EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000001936 (Gene tree)
Gene ID: 101601414
Gene Symbol: Lsm7
Alias: 0910001B06Rik|1110033F18Rik
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 6307 bases
Position: chrJH725451.1:34705167-34711473
Accession: 1913344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000001573	LSM	PF01423.22	3.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000002397	-	312	-	ENSJJAP00000001573	103 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000001936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000001936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000001936	Lsm7	70	33.333	ENSJJAG00000016975	-	88	33.333
ENSJJAG00000001936	Lsm7	69	36.620	ENSJJAG00000006327	-	83	36.620
ENSJJAG00000001936	Lsm7	69	32.877	ENSJJAG00000009736	-	83	32.877
ENSJJAG00000001936	Lsm7	72	35.526	ENSJJAG00000009031	Lsm8	72	35.526
ENSJJAG00000001936	Lsm7	69	33.803	ENSJJAG00000014502	-	83	33.803
ENSJJAG00000001936	Lsm7	69	36.620	ENSJJAG00000015198	-	83	36.620
ENSJJAG00000001936	Lsm7	69	35.211	ENSJJAG00000011161	-	83	35.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000001936	Lsm7	98	98.020	ENSG00000130332	LSM7	98	98.020	Homo_sapiens
ENSJJAG00000001936	Lsm7	91	95.745	ENSAPOG00000015573	lsm7	83	93.750	Acanthochromis_polyacanthus
ENSJJAG00000001936	Lsm7	98	97.030	ENSAMEG00000005484	LSM7	98	97.030	Ailuropoda_melanoleuca
ENSJJAG00000001936	Lsm7	94	93.814	ENSACIG00000006498	lsm7	77	93.814	Amphilophus_citrinellus
ENSJJAG00000001936	Lsm7	99	94.175	ENSAOCG00000001077	lsm7	94	94.175	Amphiprion_ocellaris
ENSJJAG00000001936	Lsm7	99	94.175	ENSAPEG00000024447	lsm7	94	94.175	Amphiprion_percula
ENSJJAG00000001936	Lsm7	97	95.000	ENSAPEG00000000694	lsm7	97	95.000	Amphiprion_percula
ENSJJAG00000001936	Lsm7	97	95.000	ENSATEG00000008557	lsm7	97	95.000	Anabas_testudineus
ENSJJAG00000001936	Lsm7	98	89.109	ENSANAG00000022222	-	98	89.109	Aotus_nancymaae
ENSJJAG00000001936	Lsm7	98	98.020	ENSANAG00000037196	-	98	98.020	Aotus_nancymaae
ENSJJAG00000001936	Lsm7	97	94.000	ENSACLG00000021021	lsm7	97	94.000	Astatotilapia_calliptera
ENSJJAG00000001936	Lsm7	97	95.000	ENSAMXG00000037622	lsm7	97	95.000	Astyanax_mexicanus
ENSJJAG00000001936	Lsm7	98	98.020	ENSBTAG00000004521	LSM7	98	98.020	Bos_taurus
ENSJJAG00000001936	Lsm7	97	57.000	WBGene00003081	lsm-7	96	57.000	Caenorhabditis_elegans
ENSJJAG00000001936	Lsm7	52	100.000	ENSCJAG00000039713	-	66	100.000	Callithrix_jacchus
ENSJJAG00000001936	Lsm7	98	97.030	ENSCAFG00000019409	LSM7	98	97.030	Canis_familiaris
ENSJJAG00000001936	Lsm7	98	97.030	ENSCAFG00020018168	LSM7	74	97.030	Canis_lupus_dingo
ENSJJAG00000001936	Lsm7	98	98.020	ENSCHIG00000023663	LSM7	98	98.020	Capra_hircus
ENSJJAG00000001936	Lsm7	69	97.183	ENSCAPG00000014534	LSM7	100	97.183	Cavia_aperea
ENSJJAG00000001936	Lsm7	98	98.020	ENSCPOG00000014025	LSM7	100	98.020	Cavia_porcellus
ENSJJAG00000001936	Lsm7	98	98.020	ENSCCAG00000035456	LSM7	99	98.020	Cebus_capucinus
ENSJJAG00000001936	Lsm7	98	98.020	ENSCATG00000023543	LSM7	98	98.020	Cercocebus_atys
ENSJJAG00000001936	Lsm7	98	98.020	ENSCLAG00000011635	LSM7	98	98.020	Chinchilla_lanigera
ENSJJAG00000001936	Lsm7	98	98.020	ENSCSAG00000011599	LSM7	98	98.020	Chlorocebus_sabaeus
ENSJJAG00000001936	Lsm7	69	94.366	ENSCPBG00000021317	LSM7	76	94.366	Chrysemys_picta_bellii
ENSJJAG00000001936	Lsm7	93	81.250	ENSCING00000022134	-	97	81.250	Ciona_intestinalis
ENSJJAG00000001936	Lsm7	98	98.020	ENSCANG00000035525	LSM7	98	98.020	Colobus_angolensis_palliatus
ENSJJAG00000001936	Lsm7	87	88.889	ENSCGRG00001016005	-	92	88.889	Cricetulus_griseus_chok1gshd
ENSJJAG00000001936	Lsm7	98	99.010	ENSCGRG00001000807	-	98	99.010	Cricetulus_griseus_chok1gshd
ENSJJAG00000001936	Lsm7	87	88.889	ENSCGRG00000006821	-	92	88.889	Cricetulus_griseus_crigri
ENSJJAG00000001936	Lsm7	98	99.010	ENSCGRG00000014355	-	97	99.010	Cricetulus_griseus_crigri
ENSJJAG00000001936	Lsm7	97	95.000	ENSCSEG00000014900	lsm7	85	95.000	Cynoglossus_semilaevis
ENSJJAG00000001936	Lsm7	97	96.000	ENSCVAG00000021091	lsm7	93	96.000	Cyprinodon_variegatus
ENSJJAG00000001936	Lsm7	97	95.000	ENSDARG00000058328	lsm7	97	95.000	Danio_rerio
ENSJJAG00000001936	Lsm7	98	96.040	ENSDORG00000024460	Lsm7	99	96.040	Dipodomys_ordii
ENSJJAG00000001936	Lsm7	94	75.510	FBgn0261068	LSm7	89	75.510	Drosophila_melanogaster
ENSJJAG00000001936	Lsm7	98	95.050	ENSETEG00000012788	LSM7	99	95.050	Echinops_telfairi
ENSJJAG00000001936	Lsm7	97	87.000	ENSEBUG00000016992	lsm7	96	87.000	Eptatretus_burgeri
ENSJJAG00000001936	Lsm7	81	59.036	ENSEBUG00000010470	-	79	59.036	Eptatretus_burgeri
ENSJJAG00000001936	Lsm7	98	96.040	ENSECAG00000001440	LSM7	65	96.040	Equus_caballus
ENSJJAG00000001936	Lsm7	98	97.030	ENSFCAG00000003445	LSM7	98	97.030	Felis_catus
ENSJJAG00000001936	Lsm7	97	97.000	ENSFALG00000011912	LSM7	99	97.000	Ficedula_albicollis
ENSJJAG00000001936	Lsm7	93	97.917	ENSFDAG00000007661	LSM7	100	97.917	Fukomys_damarensis
ENSJJAG00000001936	Lsm7	88	95.604	ENSFHEG00000006349	lsm7	89	96.000	Fundulus_heteroclitus
ENSJJAG00000001936	Lsm7	97	95.000	ENSGMOG00000013320	lsm7	97	95.000	Gadus_morhua
ENSJJAG00000001936	Lsm7	97	96.000	ENSGAFG00000013902	lsm7	97	96.000	Gambusia_affinis
ENSJJAG00000001936	Lsm7	97	96.000	ENSGACG00000010390	lsm7	97	96.000	Gasterosteus_aculeatus
ENSJJAG00000001936	Lsm7	98	98.020	ENSGGOG00000010172	LSM7	98	98.020	Gorilla_gorilla
ENSJJAG00000001936	Lsm7	97	94.000	ENSHBUG00000004616	lsm7	97	94.000	Haplochromis_burtoni
ENSJJAG00000001936	Lsm7	98	98.020	ENSHGLG00000010587	LSM7	98	98.020	Heterocephalus_glaber_female
ENSJJAG00000001936	Lsm7	98	98.020	ENSHGLG00100000852	LSM7	98	98.020	Heterocephalus_glaber_male
ENSJJAG00000001936	Lsm7	97	94.000	ENSHCOG00000020252	lsm7	99	94.000	Hippocampus_comes
ENSJJAG00000001936	Lsm7	97	97.000	ENSIPUG00000024724	lsm7	97	97.000	Ictalurus_punctatus
ENSJJAG00000001936	Lsm7	98	98.020	ENSSTOG00000028372	LSM7	99	98.020	Ictidomys_tridecemlineatus
ENSJJAG00000001936	Lsm7	97	96.000	ENSKMAG00000022151	lsm7	97	96.000	Kryptolebias_marmoratus
ENSJJAG00000001936	Lsm7	97	95.000	ENSLBEG00000005203	lsm7	97	95.000	Labrus_bergylta
ENSJJAG00000001936	Lsm7	97	99.000	ENSLACG00000015700	LSM7	97	99.000	Latimeria_chalumnae
ENSJJAG00000001936	Lsm7	97	98.000	ENSLOCG00000004356	lsm7	97	98.000	Lepisosteus_oculatus
ENSJJAG00000001936	Lsm7	98	98.020	ENSLAFG00000029302	LSM7	98	98.020	Loxodonta_africana
ENSJJAG00000001936	Lsm7	98	98.020	ENSMFAG00000044572	LSM7	98	98.020	Macaca_fascicularis
ENSJJAG00000001936	Lsm7	98	98.020	ENSMMUG00000000452	LSM7	99	98.020	Macaca_mulatta
ENSJJAG00000001936	Lsm7	98	98.020	ENSMNEG00000004393	LSM7	98	98.020	Macaca_nemestrina
ENSJJAG00000001936	Lsm7	98	98.020	ENSMLEG00000030852	LSM7	100	98.020	Mandrillus_leucophaeus
ENSJJAG00000001936	Lsm7	97	94.000	ENSMAMG00000005410	lsm7	97	94.000	Mastacembelus_armatus
ENSJJAG00000001936	Lsm7	97	94.000	ENSMZEG00005028055	lsm7	97	94.000	Maylandia_zebra
ENSJJAG00000001936	Lsm7	97	98.000	ENSMGAG00000000750	LSM7	86	98.000	Meleagris_gallopavo
ENSJJAG00000001936	Lsm7	98	99.010	ENSMAUG00000009276	Lsm7	98	99.010	Mesocricetus_auratus
ENSJJAG00000001936	Lsm7	98	98.020	ENSMICG00000009988	-	98	98.020	Microcebus_murinus
ENSJJAG00000001936	Lsm7	98	98.020	ENSMICG00000028619	-	98	98.020	Microcebus_murinus
ENSJJAG00000001936	Lsm7	98	99.010	ENSMOCG00000016925	Lsm7	98	99.010	Microtus_ochrogaster
ENSJJAG00000001936	Lsm7	97	95.000	ENSMMOG00000019645	lsm7	95	95.000	Mola_mola
ENSJJAG00000001936	Lsm7	97	99.000	ENSMODG00000004722	LSM7	97	99.000	Monodelphis_domestica
ENSJJAG00000001936	Lsm7	97	94.000	ENSMALG00000014511	lsm7	77	94.000	Monopterus_albus
ENSJJAG00000001936	Lsm7	98	99.010	MGP_CAROLIEiJ_G0015607	Lsm7	98	99.010	Mus_caroli
ENSJJAG00000001936	Lsm7	98	99.010	ENSMUSG00000035215	Lsm7	98	99.010	Mus_musculus
ENSJJAG00000001936	Lsm7	98	99.010	MGP_PahariEiJ_G0031020	Lsm7	98	99.010	Mus_pahari
ENSJJAG00000001936	Lsm7	98	99.010	MGP_SPRETEiJ_G0016425	Lsm7	98	99.010	Mus_spretus
ENSJJAG00000001936	Lsm7	98	97.030	ENSMLUG00000013097	-	98	97.030	Myotis_lucifugus
ENSJJAG00000001936	Lsm7	98	91.089	ENSMLUG00000024002	-	93	91.089	Myotis_lucifugus
ENSJJAG00000001936	Lsm7	98	98.020	ENSNGAG00000021637	Lsm7	98	98.020	Nannospalax_galili
ENSJJAG00000001936	Lsm7	90	94.624	ENSNBRG00000001237	-	80	94.000	Neolamprologus_brichardi
ENSJJAG00000001936	Lsm7	97	94.000	ENSNBRG00000015770	lsm7	86	94.000	Neolamprologus_brichardi
ENSJJAG00000001936	Lsm7	98	98.020	ENSNLEG00000002265	LSM7	98	98.020	Nomascus_leucogenys
ENSJJAG00000001936	Lsm7	98	98.020	ENSODEG00000013590	-	98	98.020	Octodon_degus
ENSJJAG00000001936	Lsm7	98	91.089	ENSODEG00000018769	-	98	91.089	Octodon_degus
ENSJJAG00000001936	Lsm7	98	77.228	ENSODEG00000008190	-	98	77.228	Octodon_degus
ENSJJAG00000001936	Lsm7	97	94.000	ENSONIG00000001801	lsm7	86	94.000	Oreochromis_niloticus
ENSJJAG00000001936	Lsm7	97	95.000	ENSORLG00000023951	lsm7	97	95.000	Oryzias_latipes
ENSJJAG00000001936	Lsm7	97	95.000	ENSORLG00020022226	lsm7	97	95.000	Oryzias_latipes_hni
ENSJJAG00000001936	Lsm7	97	95.000	ENSORLG00015020044	lsm7	93	95.000	Oryzias_latipes_hsok
ENSJJAG00000001936	Lsm7	97	95.000	ENSOMEG00000012806	lsm7	97	95.000	Oryzias_melastigma
ENSJJAG00000001936	Lsm7	98	98.020	ENSOGAG00000000144	-	99	98.020	Otolemur_garnettii
ENSJJAG00000001936	Lsm7	98	88.119	ENSOGAG00000024373	-	98	88.119	Otolemur_garnettii
ENSJJAG00000001936	Lsm7	98	98.020	ENSOARG00000014013	LSM7	98	98.020	Ovis_aries
ENSJJAG00000001936	Lsm7	98	98.020	ENSPPAG00000026500	LSM7	98	98.020	Pan_paniscus
ENSJJAG00000001936	Lsm7	98	97.030	ENSPPRG00000008624	LSM7	98	97.030	Panthera_pardus
ENSJJAG00000001936	Lsm7	98	97.030	ENSPTIG00000016252	LSM7	98	97.030	Panthera_tigris_altaica
ENSJJAG00000001936	Lsm7	98	98.020	ENSPTRG00000010233	LSM7	98	98.020	Pan_troglodytes
ENSJJAG00000001936	Lsm7	98	98.020	ENSPANG00000020668	LSM7	98	98.020	Papio_anubis
ENSJJAG00000001936	Lsm7	98	97.030	ENSPKIG00000011325	lsm7	97	97.000	Paramormyrops_kingsleyae
ENSJJAG00000001936	Lsm7	97	98.000	ENSPSIG00000017149	LSM7	88	98.000	Pelodiscus_sinensis
ENSJJAG00000001936	Lsm7	97	95.000	ENSPMGG00000006498	lsm7	97	95.000	Periophthalmus_magnuspinnatus
ENSJJAG00000001936	Lsm7	97	99.000	ENSPCIG00000030454	LSM7	98	99.000	Phascolarctos_cinereus
ENSJJAG00000001936	Lsm7	97	95.000	ENSPFOG00000012467	lsm7	88	95.000	Poecilia_formosa
ENSJJAG00000001936	Lsm7	97	95.000	ENSPLAG00000000252	lsm7	93	95.000	Poecilia_latipinna
ENSJJAG00000001936	Lsm7	99	94.118	ENSPMEG00000000587	lsm7	93	95.000	Poecilia_mexicana
ENSJJAG00000001936	Lsm7	77	75.000	ENSPREG00000016718	lsm7	64	75.000	Poecilia_reticulata
ENSJJAG00000001936	Lsm7	72	95.946	ENSPPYG00000009348	-	51	95.946	Pongo_abelii
ENSJJAG00000001936	Lsm7	98	98.020	ENSPCOG00000017177	LSM7	99	98.020	Propithecus_coquereli
ENSJJAG00000001936	Lsm7	97	94.000	ENSPNYG00000006938	lsm7	97	94.000	Pundamilia_nyererei
ENSJJAG00000001936	Lsm7	97	95.000	ENSPNAG00000010141	lsm7	98	95.000	Pygocentrus_nattereri
ENSJJAG00000001936	Lsm7	98	100.000	ENSRNOG00000019552	Lsm7	98	100.000	Rattus_norvegicus
ENSJJAG00000001936	Lsm7	98	98.020	ENSRBIG00000035978	LSM7	98	98.020	Rhinopithecus_bieti
ENSJJAG00000001936	Lsm7	98	98.020	ENSRROG00000034044	LSM7	98	98.020	Rhinopithecus_roxellana
ENSJJAG00000001936	Lsm7	90	44.554	YNL147W	-	88	44.554	Saccharomyces_cerevisiae
ENSJJAG00000001936	Lsm7	98	98.020	ENSSBOG00000034899	LSM7	98	98.020	Saimiri_boliviensis_boliviensis
ENSJJAG00000001936	Lsm7	97	95.000	ENSSFOG00015006728	lsm7	97	95.000	Scleropages_formosus
ENSJJAG00000001936	Lsm7	98	95.050	ENSSMAG00000004195	lsm7	93	95.050	Scophthalmus_maximus
ENSJJAG00000001936	Lsm7	97	95.000	ENSSDUG00000001863	lsm7	97	95.000	Seriola_dumerili
ENSJJAG00000001936	Lsm7	97	95.000	ENSSLDG00000016339	lsm7	97	95.000	Seriola_lalandi_dorsalis
ENSJJAG00000001936	Lsm7	97	95.000	ENSSPAG00000015221	lsm7	97	95.000	Stegastes_partitus
ENSJJAG00000001936	Lsm7	98	98.020	ENSSSCG00000013463	LSM7	99	98.020	Sus_scrofa
ENSJJAG00000001936	Lsm7	97	97.000	ENSTGUG00000000067	LSM7	99	97.000	Taeniopygia_guttata
ENSJJAG00000001936	Lsm7	97	95.000	ENSTRUG00000022913	lsm7	97	95.000	Takifugu_rubripes
ENSJJAG00000001936	Lsm7	97	95.000	ENSTNIG00000015525	lsm7	97	95.000	Tetraodon_nigroviridis
ENSJJAG00000001936	Lsm7	68	85.714	ENSTBEG00000016602	LSM7	100	85.714	Tupaia_belangeri
ENSJJAG00000001936	Lsm7	98	97.030	ENSUAMG00000000912	LSM7	84	97.030	Ursus_americanus
ENSJJAG00000001936	Lsm7	98	97.030	ENSUMAG00000006556	LSM7	79	97.030	Ursus_maritimus
ENSJJAG00000001936	Lsm7	69	95.775	ENSVVUG00000002640	LSM7	65	95.775	Vulpes_vulpes
ENSJJAG00000001936	Lsm7	97	97.000	ENSXETG00000022166	lsm7	99	97.000	Xenopus_tropicalis
ENSJJAG00000001936	Lsm7	97	96.000	ENSXCOG00000002572	lsm7	98	96.000	Xiphophorus_couchianus
ENSJJAG00000001936	Lsm7	97	96.000	ENSXMAG00000018630	lsm7	97	96.000	Xiphophorus_maculatus