EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000000993 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor 45 pseudogene
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 1176 bases
Position: chrJH725452.1:414413-415588
Accession: 101594259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000001124	G-patch	PF01585.23	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000001268	-	999	-	ENSJJAP00000001124	332 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000000993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000000993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000000993	-	100	71.499	ENSJJAG00000022886	Rbm17	100	74.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000000993	-	100	70.471	ENSG00000134453	RBM17	97	87.931	Homo_sapiens
ENSJJAG00000000993	-	99	59.852	ENSAPOG00000007101	rbm17	99	61.139	Acanthochromis_polyacanthus
ENSJJAG00000000993	-	100	70.223	ENSAMEG00000002107	RBM17	100	73.566	Ailuropoda_melanoleuca
ENSJJAG00000000993	-	100	56.341	ENSACIG00000006251	rbm17	100	59.314	Amphilophus_citrinellus
ENSJJAG00000000993	-	100	60.147	ENSAOCG00000014892	rbm17	100	61.425	Amphiprion_ocellaris
ENSJJAG00000000993	-	100	60.147	ENSAPEG00000022779	rbm17	100	61.425	Amphiprion_percula
ENSJJAG00000000993	-	100	56.808	ENSATEG00000004406	rbm17	100	58.255	Anabas_testudineus
ENSJJAG00000000993	-	100	67.822	ENSAPLG00000004190	RBM17	100	71.144	Anas_platyrhynchos
ENSJJAG00000000993	-	91	68.011	ENSACAG00000005418	RBM17	99	71.081	Anolis_carolinensis
ENSJJAG00000000993	-	100	60.969	ENSANAG00000019330	-	100	64.706	Aotus_nancymaae
ENSJJAG00000000993	-	100	70.471	ENSANAG00000030127	RBM17	100	73.815	Aotus_nancymaae
ENSJJAG00000000993	-	100	56.543	ENSACLG00000003928	rbm17	100	58.477	Astatotilapia_calliptera
ENSJJAG00000000993	-	100	56.235	ENSAMXG00000005853	rbm17	100	58.588	Astyanax_mexicanus
ENSJJAG00000000993	-	100	69.975	ENSBTAG00000021951	RBM17	100	73.317	Bos_taurus
ENSJJAG00000000993	-	100	69.231	ENSBTAG00000011094	-	100	72.569	Bos_taurus
ENSJJAG00000000993	-	67	31.225	WBGene00010233	F58B3.7	60	32.016	Caenorhabditis_elegans
ENSJJAG00000000993	-	100	70.471	ENSCJAG00000020573	RBM17	100	73.815	Callithrix_jacchus
ENSJJAG00000000993	-	100	70.223	ENSCAFG00000005206	RBM17	100	73.566	Canis_familiaris
ENSJJAG00000000993	-	100	65.835	ENSCAFG00020005420	RBM17	100	69.077	Canis_lupus_dingo
ENSJJAG00000000993	-	100	69.975	ENSCHIG00000023204	-	100	73.317	Capra_hircus
ENSJJAG00000000993	-	100	70.854	ENSCHIG00000019921	-	100	73.232	Capra_hircus
ENSJJAG00000000993	-	100	70.516	ENSTSYG00000001165	RBM17	100	73.827	Carlito_syrichta
ENSJJAG00000000993	-	92	62.099	ENSCAPG00000006275	RBM17	100	64.286	Cavia_aperea
ENSJJAG00000000993	-	100	65.610	ENSCPOG00000005679	RBM17	100	70.098	Cavia_porcellus
ENSJJAG00000000993	-	100	70.471	ENSCCAG00000018655	RBM17	100	73.815	Cebus_capucinus
ENSJJAG00000000993	-	100	70.471	ENSCATG00000041566	RBM17	100	73.815	Cercocebus_atys
ENSJJAG00000000993	-	100	70.762	ENSCLAG00000012195	RBM17	99	74.074	Chinchilla_lanigera
ENSJJAG00000000993	-	100	70.471	ENSCSAG00000013564	RBM17	100	73.815	Chlorocebus_sabaeus
ENSJJAG00000000993	-	93	56.319	ENSCHOG00000005131	RBM17	98	59.945	Choloepus_hoffmanni
ENSJJAG00000000993	-	100	67.327	ENSCPBG00000019836	RBM17	100	70.398	Chrysemys_picta_bellii
ENSJJAG00000000993	-	100	34.541	ENSCSAVG00000008782	-	100	35.507	Ciona_savignyi
ENSJJAG00000000993	-	100	70.223	ENSCANG00000030987	RBM17	100	73.566	Colobus_angolensis_palliatus
ENSJJAG00000000993	-	95	62.060	ENSCANG00000023715	-	94	64.499	Colobus_angolensis_palliatus
ENSJJAG00000000993	-	100	57.584	ENSCGRG00001009256	-	100	57.584	Cricetulus_griseus_chok1gshd
ENSJJAG00000000993	-	100	71.499	ENSCGRG00001013842	Rbm17	100	74.815	Cricetulus_griseus_chok1gshd
ENSJJAG00000000993	-	100	71.499	ENSCGRG00000006907	Rbm17	100	74.815	Cricetulus_griseus_crigri
ENSJJAG00000000993	-	100	58.621	ENSCSEG00000018164	rbm17	100	59.145	Cynoglossus_semilaevis
ENSJJAG00000000993	-	100	55.198	ENSCVAG00000002476	rbm17	100	55.366	Cyprinodon_variegatus
ENSJJAG00000000993	-	100	56.941	ENSDARG00000031346	rbm17	100	57.412	Danio_rerio
ENSJJAG00000000993	-	100	70.968	ENSDNOG00000035920	RBM17	100	73.815	Dasypus_novemcinctus
ENSJJAG00000000993	-	82	70.755	ENSETEG00000006642	RBM17	100	52.369	Echinops_telfairi
ENSJJAG00000000993	-	51	57.436	ENSEBUG00000010253	rbm17	70	57.436	Eptatretus_burgeri
ENSJJAG00000000993	-	95	72.237	ENSEASG00005009236	-	99	74.797	Equus_asinus_asinus
ENSJJAG00000000993	-	100	64.286	ENSEASG00005019205	-	100	68.719	Equus_asinus_asinus
ENSJJAG00000000993	-	100	59.694	ENSECAG00000008939	RBM17	100	63.590	Equus_caballus
ENSJJAG00000000993	-	100	66.580	ENSECAG00000001379	-	100	69.010	Equus_caballus
ENSJJAG00000000993	-	82	67.742	ENSEEUG00000013077	RBM17	92	72.078	Erinaceus_europaeus
ENSJJAG00000000993	-	100	55.275	ENSELUG00000006440	rbm17	100	57.701	Esox_lucius
ENSJJAG00000000993	-	100	70.223	ENSFCAG00000031988	RBM17	100	73.566	Felis_catus
ENSJJAG00000000993	-	100	67.742	ENSFALG00000001790	RBM17	100	71.072	Ficedula_albicollis
ENSJJAG00000000993	-	100	70.762	ENSFDAG00000007470	RBM17	100	74.074	Fukomys_damarensis
ENSJJAG00000000993	-	100	57.075	ENSFHEG00000001266	rbm17	100	57.248	Fundulus_heteroclitus
ENSJJAG00000000993	-	99	55.582	ENSGMOG00000008438	rbm17	100	57.007	Gadus_morhua
ENSJJAG00000000993	-	100	67.494	ENSGALG00000006332	RBM17	100	70.823	Gallus_gallus
ENSJJAG00000000993	-	100	58.722	ENSGAFG00000019879	rbm17	100	59.214	Gambusia_affinis
ENSJJAG00000000993	-	99	57.882	ENSGACG00000019174	rbm17	99	59.606	Gasterosteus_aculeatus
ENSJJAG00000000993	-	100	67.327	ENSGAGG00000019906	RBM17	100	70.398	Gopherus_agassizii
ENSJJAG00000000993	-	100	60.391	ENSHBUG00000016624	rbm17	100	61.671	Haplochromis_burtoni
ENSJJAG00000000993	-	100	70.762	ENSHGLG00000011580	RBM17	100	74.074	Heterocephalus_glaber_female
ENSJJAG00000000993	-	100	63.733	ENSHGLG00100010556	-	100	63.733	Heterocephalus_glaber_male
ENSJJAG00000000993	-	100	70.762	ENSHGLG00100010460	RBM17	100	74.074	Heterocephalus_glaber_male
ENSJJAG00000000993	-	99	56.398	ENSHCOG00000010865	rbm17	100	57.619	Hippocampus_comes
ENSJJAG00000000993	-	100	54.801	ENSIPUG00000007699	Rbm17	100	57.143	Ictalurus_punctatus
ENSJJAG00000000993	-	100	71.253	ENSSTOG00000013591	RBM17	100	74.568	Ictidomys_tridecemlineatus
ENSJJAG00000000993	-	100	57.783	ENSKMAG00000021400	rbm17	100	58.255	Kryptolebias_marmoratus
ENSJJAG00000000993	-	100	58.924	ENSLBEG00000000881	rbm17	100	59.204	Labrus_bergylta
ENSJJAG00000000993	-	99	49.169	ENSLACG00000017297	RBM17	99	50.824	Latimeria_chalumnae
ENSJJAG00000000993	-	100	63.391	ENSLOCG00000015659	rbm17	100	64.691	Lepisosteus_oculatus
ENSJJAG00000000993	-	100	70.171	ENSLAFG00000011629	RBM17	100	73.464	Loxodonta_africana
ENSJJAG00000000993	-	100	70.471	ENSMFAG00000035521	RBM17	100	73.815	Macaca_fascicularis
ENSJJAG00000000993	-	100	70.471	ENSMMUG00000015152	RBM17	97	87.931	Macaca_mulatta
ENSJJAG00000000993	-	100	70.471	ENSMNEG00000017264	RBM17	100	73.815	Macaca_nemestrina
ENSJJAG00000000993	-	100	70.471	ENSMLEG00000029340	RBM17	100	73.815	Mandrillus_leucophaeus
ENSJJAG00000000993	-	100	57.323	ENSMAMG00000000387	rbm17	100	58.081	Mastacembelus_armatus
ENSJJAG00000000993	-	100	58.255	ENSMZEG00005015179	rbm17	100	59.479	Maylandia_zebra
ENSJJAG00000000993	-	100	66.341	ENSMGAG00000003981	RBM17	100	69.608	Meleagris_gallopavo
ENSJJAG00000000993	-	100	71.499	ENSMAUG00000019247	Rbm17	100	74.815	Mesocricetus_auratus
ENSJJAG00000000993	-	100	70.025	ENSMICG00000003976	-	100	73.333	Microcebus_murinus
ENSJJAG00000000993	-	100	64.964	ENSMICG00000041489	-	100	67.971	Microcebus_murinus
ENSJJAG00000000993	-	100	71.499	ENSMOCG00000011847	Rbm17	100	74.815	Microtus_ochrogaster
ENSJJAG00000000993	-	88	68.827	ENSMOCG00000014517	-	87	68.827	Microtus_ochrogaster
ENSJJAG00000000993	-	100	55.750	ENSMMOG00000010264	rbm17	100	56.750	Mola_mola
ENSJJAG00000000993	-	100	68.983	ENSMODG00000016648	RBM17	100	72.319	Monodelphis_domestica
ENSJJAG00000000993	-	100	56.235	ENSMALG00000010597	rbm17	100	57.882	Monopterus_albus
ENSJJAG00000000993	-	100	71.007	MGP_CAROLIEiJ_G0023173	Rbm17	100	74.321	Mus_caroli
ENSJJAG00000000993	-	100	71.007	ENSMUSG00000037197	Rbm17	100	74.321	Mus_musculus
ENSJJAG00000000993	-	100	71.007	MGP_PahariEiJ_G0019233	Rbm17	100	74.321	Mus_pahari
ENSJJAG00000000993	-	100	71.007	MGP_SPRETEiJ_G0024091	Rbm17	100	74.321	Mus_spretus
ENSJJAG00000000993	-	89	70.977	ENSMPUG00000016359	RBM17	97	74.855	Mustela_putorius_furo
ENSJJAG00000000993	-	100	67.662	ENSMLUG00000025709	-	100	70.000	Myotis_lucifugus
ENSJJAG00000000993	-	100	68.627	ENSMLUG00000002302	-	100	71.921	Myotis_lucifugus
ENSJJAG00000000993	-	100	71.499	ENSNGAG00000000741	Rbm17	100	74.815	Nannospalax_galili
ENSJJAG00000000993	-	100	56.915	ENSNGAG00000000663	-	100	56.915	Nannospalax_galili
ENSJJAG00000000993	-	100	54.568	ENSNBRG00000018148	rbm17	100	57.494	Neolamprologus_brichardi
ENSJJAG00000000993	-	100	70.471	ENSNLEG00000033350	RBM17	100	73.815	Nomascus_leucogenys
ENSJJAG00000000993	-	100	65.509	ENSMEUG00000011347	RBM17	100	68.828	Notamacropus_eugenii
ENSJJAG00000000993	-	100	61.596	ENSOPRG00000002993	RBM17	100	64.339	Ochotona_princeps
ENSJJAG00000000993	-	100	70.098	ENSODEG00000004393	RBM17	100	73.399	Octodon_degus
ENSJJAG00000000993	-	95	64.407	ENSODEG00000007286	-	94	64.407	Octodon_degus
ENSJJAG00000000993	-	100	60.636	ENSONIG00000011838	rbm17	100	61.916	Oreochromis_niloticus
ENSJJAG00000000993	-	100	68.642	ENSOANG00000015455	RBM17	100	72.208	Ornithorhynchus_anatinus
ENSJJAG00000000993	-	100	57.746	ENSORLG00000028798	rbm17	100	58.962	Oryzias_latipes
ENSJJAG00000000993	-	100	57.746	ENSORLG00020004593	rbm17	100	58.231	Oryzias_latipes_hni
ENSJJAG00000000993	-	100	60.391	ENSORLG00015000033	rbm17	100	61.671	Oryzias_latipes_hsok
ENSJJAG00000000993	-	100	57.746	ENSOMEG00000012060	rbm17	100	61.438	Oryzias_melastigma
ENSJJAG00000000993	-	100	70.270	ENSOGAG00000015687	RBM17	100	73.333	Otolemur_garnettii
ENSJJAG00000000993	-	100	69.975	ENSOARG00000012975	RBM17	100	73.317	Ovis_aries
ENSJJAG00000000993	-	100	70.471	ENSPPAG00000032347	RBM17	100	73.815	Pan_paniscus
ENSJJAG00000000993	-	100	70.223	ENSPPRG00000010706	RBM17	100	73.566	Panthera_pardus
ENSJJAG00000000993	-	100	70.223	ENSPTIG00000007596	RBM17	100	73.566	Panthera_tigris_altaica
ENSJJAG00000000993	-	100	70.471	ENSPTRG00000002265	RBM17	100	73.815	Pan_troglodytes
ENSJJAG00000000993	-	100	70.471	ENSPANG00000023425	RBM17	100	73.815	Papio_anubis
ENSJJAG00000000993	-	100	57.143	ENSPKIG00000025526	rbm17	100	57.494	Paramormyrops_kingsleyae
ENSJJAG00000000993	-	100	53.052	ENSPKIG00000005048	-	100	56.573	Paramormyrops_kingsleyae
ENSJJAG00000000993	-	100	66.093	ENSPSIG00000012332	RBM17	100	69.383	Pelodiscus_sinensis
ENSJJAG00000000993	-	100	53.641	ENSPMGG00000007980	rbm17	100	57.767	Periophthalmus_magnuspinnatus
ENSJJAG00000000993	-	100	71.499	ENSPEMG00000014320	Rbm17	100	74.815	Peromyscus_maniculatus_bairdii
ENSJJAG00000000993	-	100	69.136	ENSPCIG00000019260	-	100	72.457	Phascolarctos_cinereus
ENSJJAG00000000993	-	100	57.075	ENSPFOG00000013271	rbm17	100	57.547	Poecilia_formosa
ENSJJAG00000000993	-	100	57.311	ENSPLAG00000004455	rbm17	100	57.783	Poecilia_latipinna
ENSJJAG00000000993	-	100	59.459	ENSPMEG00000014864	rbm17	100	59.951	Poecilia_mexicana
ENSJJAG00000000993	-	100	56.604	ENSPREG00000015589	rbm17	100	57.075	Poecilia_reticulata
ENSJJAG00000000993	-	68	67.949	ENSPPYG00000019042	-	76	68.376	Pongo_abelii
ENSJJAG00000000993	-	94	58.873	ENSPPYG00000019881	-	92	59.437	Pongo_abelii
ENSJJAG00000000993	-	100	70.471	ENSPPYG00000002067	RBM17	100	73.815	Pongo_abelii
ENSJJAG00000000993	-	100	64.764	ENSPCAG00000016879	RBM17	100	68.080	Procavia_capensis
ENSJJAG00000000993	-	100	69.975	ENSPCOG00000027881	RBM17	100	73.317	Propithecus_coquereli
ENSJJAG00000000993	-	100	64.938	ENSPVAG00000015499	RBM17	100	67.830	Pteropus_vampyrus
ENSJJAG00000000993	-	100	55.696	ENSPNYG00000015274	rbm17	100	58.140	Pundamilia_nyererei
ENSJJAG00000000993	-	100	56.235	ENSPNAG00000030046	rbm17	100	58.588	Pygocentrus_nattereri
ENSJJAG00000000993	-	100	71.499	ENSRNOG00000018767	Rbm17	100	74.815	Rattus_norvegicus
ENSJJAG00000000993	-	100	70.471	ENSRBIG00000043727	RBM17	100	73.815	Rhinopithecus_bieti
ENSJJAG00000000993	-	100	70.471	ENSRROG00000044142	RBM17	100	73.815	Rhinopithecus_roxellana
ENSJJAG00000000993	-	100	70.223	ENSSBOG00000031661	-	100	73.566	Saimiri_boliviensis_boliviensis
ENSJJAG00000000993	-	100	65.394	ENSSBOG00000023653	-	100	66.412	Saimiri_boliviensis_boliviensis
ENSJJAG00000000993	-	100	68.983	ENSSHAG00000012480	-	100	72.319	Sarcophilus_harrisii
ENSJJAG00000000993	-	100	57.108	ENSSFOG00015009892	rbm17	100	59.852	Scleropages_formosus
ENSJJAG00000000993	-	100	57.178	ENSSMAG00000012368	rbm17	100	58.168	Scophthalmus_maximus
ENSJJAG00000000993	-	100	59.277	ENSSDUG00000015015	rbm17	100	60.533	Seriola_dumerili
ENSJJAG00000000993	-	100	59.277	ENSSLDG00000014486	rbm17	100	60.533	Seriola_lalandi_dorsalis
ENSJJAG00000000993	-	60	58.296	ENSSARG00000001792	-	94	62.896	Sorex_araneus
ENSJJAG00000000993	-	99	67.246	ENSSPUG00000001036	RBM17	99	70.324	Sphenodon_punctatus
ENSJJAG00000000993	-	100	59.902	ENSSPAG00000002338	rbm17	100	61.179	Stegastes_partitus
ENSJJAG00000000993	-	100	69.727	ENSSSCG00000011134	RBM17	100	73.067	Sus_scrofa
ENSJJAG00000000993	-	100	67.076	ENSTGUG00000002013	RBM17	100	70.370	Taeniopygia_guttata
ENSJJAG00000000993	-	100	56.863	ENSTRUG00000010698	rbm17	100	60.837	Takifugu_rubripes
ENSJJAG00000000993	-	100	57.767	ENSTNIG00000006892	rbm17	100	61.707	Tetraodon_nigroviridis
ENSJJAG00000000993	-	86	100.000	ENSTBEG00000014686	RBM17	80	100.000	Tupaia_belangeri
ENSJJAG00000000993	-	92	73.481	ENSTTRG00000001344	RBM17	100	77.222	Tursiops_truncatus
ENSJJAG00000000993	-	100	65.835	ENSUAMG00000009499	RBM17	100	69.077	Ursus_americanus
ENSJJAG00000000993	-	100	69.975	ENSUMAG00000012237	RBM17	100	73.317	Ursus_maritimus
ENSJJAG00000000993	-	100	62.095	ENSVPAG00000005497	RBM17	100	64.838	Vicugna_pacos
ENSJJAG00000000993	-	100	65.835	ENSVVUG00000006780	RBM17	97	74.855	Vulpes_vulpes
ENSJJAG00000000993	-	99	60.945	ENSXETG00000018123	rbm17	100	63.250	Xenopus_tropicalis
ENSJJAG00000000993	-	100	59.459	ENSXMAG00000008674	rbm17	100	59.951	Xiphophorus_maculatus