EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000003168 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 1335 bases
Position: chrJH725528.1:3057879-3059213
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002050	RRM_1	PF00076.22	1.4e-15	1	2
ENSJJAP00000002050	RRM_1	PF00076.22	1.4e-15	2	2
ENSJJAP00000002043	RRM_1	PF00076.22	6.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000003763	-	390	-	ENSJJAP00000002043	129 (aa)	-	-
ENSJJAT00000003782	-	417	-	ENSJJAP00000002050	138 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000003168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000003168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000003168	-	95	60.839	ENSJJAG00000014755	-	91	61.538
ENSJJAG00000003168	-	99	81.579	ENSJJAG00000011978	-	94	81.579
ENSJJAG00000003168	-	92	73.881	ENSJJAG00000020814	Rbm14	93	75.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000003168	-	98	72.340	ENSG00000173933	RBM4	93	75.188	Homo_sapiens
ENSJJAG00000003168	-	64	32.323	ENSG00000248643	RBM14-RBM4	83	32.323	Homo_sapiens
ENSJJAG00000003168	-	95	73.188	ENSG00000173914	RBM4B	92	77.344	Homo_sapiens
ENSJJAG00000003168	-	92	74.627	ENSANAG00000023478	RBM4B	92	77.344	Aotus_nancymaae
ENSJJAG00000003168	-	91	73.684	ENSANAG00000033986	-	82	72.794	Aotus_nancymaae
ENSJJAG00000003168	-	92	74.627	ENSBTAG00000000423	RBM4B	59	76.923	Bos_taurus
ENSJJAG00000003168	-	92	74.627	ENSCJAG00000013666	RBM4B	92	77.344	Callithrix_jacchus
ENSJJAG00000003168	-	92	74.627	ENSCAFG00020015519	RBM4B	72	76.923	Canis_lupus_dingo
ENSJJAG00000003168	-	74	68.182	ENSTSYG00000036168	-	89	68.182	Carlito_syrichta
ENSJJAG00000003168	-	92	74.627	ENSCAPG00000016600	RBM4	93	75.940	Cavia_aperea
ENSJJAG00000003168	-	92	74.627	ENSCPOG00000013194	RBM4	93	75.940	Cavia_porcellus
ENSJJAG00000003168	-	88	73.643	ENSCCAG00000007508	-	93	72.932	Cebus_capucinus
ENSJJAG00000003168	-	88	55.039	ENSCCAG00000023319	-	61	55.039	Cebus_capucinus
ENSJJAG00000003168	-	92	74.627	ENSCCAG00000016501	RBM4B	92	77.344	Cebus_capucinus
ENSJJAG00000003168	-	92	74.627	ENSCATG00000035353	RBM4B	92	77.344	Cercocebus_atys
ENSJJAG00000003168	-	92	74.627	ENSCLAG00000014756	RBM4	93	75.940	Chinchilla_lanigera
ENSJJAG00000003168	-	92	72.388	ENSCPBG00000023800	-	72	73.684	Chrysemys_picta_bellii
ENSJJAG00000003168	-	97	73.571	ENSCANG00000021868	RBM4B	92	77.344	Colobus_angolensis_palliatus
ENSJJAG00000003168	-	92	74.627	ENSCGRG00001016609	-	93	75.940	Cricetulus_griseus_chok1gshd
ENSJJAG00000003168	-	92	74.627	ENSCGRG00000010183	-	93	75.940	Cricetulus_griseus_crigri
ENSJJAG00000003168	-	92	73.134	ENSDORG00000004538	-	93	74.436	Dipodomys_ordii
ENSJJAG00000003168	-	92	73.881	ENSFCAG00000029651	RBM4	93	75.188	Felis_catus
ENSJJAG00000003168	-	98	72.340	ENSFCAG00000007394	RBM4B	92	77.344	Felis_catus
ENSJJAG00000003168	-	93	68.148	ENSFDAG00000013661	-	97	69.697	Fukomys_damarensis
ENSJJAG00000003168	-	92	74.627	ENSFDAG00000005447	RBM4	93	75.940	Fukomys_damarensis
ENSJJAG00000003168	-	91	73.485	ENSGALG00000040489	-	84	73.485	Gallus_gallus
ENSJJAG00000003168	-	88	68.644	ENSGGOG00000043023	-	92	68.067	Gorilla_gorilla
ENSJJAG00000003168	-	95	72.464	ENSGGOG00000011698	RBM4B	92	77.344	Gorilla_gorilla
ENSJJAG00000003168	-	92	74.627	ENSHGLG00000009991	RBM4	93	75.940	Heterocephalus_glaber_female
ENSJJAG00000003168	-	92	74.627	ENSHGLG00100003854	RBM4	93	75.940	Heterocephalus_glaber_male
ENSJJAG00000003168	-	92	73.881	ENSSTOG00000022811	RBM4	93	75.188	Ictidomys_tridecemlineatus
ENSJJAG00000003168	-	92	74.627	ENSLAFG00000002285	RBM4B	56	76.336	Loxodonta_africana
ENSJJAG00000003168	-	92	74.627	ENSMFAG00000033927	RBM4B	92	75.940	Macaca_fascicularis
ENSJJAG00000003168	-	92	74.627	ENSMNEG00000043371	RBM4B	92	77.344	Macaca_nemestrina
ENSJJAG00000003168	-	92	74.627	ENSMLEG00000028563	RBM4B	92	77.344	Mandrillus_leucophaeus
ENSJJAG00000003168	-	88	74.419	ENSMICG00000047975	-	88	75.781	Microcebus_murinus
ENSJJAG00000003168	-	88	71.318	ENSMICG00000003817	-	93	70.677	Microcebus_murinus
ENSJJAG00000003168	-	99	72.028	ENSMICG00000003820	RBM4B	92	77.344	Microcebus_murinus
ENSJJAG00000003168	-	64	32.323	MGP_CAROLIEiJ_G0022514	-	83	32.323	Mus_caroli
ENSJJAG00000003168	-	92	74.627	MGP_CAROLIEiJ_G0022516	-	93	75.940	Mus_caroli
ENSJJAG00000003168	-	92	74.627	ENSMUSG00000094936	Rbm4	93	75.940	Mus_musculus
ENSJJAG00000003168	-	92	77.465	ENSMUSG00000033760	Rbm4b	93	77.465	Mus_musculus
ENSJJAG00000003168	-	92	74.627	ENSMUSG00000096370	Gm21992	54	76.336	Mus_musculus
ENSJJAG00000003168	-	92	74.627	MGP_PahariEiJ_G0014013	-	93	75.940	Mus_pahari
ENSJJAG00000003168	-	92	74.627	MGP_PahariEiJ_G0014011	-	83	32.323	Mus_pahari
ENSJJAG00000003168	-	92	43.697	MGP_SPRETEiJ_G0023428	-	83	32.323	Mus_spretus
ENSJJAG00000003168	-	98	71.831	ENSNLEG00000035021	RBM4	93	75.188	Nomascus_leucogenys
ENSJJAG00000003168	-	95	72.464	ENSNLEG00000006213	RBM4B	92	77.344	Nomascus_leucogenys
ENSJJAG00000003168	-	88	74.419	ENSODEG00000020039	-	93	73.684	Octodon_degus
ENSJJAG00000003168	-	88	74.419	ENSODEG00000019143	-	93	73.684	Octodon_degus
ENSJJAG00000003168	-	88	76.991	ENSODEG00000006635	-	92	75.424	Octodon_degus
ENSJJAG00000003168	-	95	72.464	ENSPPAG00000015125	RBM4B	92	77.344	Pan_paniscus
ENSJJAG00000003168	-	92	73.881	ENSPPRG00000003533	RBM4	93	75.188	Panthera_pardus
ENSJJAG00000003168	-	98	72.340	ENSPPRG00000003388	RBM4B	92	77.344	Panthera_pardus
ENSJJAG00000003168	-	98	72.340	ENSPTIG00000015426	RBM4B	92	77.344	Panthera_tigris_altaica
ENSJJAG00000003168	-	92	74.627	ENSPTIG00000016180	RBM4	93	75.940	Panthera_tigris_altaica
ENSJJAG00000003168	-	95	72.464	ENSPTRG00000003935	RBM4B	92	77.344	Pan_troglodytes
ENSJJAG00000003168	-	92	74.627	ENSPANG00000020672	RBM4B	92	77.344	Papio_anubis
ENSJJAG00000003168	-	92	74.627	ENSPCOG00000027885	RBM4B	92	77.344	Propithecus_coquereli
ENSJJAG00000003168	-	92	74.627	ENSRNOG00000050741	Rbm4	93	75.940	Rattus_norvegicus
ENSJJAG00000003168	-	97	73.571	ENSRBIG00000019394	RBM4B	92	77.344	Rhinopithecus_bieti
ENSJJAG00000003168	-	98	71.127	ENSRROG00000032796	-	82	76.744	Rhinopithecus_roxellana
ENSJJAG00000003168	-	97	73.571	ENSRROG00000032850	RBM4B	92	77.344	Rhinopithecus_roxellana
ENSJJAG00000003168	-	92	74.627	ENSSBOG00000034474	RBM4B	92	77.344	Saimiri_boliviensis_boliviensis
ENSJJAG00000003168	-	92	73.881	ENSUAMG00000014882	RBM4	93	75.188	Ursus_americanus
ENSJJAG00000003168	-	92	73.881	ENSUMAG00000011738	-	93	75.188	Ursus_maritimus
ENSJJAG00000003168	-	88	68.750	ENSVVUG00000011717	-	88	68.462	Vulpes_vulpes