJJAG00000000836	Prpf6	100	98.087	ENSACAG00000006464	PRPF6	95	98.087	Anolis_carolinensis
ENSJJAG00000000836	Prpf6	100	98.193	ENSANAG00000012661	PRPF6	100	98.822	Aotus_nancymaae
ENSJJAG00000000836	Prpf6	100	92.774	ENSACLG00000025875	prpf6	96	93.199	Astatotilapia_calliptera
ENSJJAG00000000836	Prpf6	99	93.085	ENSAMXG00000001929	prpf6	96	93.511	Astyanax_mexicanus
ENSJJAG00000000836	Prpf6	100	98.406	ENSBTAG00000011656	PRPF6	100	98.406	Bos_taurus
ENSJJAG00000000836	Prpf6	100	98.193	ENSCJAG00000010616	PRPF6	100	98.193	Callithrix_jacchus
ENSJJAG00000000836	Prpf6	100	98.725	ENSCAFG00000013165	PRPF6	100	98.725	Canis_familiaris
ENSJJAG00000000836	Prpf6	100	98.725	ENSCAFG00020002050	PRPF6	100	98.725	Canis_lupus_dingo
ENSJJAG00000000836	Prpf6	100	98.406	ENSCHIG00000018187	PRPF6	100	98.406	Capra_hircus
ENSJJAG00000000836	Prpf6	100	98.831	ENSTSYG00000007814	PRPF6	100	98.831	Carlito_syrichta
ENSJJAG00000000836	Prpf6	97	98.473	ENSCAPG00000015077	PRPF6	100	98.473	Cavia_aperea
ENSJJAG00000000836	Prpf6	100	99.787	ENSCPOG00000007518	PRPF6	100	99.787	Cavia_porcellus
ENSJJAG00000000836	Prpf6	100	95.005	ENSCCAG00000024564	PRPF6	100	95.005	Cebus_capucinus
ENSJJAG00000000836	Prpf6	100	97.981	ENSCATG00000037473	PRPF6	100	97.981	Cercocebus_atys
ENSJJAG00000000836	Prpf6	100	95.749	ENSCLAG00000003854	PRPF6	100	95.749	Chinchilla_lanigera
ENSJJAG00000000836	Prpf6	100	92.925	ENSCSAG00000016742	PRPF6	100	92.925	Chlorocebus_sabaeus
ENSJJAG00000000836	Prpf6	85	81.301	ENSCHOG00000003315	-	100	81.301	Choloepus_hoffmanni
ENSJJAG00000000836	Prpf6	100	98.406	ENSCPBG00000013964	PRPF6	96	98.406	Chrysemys_picta_bellii
ENSJJAG00000000836	Prpf6	99	73.679	ENSCING00000008817	-	99	73.679	Ciona_intestinalis
ENSJJAG00000000836	Prpf6	100	97.981	ENSCANG00000038230	PRPF6	100	97.981	Colobus_angolensis_palliatus
ENSJJAG00000000836	Prpf6	100	99.469	ENSCGRG00001022666	Prpf6	100	99.469	Cricetulus_griseus_chok1gshd
ENSJJAG00000000836	Prpf6	100	87.354	ENSCSEG00000018561	prpf6	100	87.779	Cynoglossus_semilaevis
ENSJJAG00000000836	Prpf6	100	93.092	ENSCVAG00000010550	prpf6	96	93.518	Cyprinodon_variegatus
ENSJJAG00000000836	Prpf6	100	92.667	ENSDARG00000091367	prpf6	99	93.092	Danio_rerio
ENSJJAG00000000836	Prpf6	100	97.768	ENSDNOG00000040544	PRPF6	100	97.768	Dasypus_novemcinctus
ENSJJAG00000000836	Prpf6	91	98.598	ENSDORG00000005406	Prpf6	100	98.598	Dipodomys_ordii
ENSJJAG00000000836	Prpf6	99	71.888	FBgn0036828	CG6841	98	72.318	Drosophila_melanogaster
ENSJJAG00000000836	Prpf6	85	95.906	ENSETEG00000004447	PRPF6	85	95.906	Echinops_telfairi
ENSJJAG00000000836	Prpf6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSJJAG00000000836	Prpf6	100	98.618	ENSEASG00005023115	PRPF6	100	98.618	Equus_asinus_asinus
ENSJJAG00000000836	Prpf6	100	94.368	ENSECAG00000013983	PRPF6	100	94.368	Equus_caballus
ENSJJAG00000000836	Prpf6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSJJAG00000000836	Prpf6	100	91.605	ENSELUG00000001945	prpf6	93	91.605	Esox_lucius
ENSJJAG00000000836	Prpf6	100	98.725	ENSFCAG00000001183	PRPF6	100	98.725	Felis_catus
ENSJJAG00000000836	Prpf6	100	98.300	ENSFALG00000010326	-	97	98.300	Ficedula_albicollis
ENSJJAG00000000836	Prpf6	100	90.648	ENSFALG00000006046	-	97	90.648	Ficedula_albicollis
ENSJJAG00000000836	Prpf6	100	98.300	ENSFDAG00000006451	PRPF6	100	99.773	Fukomys_damarensis
ENSJJAG00000000836	Prpf6	100	93.730	ENSFHEG00000000560	prpf6	96	93.730	Fundulus_heteroclitus
ENSJJAG00000000836	Prpf6	100	89.535	ENSGMOG00000015622	prpf6	99	89.535	Gadus_morhua
ENSJJAG00000000836	Prpf6	100	98.087	ENSGALG00000006001	PRPF6	100	98.087	Gallus_gallus
ENSJJAG00000000836	Prpf6	100	88.629	ENSGAFG00000021109	prpf6	96	89.054	Gambusia_affinis
ENSJJAG00000000836	Prpf6	100	91.605	ENSGACG00000002576	prpf6	99	91.605	Gasterosteus_aculeatus
ENSJJAG00000000836	Prpf6	100	98.300	ENSGAGG00000008653	PRPF6	96	98.300	Gopherus_agassizii
ENSJJAG00000000836	Prpf6	100	98.087	ENSGGOG00000016876	PRPF6	100	98.087	Gorilla_gorilla
ENSJJAG00000000836	Prpf6	100	92.774	ENSHBUG00000004496	prpf6	96	93.199	Haplochromis_burtoni
ENSJJAG00000000836	Prpf6	100	99.681	ENSHGLG00000009222	PRPF6	100	99.681	Heterocephalus_glaber_female
ENSJJAG00000000836	Prpf6	97	99.673	ENSHGLG00100016600	PRPF6	100	99.673	Heterocephalus_glaber_male
ENSJJAG00000000836	Prpf6	100	91.605	ENSHCOG00000011513	prpf6	96	92.030	Hippocampus_comes
ENSJJAG00000000836	Prpf6	100	93.624	ENSIPUG00000004912	prpf6	96	93.624	Ictalurus_punctatus
ENSJJAG00000000836	Prpf6	100	97.028	ENSSTOG00000002922	PRPF6	100	97.028	Ictidomys_tridecemlineatus
ENSJJAG00000000836	Prpf6	100	92.561	ENSKMAG00000017800	prpf6	96	92.986	Kryptolebias_marmoratus
ENSJJAG00000000836	Prpf6	100	92.242	ENSLBEG00000012582	prpf6	96	92.242	Labrus_bergylta
ENSJJAG00000000836	Prpf6	100	94.793	ENSLOCG00000004827	prpf6	96	93.836	Lepisosteus_oculatus
ENSJJAG00000000836	Prpf6	100	97.875	ENSLAFG00000005272	PRPF6	100	97.875	Loxodonta_africana
ENSJJAG00000000836	Prpf6	100	97.981	ENSMFAG00000037542	PRPF6	100	97.981	Macaca_fascicularis
ENSJJAG00000000836	Prpf6	100	91.401	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSJJAG00000000836	Prpf6	100	83.686	ENSMNEG00000045555	PRPF6	100	83.686	Macaca_nemestrina
ENSJJAG00000000836	Prpf6	100	92.880	ENSMAMG00000010718	prpf6	96	93.305	Mastacembelus_armatus
ENSJJAG00000000836	Prpf6	94	92.290	ENSMZEG00005026539	prpf6	100	92.744	Maylandia_zebra
ENSJJAG00000000836	Prpf6	100	92.251	ENSMZEG00005015261	-	99	92.675	Maylandia_zebra
ENSJJAG00000000836	Prpf6	97	98.255	ENSMGAG00000006634	PRPF6	100	98.255	Meleagris_gallopavo
ENSJJAG00000000836	Prpf6	100	99.469	ENSMAUG00000013969	Prpf6	100	99.469	Mesocricetus_auratus
ENSJJAG00000000836	Prpf6	87	98.297	ENSMICG00000017793	PRPF6	99	98.297	Microcebus_murinus
ENSJJAG00000000836	Prpf6	100	99.362	ENSMOCG00000001701	Prpf6	100	99.362	Microtus_ochrogaster
ENSJJAG00000000836	Prpf6	100	91.923	ENSMMOG00000020419	prpf6	100	92.349	Mola_mola
ENSJJAG00000000836	Prpf6	99	99.014	ENSMODG00000017051	PRPF6	99	99.014	Monodelphis_domestica
ENSJJAG00000000836	Prpf6	99	93.018	ENSMALG00000000089	prpf6	100	93.018	Monopterus_albus
ENSJJAG00000000836	Prpf6	100	92.880	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSJJAG00000000836	Prpf6	100	99.469	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSJJAG00000000836	Prpf6	100	99.469	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSJJAG00000000836	Prpf6	100	99.469	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSJJAG00000000836	Prpf6	91	98.093	ENSMPUG00000008673	PRPF6	99	98.093	Mustela_putorius_furo
ENSJJAG00000000836	Prpf6	100	99.681	ENSNGAG00000003365	Prpf6	100	99.681	Nannospalax_galili
ENSJJAG00000000836	Prpf6	100	92.880	ENSNBRG00000015025	prpf6	96	93.305	Neolamprologus_brichardi
ENSJJAG00000000836	Prpf6	100	97.981	ENSNLEG00000010208	PRPF6	100	97.981	Nomascus_leucogenys
ENSJJAG00000000836	Prpf6	100	89.130	ENSMEUG00000009824	-	90	89.130	Notamacropus_eugenii
ENSJJAG00000000836	Prpf6	100	93.730	ENSODEG00000004841	PRPF6	100	93.730	Octodon_degus
ENSJJAG00000000836	Prpf6	100	92.774	ENSONIG00000017406	prpf6	96	93.199	Oreochromis_niloticus
ENSJJAG00000000836	Prpf6	100	98.618	ENSOANG00000004920	PRPF6	100	98.618	Ornithorhynchus_anatinus
ENSJJAG00000000836	Prpf6	99	97.103	ENSOCUG00000014151	PRPF6	100	97.103	Oryctolagus_cuniculus
ENSJJAG00000000836	Prpf6	100	92.561	ENSORLG00000009592	prpf6	96	92.561	Oryzias_latipes
ENSJJAG00000000836	Prpf6	100	92.667	ENSORLG00020001458	prpf6	96	92.667	Oryzias_latipes_hni
ENSJJAG00000000836	Prpf6	100	92.667	ENSORLG00015018762	prpf6	96	92.667	Oryzias_latipes_hsok
ENSJJAG00000000836	Prpf6	100	92.561	ENSOMEG00000012174	prpf6	96	92.986	Oryzias_melastigma
ENSJJAG00000000836	Prpf6	100	91.189	ENSOGAG00000007573	PRPF6	100	91.189	Otolemur_garnettii
ENSJJAG00000000836	Prpf6	100	97.981	ENSOARG00000008776	PRPF6	99	97.981	Ovis_aries
ENSJJAG00000000836	Prpf6	100	98.087	ENSPPAG00000008686	PRPF6	100	98.087	Pan_paniscus
ENSJJAG00000000836	Prpf6	100	98.618	ENSPPRG00000008497	PRPF6	100	98.618	Panthera_pardus
ENSJJAG00000000836	Prpf6	97	98.582	ENSPTIG00000011184	PRPF6	97	98.582	Panthera_tigris_altaica
ENSJJAG00000000836	Prpf6	100	98.087	ENSPTRG00000013765	PRPF6	100	98.087	Pan_troglodytes
ENSJJAG00000000836	Prpf6	100	97.450	ENSPANG00000024135	PRPF6	100	97.450	Papio_anubis
ENSJJAG00000000836	Prpf6	100	94.368	ENSPKIG00000005627	prpf6	99	94.793	Paramormyrops_kingsleyae
ENSJJAG00000000836	Prpf6	94	98.526	ENSPSIG00000007717	PRPF6	100	98.526	Pelodiscus_sinensis
ENSJJAG00000000836	Prpf6	100	90.340	ENSPMGG00000008925	prpf6	96	90.552	Periophthalmus_magnuspinnatus
ENSJJAG00000000836	Prpf6	100	99.362	ENSPEMG00000016036	Prpf6	100	99.362	Peromyscus_maniculatus_bairdii
ENSJJAG00000000836	Prpf6	99	88.310	ENSPMAG00000006144	prpf6	99	88.310	Petromyzon_marinus
ENSJJAG00000000836	Prpf6	100	98.725	ENSPCIG00000017909	PRPF6	100	98.725	Phascolarctos_cinereus
ENSJJAG00000000836	Prpf6	100	93.305	ENSPFOG00000006431	prpf6	96	93.730	Poecilia_formosa
ENSJJAG00000000836	Prpf6	100	93.199	ENSPLAG00000005974	prpf6	96	93.624	Poecilia_latipinna
ENSJJAG00000000836	Prpf6	100	93.411	ENSPMEG00000009977	prpf6	96	93.836	Poecilia_mexicana
ENSJJAG00000000836	Prpf6	100	93.305	ENSPREG00000017993	prpf6	92	93.730	Poecilia_reticulata
ENSJJAG00000000836	Prpf6	100	97.556	ENSPPYG00000011256	PRPF6	100	97.556	Pongo_abelii
ENSJJAG00000000836	Prpf6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSJJAG00000000836	Prpf6	100	98.300	ENSPCOG00000016881	PRPF6	100	98.300	Propithecus_coquereli
ENSJJAG00000000836	Prpf6	100	92.455	ENSPVAG00000014316	PRPF6	100	92.455	Pteropus_vampyrus
ENSJJAG00000000836	Prpf6	100	76.327	ENSPNYG00000001939	prpf6	70	90.048	Pundamilia_nyererei
ENSJJAG00000000836	Prpf6	100	93.411	ENSPNAG00000015606	prpf6	96	93.836	Pygocentrus_nattereri
ENSJJAG00000000836	Prpf6	100	99.362	ENSRNOG00000051498	Prpf6	100	99.362	Rattus_norvegicus
ENSJJAG00000000836	Prpf6	100	97.981	ENSRBIG00000043613	PRPF6	100	97.981	Rhinopithecus_bieti
ENSJJAG00000000836	Prpf6	100	94.815	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSJJAG00000000836	Prpf6	91	93.772	ENSSBOG00000020632	PRPF6	93	93.772	Saimiri_boliviensis_boliviensis
ENSJJAG00000000836	Prpf6	100	98.725	ENSSHAG00000016810	PRPF6	100	98.725	Sarcophilus_harrisii
ENSJJAG00000000836	Prpf6	99	94.629	ENSSFOG00015020859	prpf6	100	95.059	Scleropages_formosus
ENSJJAG00000000836	Prpf6	100	92.136	ENSSMAG00000008112	prpf6	96	92.136	Scophthalmus_maximus
ENSJJAG00000000836	Prpf6	100	92.774	ENSSDUG00000016142	prpf6	96	93.199	Seriola_dumerili
ENSJJAG00000000836	Prpf6	100	92.774	ENSSLDG00000025283	prpf6	100	89.692	Seriola_lalandi_dorsalis
ENSJJAG00000000836	Prpf6	94	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSJJAG00000000836	Prpf6	100	92.774	ENSSPAG00000015850	prpf6	96	93.199	Stegastes_partitus
ENSJJAG00000000836	Prpf6	100	98.300	ENSSSCG00000029119	PRPF6	100	98.186	Sus_scrofa
ENSJJAG00000000836	Prpf6	100	98.406	ENSTGUG00000007221	PRPF6	99	98.406	Taeniopygia_guttata
ENSJJAG00000000836	Prpf6	100	91.711	ENSTRUG00000002920	prpf6	96	92.136	Takifugu_rubripes
ENSJJAG00000000836	Prpf6	100	85.412	ENSTNIG00000017873	prpf6	100	85.835	Tetraodon_nigroviridis
ENSJJAG00000000836	Prpf6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSJJAG00000000836	Prpf6	100	97.981	ENSTTRG00000013068	PRPF6	100	97.981	Tursiops_truncatus
ENSJJAG00000000836	Prpf6	98	97.174	ENSUMAG00000021631	PRPF6	98	97.174	Ursus_maritimus
ENSJJAG00000000836	Prpf6	100	98.725	ENSVVUG00000014948	PRPF6	100	98.725	Vulpes_vulpes
ENSJJAG00000000836	Prpf6	100	96.281	ENSXETG00000012054	prpf6	97	96.281	Xenopus_tropicalis
ENSJJAG00000000836	Prpf6	100	93.411	ENSXCOG00000008082	prpf6	96	93.836	Xiphophorus_couchianus
ENSJJAG00000000836	Prpf6	100	93.411	ENSXMAG00000015581	prpf6	96	93.836	Xiphophorus_maculatus