EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000002575 (Gene tree)
Gene ID: 101617759
Gene Symbol: Rbfox1
Alias: A2bp|A2bp1|FOX1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 628415 bases
Position: chrJH725443.1:6111881-6740295
Accession: 101617759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000001831	Fox-1_C	PF12414.8	9.2e-43	1	1
ENSJJAP00000001840	Fox-1_C	PF12414.8	9.3e-43	1	1
ENSJJAP00000001837	Fox-1_C	PF12414.8	1e-40	1	1
ENSJJAP00000001837	RRM_1	PF00076.22	2.6e-18	1	1
ENSJJAP00000001831	RRM_1	PF00076.22	2.6e-18	1	1
ENSJJAP00000001840	RRM_1	PF00076.22	2.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000003246	-	1173	XM_004652243	ENSJJAP00000001840	390 (aa)	XP_004652300	-
ENSJJAT00000003212	-	1164	-	ENSJJAP00000001831	387 (aa)	-	-
ENSJJAT00000003232	-	1227	XM_004652242	ENSJJAP00000001837	408 (aa)	XP_004652299	UPI000333005E

Gene Model

Click here to download ENSJJAG00000002575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000002575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000002575	Rbfox1	91	57.005	ENSJJAG00000014167	Rbfox3	100	60.411
ENSJJAG00000002575	Rbfox1	100	59.901	ENSJJAG00000014885	Rbfox2	100	59.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000002575	Rbfox1	100	94.710	ENSG00000078328	RBFOX1	100	94.710	Homo_sapiens
ENSJJAG00000002575	Rbfox1	100	75.181	ENSAPOG00000003197	rbfox1	100	76.145	Acanthochromis_polyacanthus
ENSJJAG00000002575	Rbfox1	59	89.200	ENSAMEG00000008605	RBFOX1	100	89.200	Ailuropoda_melanoleuca
ENSJJAG00000002575	Rbfox1	69	65.203	ENSACIG00000005478	rbfox1	68	65.657	Amphilophus_citrinellus
ENSJJAG00000002575	Rbfox1	74	66.981	ENSAOCG00000008283	rbfox1	99	68.239	Amphiprion_ocellaris
ENSJJAG00000002575	Rbfox1	95	71.353	ENSAPEG00000010636	rbfox1	100	71.883	Amphiprion_percula
ENSJJAG00000002575	Rbfox1	72	68.608	ENSATEG00000007513	rbfox1	97	68.167	Anabas_testudineus
ENSJJAG00000002575	Rbfox1	98	91.003	ENSAPLG00000013263	RBFOX1	97	91.260	Anas_platyrhynchos
ENSJJAG00000002575	Rbfox1	99	84.461	ENSACAG00000004013	RBFOX1	100	84.461	Anolis_carolinensis
ENSJJAG00000002575	Rbfox1	99	91.624	ENSANAG00000029527	RBFOX1	98	94.615	Aotus_nancymaae
ENSJJAG00000002575	Rbfox1	55	84.685	ENSAMXG00000002431	rbfox1	65	84.375	Astyanax_mexicanus
ENSJJAG00000002575	Rbfox1	99	91.371	ENSBTAG00000007210	RBFOX1	98	94.359	Bos_taurus
ENSJJAG00000002575	Rbfox1	100	94.498	ENSCJAG00000017351	RBFOX1	100	94.498	Callithrix_jacchus
ENSJJAG00000002575	Rbfox1	100	94.976	ENSCAFG00000019082	RBFOX1	100	94.976	Canis_familiaris
ENSJJAG00000002575	Rbfox1	70	92.905	ENSCAFG00020024881	RBFOX1	83	92.905	Canis_lupus_dingo
ENSJJAG00000002575	Rbfox1	99	91.371	ENSCHIG00000023549	RBFOX1	98	94.359	Capra_hircus
ENSJJAG00000002575	Rbfox1	98	92.545	ENSTSYG00000005334	RBFOX1	100	94.602	Carlito_syrichta
ENSJJAG00000002575	Rbfox1	100	94.019	ENSCAPG00000017669	RBFOX1	100	94.330	Cavia_aperea
ENSJJAG00000002575	Rbfox1	100	94.207	ENSCPOG00000011314	RBFOX1	100	94.207	Cavia_porcellus
ENSJJAG00000002575	Rbfox1	100	94.258	ENSCCAG00000023031	RBFOX1	100	94.258	Cebus_capucinus
ENSJJAG00000002575	Rbfox1	100	94.498	ENSCATG00000033816	RBFOX1	100	94.498	Cercocebus_atys
ENSJJAG00000002575	Rbfox1	100	94.258	ENSCLAG00000012761	RBFOX1	100	94.258	Chinchilla_lanigera
ENSJJAG00000002575	Rbfox1	84	91.642	ENSCSAG00000008739	RBFOX1	88	92.749	Chlorocebus_sabaeus
ENSJJAG00000002575	Rbfox1	100	72.967	ENSCHOG00000012843	RBFOX1	100	72.967	Choloepus_hoffmanni
ENSJJAG00000002575	Rbfox1	98	91.237	ENSCPBG00000026626	RBFOX1	98	91.026	Chrysemys_picta_bellii
ENSJJAG00000002575	Rbfox1	100	94.498	ENSCANG00000033125	RBFOX1	100	94.498	Colobus_angolensis_palliatus
ENSJJAG00000002575	Rbfox1	100	94.724	ENSCGRG00001013729	Rbfox1	100	94.724	Cricetulus_griseus_chok1gshd
ENSJJAG00000002575	Rbfox1	100	94.724	ENSCGRG00000003272	Rbfox1	100	94.724	Cricetulus_griseus_crigri
ENSJJAG00000002575	Rbfox1	95	70.781	ENSCSEG00000008840	rbfox1	100	70.781	Cynoglossus_semilaevis
ENSJJAG00000002575	Rbfox1	100	80.151	ENSDARG00000014746	rbfox1	100	83.902	Danio_rerio
ENSJJAG00000002575	Rbfox1	98	94.615	ENSDNOG00000043612	RBFOX1	97	93.035	Dasypus_novemcinctus
ENSJJAG00000002575	Rbfox1	99	92.250	ENSDORG00000010024	Rbfox1	100	91.067	Dipodomys_ordii
ENSJJAG00000002575	Rbfox1	100	76.019	ENSETEG00000003771	RBFOX1	100	76.019	Echinops_telfairi
ENSJJAG00000002575	Rbfox1	98	94.859	ENSEASG00005011599	RBFOX1	98	95.128	Equus_asinus_asinus
ENSJJAG00000002575	Rbfox1	97	94.321	ENSECAG00000012667	RBFOX1	98	94.321	Equus_caballus
ENSJJAG00000002575	Rbfox1	100	52.577	ENSELUG00000013096	rbfox1	100	50.630	Esox_lucius
ENSJJAG00000002575	Rbfox1	98	94.859	ENSFCAG00000025322	RBFOX1	96	88.278	Felis_catus
ENSJJAG00000002575	Rbfox1	81	91.049	ENSFALG00000004027	RBFOX1	100	88.889	Ficedula_albicollis
ENSJJAG00000002575	Rbfox1	100	94.458	ENSFDAG00000007388	RBFOX1	100	94.458	Fukomys_damarensis
ENSJJAG00000002575	Rbfox1	100	89.713	ENSGALG00000034325	RBFOX1	100	89.713	Gallus_gallus
ENSJJAG00000002575	Rbfox1	100	88.995	ENSGAGG00000023681	RBFOX1	100	91.512	Gopherus_agassizii
ENSJJAG00000002575	Rbfox1	100	94.498	ENSGGOG00000016871	-	100	94.498	Gorilla_gorilla
ENSJJAG00000002575	Rbfox1	100	94.458	ENSHGLG00000016944	RBFOX1	100	94.458	Heterocephalus_glaber_female
ENSJJAG00000002575	Rbfox1	100	94.458	ENSHGLG00100003272	RBFOX1	100	94.458	Heterocephalus_glaber_male
ENSJJAG00000002575	Rbfox1	84	69.452	ENSHCOG00000016419	rbfox1	91	69.741	Hippocampus_comes
ENSJJAG00000002575	Rbfox1	95	82.713	ENSIPUG00000015215	rbfox1	100	82.713	Ictalurus_punctatus
ENSJJAG00000002575	Rbfox1	100	93.703	ENSSTOG00000000322	RBFOX1	100	93.703	Ictidomys_tridecemlineatus
ENSJJAG00000002575	Rbfox1	100	71.814	ENSLBEG00000014659	rbfox1	99	72.705	Labrus_bergylta
ENSJJAG00000002575	Rbfox1	98	84.733	ENSLOCG00000006675	rbfox1	99	84.733	Lepisosteus_oculatus
ENSJJAG00000002575	Rbfox1	79	98.701	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSJJAG00000002575	Rbfox1	100	94.498	ENSMFAG00000036447	RBFOX1	100	94.498	Macaca_fascicularis
ENSJJAG00000002575	Rbfox1	100	94.498	ENSMMUG00000003458	RBFOX1	100	94.498	Macaca_mulatta
ENSJJAG00000002575	Rbfox1	100	94.498	ENSMNEG00000032034	RBFOX1	100	94.498	Macaca_nemestrina
ENSJJAG00000002575	Rbfox1	100	94.498	ENSMLEG00000015382	RBFOX1	100	94.498	Mandrillus_leucophaeus
ENSJJAG00000002575	Rbfox1	95	72.959	ENSMAMG00000003142	rbfox1	100	74.235	Mastacembelus_armatus
ENSJJAG00000002575	Rbfox1	70	84.698	ENSMGAG00000008606	RBFOX1	96	83.929	Meleagris_gallopavo
ENSJJAG00000002575	Rbfox1	100	53.885	ENSMAUG00000020570	Rbfox1	99	53.671	Mesocricetus_auratus
ENSJJAG00000002575	Rbfox1	98	87.692	ENSMICG00000034286	RBFOX1	100	86.600	Microcebus_murinus
ENSJJAG00000002575	Rbfox1	100	94.484	ENSMOCG00000020932	Rbfox1	100	94.778	Microtus_ochrogaster
ENSJJAG00000002575	Rbfox1	86	71.554	ENSMMOG00000009716	rbfox1	86	71.940	Mola_mola
ENSJJAG00000002575	Rbfox1	80	91.223	ENSMODG00000005826	RBFOX1	90	91.223	Monodelphis_domestica
ENSJJAG00000002575	Rbfox1	100	74.572	ENSMALG00000003337	rbfox1	100	74.817	Monopterus_albus
ENSJJAG00000002575	Rbfox1	100	94.724	MGP_CAROLIEiJ_G0020427	Rbfox1	100	94.724	Mus_caroli
ENSJJAG00000002575	Rbfox1	100	94.484	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSJJAG00000002575	Rbfox1	100	94.724	MGP_PahariEiJ_G0016135	Rbfox1	100	94.724	Mus_pahari
ENSJJAG00000002575	Rbfox1	100	94.245	MGP_SPRETEiJ_G0021321	Rbfox1	100	94.245	Mus_spretus
ENSJJAG00000002575	Rbfox1	86	90.000	ENSMPUG00000014822	RBFOX1	91	90.000	Mustela_putorius_furo
ENSJJAG00000002575	Rbfox1	79	99.349	ENSMLUG00000015896	RBFOX1	100	99.349	Myotis_lucifugus
ENSJJAG00000002575	Rbfox1	100	94.737	ENSNGAG00000023276	Rbfox1	100	94.845	Nannospalax_galili
ENSJJAG00000002575	Rbfox1	98	59.518	ENSNBRG00000011084	rbfox1	98	58.605	Neolamprologus_brichardi
ENSJJAG00000002575	Rbfox1	100	94.258	ENSNLEG00000010017	-	100	94.258	Nomascus_leucogenys
ENSJJAG00000002575	Rbfox1	100	76.794	ENSMEUG00000012525	RBFOX1	100	76.794	Notamacropus_eugenii
ENSJJAG00000002575	Rbfox1	100	76.316	ENSOPRG00000006199	-	100	75.120	Ochotona_princeps
ENSJJAG00000002575	Rbfox1	100	93.955	ENSODEG00000013166	RBFOX1	100	93.955	Octodon_degus
ENSJJAG00000002575	Rbfox1	84	88.955	ENSOANG00000002379	RBFOX1	88	90.030	Ornithorhynchus_anatinus
ENSJJAG00000002575	Rbfox1	56	88.889	ENSOCUG00000001205	-	100	88.889	Oryctolagus_cuniculus
ENSJJAG00000002575	Rbfox1	100	93.199	ENSOGAG00000025535	RBFOX1	100	93.199	Otolemur_garnettii
ENSJJAG00000002575	Rbfox1	62	82.083	ENSOARG00000005135	RBFOX1	100	81.328	Ovis_aries
ENSJJAG00000002575	Rbfox1	98	94.845	ENSPPAG00000036238	-	100	94.845	Pan_paniscus
ENSJJAG00000002575	Rbfox1	100	94.737	ENSPPRG00000006546	RBFOX1	100	94.737	Panthera_pardus
ENSJJAG00000002575	Rbfox1	100	82.620	ENSPTIG00000021154	RBFOX1	99	82.776	Panthera_tigris_altaica
ENSJJAG00000002575	Rbfox1	100	94.498	ENSPTRG00000007744	RBFOX1	100	94.498	Pan_troglodytes
ENSJJAG00000002575	Rbfox1	100	94.498	ENSPANG00000026500	RBFOX1	100	94.498	Papio_anubis
ENSJJAG00000002575	Rbfox1	100	80.201	ENSPKIG00000009667	-	95	80.707	Paramormyrops_kingsleyae
ENSJJAG00000002575	Rbfox1	73	80.479	ENSPKIG00000019353	rbfox1	86	80.690	Paramormyrops_kingsleyae
ENSJJAG00000002575	Rbfox1	99	90.331	ENSPSIG00000006523	RBFOX1	98	90.331	Pelodiscus_sinensis
ENSJJAG00000002575	Rbfox1	100	94.724	ENSPEMG00000017607	Rbfox1	100	94.724	Peromyscus_maniculatus_bairdii
ENSJJAG00000002575	Rbfox1	75	92.414	ENSPCIG00000026887	RBFOX1	100	92.414	Phascolarctos_cinereus
ENSJJAG00000002575	Rbfox1	86	90.278	ENSPPYG00000007079	-	91	90.278	Pongo_abelii
ENSJJAG00000002575	Rbfox1	90	87.302	ENSPCAG00000002630	RBFOX1	100	87.302	Procavia_capensis
ENSJJAG00000002575	Rbfox1	100	95.215	ENSPCOG00000025687	RBFOX1	100	95.215	Propithecus_coquereli
ENSJJAG00000002575	Rbfox1	100	90.191	ENSPVAG00000013467	RBFOX1	100	90.191	Pteropus_vampyrus
ENSJJAG00000002575	Rbfox1	95	79.293	ENSPNAG00000023109	rbfox1	100	79.293	Pygocentrus_nattereri
ENSJJAG00000002575	Rbfox1	100	92.326	ENSRNOG00000002827	Rbfox1	100	92.326	Rattus_norvegicus
ENSJJAG00000002575	Rbfox1	98	94.845	ENSRBIG00000044478	RBFOX1	100	94.845	Rhinopithecus_bieti
ENSJJAG00000002575	Rbfox1	100	94.498	ENSRROG00000044411	RBFOX1	100	94.498	Rhinopithecus_roxellana
ENSJJAG00000002575	Rbfox1	99	93.639	ENSSBOG00000033726	RBFOX1	98	93.639	Saimiri_boliviensis_boliviensis
ENSJJAG00000002575	Rbfox1	100	89.169	ENSSHAG00000009257	RBFOX1	100	89.169	Sarcophilus_harrisii
ENSJJAG00000002575	Rbfox1	88	70.787	ENSSFOG00015009955	-	87	68.817	Scleropages_formosus
ENSJJAG00000002575	Rbfox1	98	66.158	ENSSFOG00015023675	rbfox1	93	88.889	Scleropages_formosus
ENSJJAG00000002575	Rbfox1	98	75.123	ENSSMAG00000015505	rbfox1	96	72.749	Scophthalmus_maximus
ENSJJAG00000002575	Rbfox1	98	74.615	ENSSDUG00000016413	rbfox1	99	74.169	Seriola_dumerili
ENSJJAG00000002575	Rbfox1	84	72.189	ENSSLDG00000009353	rbfox1	97	70.833	Seriola_lalandi_dorsalis
ENSJJAG00000002575	Rbfox1	84	79.118	ENSSPUG00000009732	RBFOX1	87	79.179	Sphenodon_punctatus
ENSJJAG00000002575	Rbfox1	98	74.631	ENSSPAG00000009723	rbfox1	100	75.616	Stegastes_partitus
ENSJJAG00000002575	Rbfox1	97	93.827	ENSSSCG00000007917	RBFOX1	98	93.827	Sus_scrofa
ENSJJAG00000002575	Rbfox1	98	91.260	ENSTGUG00000004562	RBFOX1	100	91.517	Taeniopygia_guttata
ENSJJAG00000002575	Rbfox1	98	74.877	ENSTRUG00000020940	rbfox1	99	75.369	Takifugu_rubripes
ENSJJAG00000002575	Rbfox1	69	57.643	ENSTNIG00000002567	rbfox1	100	59.236	Tetraodon_nigroviridis
ENSJJAG00000002575	Rbfox1	83	86.207	ENSTBEG00000009169	-	81	86.207	Tupaia_belangeri
ENSJJAG00000002575	Rbfox1	100	94.019	ENSTTRG00000005700	RBFOX1	100	94.019	Tursiops_truncatus
ENSJJAG00000002575	Rbfox1	100	87.657	ENSUAMG00000024633	RBFOX1	100	88.665	Ursus_americanus
ENSJJAG00000002575	Rbfox1	100	80.101	ENSUMAG00000003579	RBFOX1	100	80.101	Ursus_maritimus
ENSJJAG00000002575	Rbfox1	83	99.026	ENSVPAG00000001284	RBFOX1	81	99.026	Vicugna_pacos
ENSJJAG00000002575	Rbfox1	98	94.859	ENSVVUG00000017311	RBFOX1	96	88.278	Vulpes_vulpes