EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000003145 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 552 bases
Position: chrJH725502.1:4472932-4473483
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002014	RNA_pol_Rpb5_N	PF03871.14	2.9e-34	1	1
ENSJJAP00000002014	RNA_pol_Rpb5_C	PF01191.19	1.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000003663	-	528	-	ENSJJAP00000002014	175 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000003145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000003145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000003145	-	72	68.874	ENSJJAG00000015812	-	100	68.874
ENSJJAG00000003145	-	100	80.476	ENSJJAG00000016595	-	100	80.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000003145	-	100	90.710	ENSG00000099817	POLR2E	99	90.710	Homo_sapiens
ENSJJAG00000003145	-	100	89.071	ENSAPOG00000002935	polr2eb	100	89.071	Acanthochromis_polyacanthus
ENSJJAG00000003145	-	100	80.000	ENSAMEG00000003159	POLR2E	100	80.000	Ailuropoda_melanoleuca
ENSJJAG00000003145	-	100	89.617	ENSACIG00000024371	polr2eb	100	89.617	Amphilophus_citrinellus
ENSJJAG00000003145	-	100	89.071	ENSAOCG00000018166	polr2eb	100	89.071	Amphiprion_ocellaris
ENSJJAG00000003145	-	100	77.619	ENSAPEG00000009000	polr2eb	100	77.619	Amphiprion_percula
ENSJJAG00000003145	-	100	89.071	ENSATEG00000023760	polr2eb	100	89.071	Anabas_testudineus
ENSJJAG00000003145	-	100	91.257	ENSANAG00000038488	POLR2E	99	91.257	Aotus_nancymaae
ENSJJAG00000003145	-	100	89.617	ENSACLG00000005254	polr2eb	100	89.617	Astatotilapia_calliptera
ENSJJAG00000003145	-	100	78.095	ENSAMXG00000018915	POLR2E	100	78.095	Astyanax_mexicanus
ENSJJAG00000003145	-	100	80.000	ENSBTAG00000020776	POLR2E	100	80.000	Bos_taurus
ENSJJAG00000003145	-	99	63.942	WBGene00019246	rpb-5	99	63.942	Caenorhabditis_elegans
ENSJJAG00000003145	-	60	67.857	ENSCJAG00000007666	-	77	67.857	Callithrix_jacchus
ENSJJAG00000003145	-	100	76.667	ENSCAFG00000019546	POLR2E	100	76.667	Canis_familiaris
ENSJJAG00000003145	-	100	80.000	ENSCAFG00020017111	POLR2E	100	80.000	Canis_lupus_dingo
ENSJJAG00000003145	-	100	80.000	ENSCHIG00000014151	POLR2E	100	80.000	Capra_hircus
ENSJJAG00000003145	-	100	71.038	ENSTSYG00000026377	POLR2E	100	71.038	Carlito_syrichta
ENSJJAG00000003145	-	90	78.646	ENSCAPG00000010843	POLR2E	93	78.646	Cavia_aperea
ENSJJAG00000003145	-	100	80.000	ENSCPOG00000001542	POLR2E	100	80.000	Cavia_porcellus
ENSJJAG00000003145	-	100	91.257	ENSCCAG00000025658	POLR2E	99	91.257	Cebus_capucinus
ENSJJAG00000003145	-	100	91.257	ENSCATG00000008926	POLR2E	99	91.257	Cercocebus_atys
ENSJJAG00000003145	-	100	79.524	ENSCLAG00000014874	-	100	79.524	Chinchilla_lanigera
ENSJJAG00000003145	-	97	58.537	ENSCLAG00000009238	-	100	58.537	Chinchilla_lanigera
ENSJJAG00000003145	-	100	80.000	ENSCSAG00000012336	POLR2E	100	80.000	Chlorocebus_sabaeus
ENSJJAG00000003145	-	100	79.524	ENSCPBG00000009702	POLR2E	100	79.524	Chrysemys_picta_bellii
ENSJJAG00000003145	-	100	70.000	ENSCING00000024933	-	99	70.000	Ciona_intestinalis
ENSJJAG00000003145	-	100	91.257	ENSCANG00000025560	POLR2E	99	91.257	Colobus_angolensis_palliatus
ENSJJAG00000003145	-	100	80.476	ENSCGRG00001022927	Polr2e	100	80.476	Cricetulus_griseus_chok1gshd
ENSJJAG00000003145	-	100	74.419	ENSCGRG00000016441	Polr2e	100	74.419	Cricetulus_griseus_crigri
ENSJJAG00000003145	-	100	87.978	ENSCSEG00000007107	polr2eb	100	87.978	Cynoglossus_semilaevis
ENSJJAG00000003145	-	100	89.071	ENSCVAG00000019940	polr2eb	100	89.071	Cyprinodon_variegatus
ENSJJAG00000003145	-	100	76.667	ENSDARG00000026183	polr2eb	100	76.667	Danio_rerio
ENSJJAG00000003145	-	89	78.421	ENSDNOG00000044994	POLR2E	84	78.421	Dasypus_novemcinctus
ENSJJAG00000003145	-	100	80.000	ENSDORG00000001154	Polr2e	100	80.000	Dipodomys_ordii
ENSJJAG00000003145	-	99	68.421	FBgn0033571	Rpb5	99	68.421	Drosophila_melanogaster
ENSJJAG00000003145	-	70	68.153	ENSEBUG00000010159	-	76	68.153	Eptatretus_burgeri
ENSJJAG00000003145	-	63	66.897	ENSEASG00005021615	POLR2E	61	66.897	Equus_asinus_asinus
ENSJJAG00000003145	-	100	91.803	ENSECAG00000011124	POLR2E	100	91.803	Equus_caballus
ENSJJAG00000003145	-	100	86.339	ENSELUG00000020646	polr2e	100	86.339	Esox_lucius
ENSJJAG00000003145	-	100	87.432	ENSELUG00000005815	POLR2E	100	87.432	Esox_lucius
ENSJJAG00000003145	-	99	91.758	ENSFCAG00000007318	POLR2E	100	91.758	Felis_catus
ENSJJAG00000003145	-	90	78.125	ENSFALG00000013986	POLR2E	99	78.125	Ficedula_albicollis
ENSJJAG00000003145	-	100	80.000	ENSFDAG00000014539	POLR2E	100	80.000	Fukomys_damarensis
ENSJJAG00000003145	-	100	89.071	ENSFHEG00000022398	polr2eb	100	89.071	Fundulus_heteroclitus
ENSJJAG00000003145	-	100	76.190	ENSGMOG00000007615	polr2eb	100	76.190	Gadus_morhua
ENSJJAG00000003145	-	100	79.524	ENSGALG00000002591	POLR2E	100	79.524	Gallus_gallus
ENSJJAG00000003145	-	100	89.617	ENSGAFG00000005087	polr2eb	100	89.617	Gambusia_affinis
ENSJJAG00000003145	-	100	76.190	ENSGACG00000013247	polr2eb	100	76.190	Gasterosteus_aculeatus
ENSJJAG00000003145	-	100	79.524	ENSGAGG00000008356	POLR2E	100	79.524	Gopherus_agassizii
ENSJJAG00000003145	-	100	91.257	ENSGGOG00000011267	POLR2E	99	91.257	Gorilla_gorilla
ENSJJAG00000003145	-	61	80.870	ENSHBUG00000011099	polr2eb	100	80.870	Haplochromis_burtoni
ENSJJAG00000003145	-	100	79.048	ENSHGLG00000013330	POLR2E	100	79.048	Heterocephalus_glaber_female
ENSJJAG00000003145	-	100	79.048	ENSHGLG00100011014	POLR2E	100	79.048	Heterocephalus_glaber_male
ENSJJAG00000003145	-	100	87.432	ENSHCOG00000000906	polr2eb	100	87.432	Hippocampus_comes
ENSJJAG00000003145	-	100	77.619	ENSIPUG00000019801	polr2e	100	77.619	Ictalurus_punctatus
ENSJJAG00000003145	-	100	80.000	ENSSTOG00000002853	POLR2E	100	80.000	Ictidomys_tridecemlineatus
ENSJJAG00000003145	-	100	77.619	ENSKMAG00000005954	polr2eb	100	77.619	Kryptolebias_marmoratus
ENSJJAG00000003145	-	100	89.071	ENSLBEG00000024802	polr2eb	100	89.071	Labrus_bergylta
ENSJJAG00000003145	-	100	77.143	ENSLACG00000013686	POLR2E	100	77.143	Latimeria_chalumnae
ENSJJAG00000003145	-	73	74.074	ENSLOCG00000004599	POLR2E	100	74.074	Lepisosteus_oculatus
ENSJJAG00000003145	-	100	61.792	ENSLAFG00000025587	POLR2E	100	61.792	Loxodonta_africana
ENSJJAG00000003145	-	100	91.257	ENSMFAG00000002884	POLR2E	99	91.257	Macaca_fascicularis
ENSJJAG00000003145	-	100	91.257	ENSMMUG00000013927	POLR2E	99	91.257	Macaca_mulatta
ENSJJAG00000003145	-	100	91.257	ENSMNEG00000034046	-	99	91.257	Macaca_nemestrina
ENSJJAG00000003145	-	100	49.289	ENSMNEG00000033452	-	100	49.289	Macaca_nemestrina
ENSJJAG00000003145	-	90	79.747	ENSMLEG00000012405	POLR2E	93	79.747	Mandrillus_leucophaeus
ENSJJAG00000003145	-	100	89.071	ENSMAMG00000018703	polr2eb	100	89.071	Mastacembelus_armatus
ENSJJAG00000003145	-	100	89.617	ENSMZEG00005010796	polr2eb	100	89.617	Maylandia_zebra
ENSJJAG00000003145	-	100	78.199	ENSMGAG00000003769	POLR2E	100	78.199	Meleagris_gallopavo
ENSJJAG00000003145	-	90	78.756	ENSMAUG00000010125	-	100	79.058	Mesocricetus_auratus
ENSJJAG00000003145	-	100	51.485	ENSMAUG00000011003	-	100	51.485	Mesocricetus_auratus
ENSJJAG00000003145	-	100	91.803	ENSMICG00000013063	POLR2E	99	91.803	Microcebus_murinus
ENSJJAG00000003145	-	100	80.476	ENSMOCG00000013414	Polr2e	100	80.476	Microtus_ochrogaster
ENSJJAG00000003145	-	89	67.016	ENSMMOG00000001167	polr2eb	88	67.016	Mola_mola
ENSJJAG00000003145	-	100	86.885	ENSMMOG00000001161	polr2eb	100	86.885	Mola_mola
ENSJJAG00000003145	-	100	79.524	ENSMODG00000005494	POLR2E	100	79.524	Monodelphis_domestica
ENSJJAG00000003145	-	100	78.095	ENSMALG00000021888	polr2eb	100	78.095	Monopterus_albus
ENSJJAG00000003145	-	100	80.476	MGP_CAROLIEiJ_G0015561	Polr2e	100	80.476	Mus_caroli
ENSJJAG00000003145	-	100	80.476	ENSMUSG00000004667	Polr2e	100	80.476	Mus_musculus
ENSJJAG00000003145	-	100	80.476	MGP_PahariEiJ_G0030974	Polr2e	100	80.476	Mus_pahari
ENSJJAG00000003145	-	100	80.476	MGP_SPRETEiJ_G0016379	Polr2e	100	80.476	Mus_spretus
ENSJJAG00000003145	-	100	79.524	ENSMPUG00000008953	POLR2E	100	79.524	Mustela_putorius_furo
ENSJJAG00000003145	-	66	77.953	ENSMLUG00000006376	-	78	77.953	Myotis_lucifugus
ENSJJAG00000003145	-	100	80.000	ENSMLUG00000013193	POLR2E	100	80.000	Myotis_lucifugus
ENSJJAG00000003145	-	100	80.476	ENSNGAG00000001147	Polr2e	100	80.476	Nannospalax_galili
ENSJJAG00000003145	-	82	64.375	ENSNGAG00000017344	-	96	64.375	Nannospalax_galili
ENSJJAG00000003145	-	100	89.617	ENSNBRG00000022772	polr2eb	100	89.617	Neolamprologus_brichardi
ENSJJAG00000003145	-	100	68.342	ENSNLEG00000031364	-	100	68.342	Nomascus_leucogenys
ENSJJAG00000003145	-	100	88.043	ENSNLEG00000001207	-	100	88.043	Nomascus_leucogenys
ENSJJAG00000003145	-	100	73.113	ENSOPRG00000008331	POLR2E	100	73.113	Ochotona_princeps
ENSJJAG00000003145	-	86	73.184	ENSODEG00000007985	-	100	73.184	Octodon_degus
ENSJJAG00000003145	-	100	67.708	ENSODEG00000011490	-	100	67.708	Octodon_degus
ENSJJAG00000003145	-	100	80.000	ENSODEG00000013230	-	100	80.000	Octodon_degus
ENSJJAG00000003145	-	100	77.619	ENSONIG00000002519	polr2eb	100	77.619	Oreochromis_niloticus
ENSJJAG00000003145	-	100	89.617	ENSORLG00000015346	polr2eb	100	89.617	Oryzias_latipes
ENSJJAG00000003145	-	100	89.617	ENSORLG00020020700	polr2e	100	89.617	Oryzias_latipes_hni
ENSJJAG00000003145	-	100	89.617	ENSORLG00015016842	polr2e	100	89.617	Oryzias_latipes_hsok
ENSJJAG00000003145	-	100	77.619	ENSOMEG00000002709	polr2eb	100	77.619	Oryzias_melastigma
ENSJJAG00000003145	-	100	80.000	ENSOGAG00000012311	POLR2E	100	80.000	Otolemur_garnettii
ENSJJAG00000003145	-	100	80.000	ENSOARG00000010994	POLR2E	100	80.000	Ovis_aries
ENSJJAG00000003145	-	89	90.854	ENSPPAG00000003145	POLR2E	99	90.854	Pan_paniscus
ENSJJAG00000003145	-	99	91.758	ENSPPRG00000000777	POLR2E	100	91.758	Panthera_pardus
ENSJJAG00000003145	-	90	83.030	ENSPTIG00000012237	POLR2E	98	83.030	Panthera_tigris_altaica
ENSJJAG00000003145	-	100	91.257	ENSPTRG00000010183	POLR2E	99	91.257	Pan_troglodytes
ENSJJAG00000003145	-	100	91.257	ENSPANG00000018011	POLR2E	99	91.257	Papio_anubis
ENSJJAG00000003145	-	100	87.978	ENSPKIG00000009607	POLR2E	100	87.978	Paramormyrops_kingsleyae
ENSJJAG00000003145	-	100	87.978	ENSPKIG00000024123	POLR2E	100	87.978	Paramormyrops_kingsleyae
ENSJJAG00000003145	-	97	75.122	ENSPSIG00000002870	POLR2E	99	75.122	Pelodiscus_sinensis
ENSJJAG00000003145	-	100	89.071	ENSPMGG00000014354	polr2eb	100	89.071	Periophthalmus_magnuspinnatus
ENSJJAG00000003145	-	100	80.476	ENSPEMG00000023261	Polr2e	100	80.476	Peromyscus_maniculatus_bairdii
ENSJJAG00000003145	-	88	77.778	ENSPCIG00000007312	POLR2E	75	77.778	Phascolarctos_cinereus
ENSJJAG00000003145	-	100	78.095	ENSPFOG00000005734	polr2eb	100	78.095	Poecilia_formosa
ENSJJAG00000003145	-	100	89.617	ENSPLAG00000014496	polr2eb	100	89.617	Poecilia_latipinna
ENSJJAG00000003145	-	100	89.617	ENSPMEG00000008053	polr2eb	100	89.617	Poecilia_mexicana
ENSJJAG00000003145	-	100	89.617	ENSPREG00000006489	polr2eb	100	89.617	Poecilia_reticulata
ENSJJAG00000003145	-	100	72.512	ENSPPYG00000009305	POLR2E	100	72.512	Pongo_abelii
ENSJJAG00000003145	-	100	91.257	ENSPCOG00000014491	POLR2E	98	91.257	Propithecus_coquereli
ENSJJAG00000003145	-	74	95.238	ENSPVAG00000007718	-	55	89.655	Pteropus_vampyrus
ENSJJAG00000003145	-	89	76.316	ENSPNYG00000019797	polr2eb	96	76.316	Pundamilia_nyererei
ENSJJAG00000003145	-	100	89.071	ENSPNAG00000026263	POLR2E	100	89.071	Pygocentrus_nattereri
ENSJJAG00000003145	-	100	80.476	ENSRNOG00000013545	Polr2e	100	80.476	Rattus_norvegicus
ENSJJAG00000003145	-	100	56.398	ENSRBIG00000027259	-	100	56.398	Rhinopithecus_bieti
ENSJJAG00000003145	-	100	91.257	ENSRBIG00000028726	-	99	91.257	Rhinopithecus_bieti
ENSJJAG00000003145	-	100	91.257	ENSRROG00000043763	POLR2E	99	91.257	Rhinopithecus_roxellana
ENSJJAG00000003145	-	98	38.426	YBR154C	RPB5	98	38.426	Saccharomyces_cerevisiae
ENSJJAG00000003145	-	100	91.257	ENSSBOG00000027241	POLR2E	99	91.257	Saimiri_boliviensis_boliviensis
ENSJJAG00000003145	-	100	79.524	ENSSHAG00000010690	POLR2E	100	79.524	Sarcophilus_harrisii
ENSJJAG00000003145	-	100	89.071	ENSSFOG00015006073	polr2e	100	89.071	Scleropages_formosus
ENSJJAG00000003145	-	100	80.328	ENSSMAG00000012782	polr2eb	100	80.328	Scophthalmus_maximus
ENSJJAG00000003145	-	100	89.071	ENSSDUG00000003352	polr2eb	100	89.071	Seriola_dumerili
ENSJJAG00000003145	-	100	89.071	ENSSLDG00000004965	polr2eb	100	89.071	Seriola_lalandi_dorsalis
ENSJJAG00000003145	-	100	78.095	ENSSPUG00000006114	POLR2E	100	78.095	Sphenodon_punctatus
ENSJJAG00000003145	-	100	89.071	ENSSPAG00000017556	polr2eb	100	89.071	Stegastes_partitus
ENSJJAG00000003145	-	100	80.000	ENSSSCG00000021472	POLR2E	100	80.000	Sus_scrofa
ENSJJAG00000003145	-	74	78.261	ENSTGUG00000000922	POLR2E	96	78.261	Taeniopygia_guttata
ENSJJAG00000003145	-	100	89.071	ENSTRUG00000018238	polr2eb	100	89.071	Takifugu_rubripes
ENSJJAG00000003145	-	100	77.619	ENSTNIG00000013187	polr2eb	100	77.619	Tetraodon_nigroviridis
ENSJJAG00000003145	-	100	79.524	ENSTTRG00000001484	POLR2E	100	79.524	Tursiops_truncatus
ENSJJAG00000003145	-	100	91.257	ENSUAMG00000009166	POLR2E	100	91.257	Ursus_americanus
ENSJJAG00000003145	-	100	80.000	ENSVVUG00000022818	POLR2E	54	80.000	Vulpes_vulpes
ENSJJAG00000003145	-	100	78.571	ENSXETG00000003291	polr2e	100	78.571	Xenopus_tropicalis
ENSJJAG00000003145	-	100	89.617	ENSXCOG00000009197	polr2eb	100	89.617	Xiphophorus_couchianus
ENSJJAG00000003145	-	100	89.617	ENSXMAG00000026495	polr2eb	100	89.617	Xiphophorus_maculatus