EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000003323 (Gene tree)
Gene ID: 101612016
Gene Symbol: -
Alias: -
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 29477 bases
Position: chrJH725438.1:5697196-5726672
Accession: 101612016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002096	zf-U11-48K	PF05253.12	7e-20	1	2
ENSJJAP00000002096	zf-U11-48K	PF05253.12	7e-20	2	2
ENSJJAP00000002084	zf-U11-48K	PF05253.12	7.8e-20	1	2
ENSJJAP00000002084	zf-U11-48K	PF05253.12	7.8e-20	2	2
ENSJJAP00000002091	zf-U11-48K	PF05253.12	1e-19	1	2
ENSJJAP00000002091	zf-U11-48K	PF05253.12	1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000003917	-	489	-	ENSJJAP00000002096	162 (aa)	-	-
ENSJJAT00000003889	-	627	XM_004649930	ENSJJAP00000002084	167 (aa)	XP_004649987	UPI00033334FF
ENSJJAT00000003908	-	546	-	ENSJJAP00000002091	181 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000003323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000003323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000003323	-	100	93.413	ENSJJAG00000017442	-	100	93.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000003323	-	100	89.222	ENSG00000170627	GTSF1	100	89.222	Homo_sapiens
ENSJJAG00000003323	-	91	47.297	ENSAPOG00000022724	-	95	47.297	Acanthochromis_polyacanthus
ENSJJAG00000003323	-	98	93.038	ENSAMEG00000000939	GTSF1	96	92.593	Ailuropoda_melanoleuca
ENSJJAG00000003323	-	91	45.270	ENSAOCG00000022214	-	72	43.590	Amphiprion_ocellaris
ENSJJAG00000003323	-	80	60.305	ENSAPLG00000004814	GTSF1	96	60.305	Anas_platyrhynchos
ENSJJAG00000003323	-	98	63.924	ENSACAG00000014260	-	96	63.030	Anolis_carolinensis
ENSJJAG00000003323	-	75	50.413	ENSACAG00000029590	-	98	50.413	Anolis_carolinensis
ENSJJAG00000003323	-	100	87.425	ENSANAG00000024529	GTSF1	100	87.425	Aotus_nancymaae
ENSJJAG00000003323	-	100	90.419	ENSBTAG00000018085	GTSF1	100	90.419	Bos_taurus
ENSJJAG00000003323	-	100	81.437	ENSCJAG00000039915	-	89	80.952	Callithrix_jacchus
ENSJJAG00000003323	-	100	86.826	ENSCJAG00000018968	-	100	86.826	Callithrix_jacchus
ENSJJAG00000003323	-	100	92.216	ENSCAFG00000006465	-	100	92.216	Canis_familiaris
ENSJJAG00000003323	-	100	92.216	ENSCAFG00020020373	-	94	92.073	Canis_lupus_dingo
ENSJJAG00000003323	-	98	91.139	ENSCHIG00000012215	-	95	90.184	Capra_hircus
ENSJJAG00000003323	-	100	71.856	ENSTSYG00000035266	-	100	71.856	Carlito_syrichta
ENSJJAG00000003323	-	99	89.759	ENSTSYG00000004679	-	100	89.759	Carlito_syrichta
ENSJJAG00000003323	-	100	92.216	ENSCPOG00000008743	GTSF1	100	92.216	Cavia_porcellus
ENSJJAG00000003323	-	97	64.968	ENSCCAG00000032808	GTSF1	100	65.217	Cebus_capucinus
ENSJJAG00000003323	-	100	89.222	ENSCATG00000036328	GTSF1	100	89.222	Cercocebus_atys
ENSJJAG00000003323	-	100	92.216	ENSCLAG00000012811	GTSF1	100	92.216	Chinchilla_lanigera
ENSJJAG00000003323	-	98	90.506	ENSCSAG00000005394	GTSF1	100	90.506	Chlorocebus_sabaeus
ENSJJAG00000003323	-	100	90.419	ENSCHOG00000001659	GTSF1	100	90.419	Choloepus_hoffmanni
ENSJJAG00000003323	-	99	68.072	ENSCPBG00000005134	-	72	68.072	Chrysemys_picta_bellii
ENSJJAG00000003323	-	96	59.494	ENSCPBG00000024905	-	86	59.494	Chrysemys_picta_bellii
ENSJJAG00000003323	-	100	88.024	ENSCANG00000033118	GTSF1	100	88.024	Colobus_angolensis_palliatus
ENSJJAG00000003323	-	100	83.832	ENSCANG00000031776	-	100	83.832	Colobus_angolensis_palliatus
ENSJJAG00000003323	-	100	93.413	ENSCGRG00001013814	Gtsf1	100	93.413	Cricetulus_griseus_chok1gshd
ENSJJAG00000003323	-	100	93.413	ENSCGRG00000007733	Gtsf1	100	93.413	Cricetulus_griseus_crigri
ENSJJAG00000003323	-	97	92.357	ENSDNOG00000001438	-	90	92.357	Dasypus_novemcinctus
ENSJJAG00000003323	-	100	93.413	ENSDORG00000003228	Gtsf1	100	93.413	Dipodomys_ordii
ENSJJAG00000003323	-	100	90.419	ENSETEG00000009310	GTSF1	100	90.419	Echinops_telfairi
ENSJJAG00000003323	-	100	92.216	ENSEASG00005010260	GTSF1	94	89.714	Equus_asinus_asinus
ENSJJAG00000003323	-	100	92.216	ENSECAG00000013618	GTSF1	100	92.216	Equus_caballus
ENSJJAG00000003323	-	100	92.216	ENSEEUG00000005185	GTSF1	100	92.216	Erinaceus_europaeus
ENSJJAG00000003323	-	100	64.671	ENSFCAG00000023672	-	90	64.848	Felis_catus
ENSJJAG00000003323	-	100	92.216	ENSFCAG00000010156	-	100	92.216	Felis_catus
ENSJJAG00000003323	-	77	54.762	ENSFALG00000007613	-	100	54.762	Ficedula_albicollis
ENSJJAG00000003323	-	100	88.623	ENSFDAG00000009383	GTSF1	100	88.623	Fukomys_damarensis
ENSJJAG00000003323	-	94	55.844	ENSGALG00000001109	GTSF1	95	55.844	Gallus_gallus
ENSJJAG00000003323	-	91	48.980	ENSGACG00000010783	-	88	46.012	Gasterosteus_aculeatus
ENSJJAG00000003323	-	64	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
ENSJJAG00000003323	-	98	62.264	ENSGAGG00000011062	GTSF1	86	59.880	Gopherus_agassizii
ENSJJAG00000003323	-	69	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
ENSJJAG00000003323	-	100	89.222	ENSGGOG00000016063	GTSF1	100	89.222	Gorilla_gorilla
ENSJJAG00000003323	-	100	89.820	ENSHGLG00000002436	GTSF1	100	89.820	Heterocephalus_glaber_female
ENSJJAG00000003323	-	100	89.820	ENSHGLG00100017301	GTSF1	100	89.820	Heterocephalus_glaber_male
ENSJJAG00000003323	-	96	46.497	ENSIPUG00000002483	-	82	46.753	Ictalurus_punctatus
ENSJJAG00000003323	-	100	94.012	ENSSTOG00000025170	GTSF1	100	94.012	Ictidomys_tridecemlineatus
ENSJJAG00000003323	-	91	48.299	ENSKMAG00000006038	-	80	48.299	Kryptolebias_marmoratus
ENSJJAG00000003323	-	99	59.375	ENSLACG00000008870	GTSF1	88	56.213	Latimeria_chalumnae
ENSJJAG00000003323	-	98	94.304	ENSLAFG00000016318	GTSF1	97	93.827	Loxodonta_africana
ENSJJAG00000003323	-	100	89.222	ENSMFAG00000041178	GTSF1	100	89.222	Macaca_fascicularis
ENSJJAG00000003323	-	100	89.222	ENSMMUG00000003758	GTSF1	100	89.222	Macaca_mulatta
ENSJJAG00000003323	-	100	89.222	ENSMNEG00000036779	GTSF1	100	89.222	Macaca_nemestrina
ENSJJAG00000003323	-	100	88.623	ENSMLEG00000028375	GTSF1	100	88.623	Mandrillus_leucophaeus
ENSJJAG00000003323	-	78	58.268	ENSMGAG00000000685	GTSF1	92	57.692	Meleagris_gallopavo
ENSJJAG00000003323	-	100	64.671	ENSMAUG00000018746	Gtsf1	100	68.639	Mesocricetus_auratus
ENSJJAG00000003323	-	100	92.216	ENSMICG00000008444	-	100	92.216	Microcebus_murinus
ENSJJAG00000003323	-	100	92.814	ENSMOCG00000018889	Gtsf1	100	92.814	Microtus_ochrogaster
ENSJJAG00000003323	-	100	85.030	ENSMODG00000019422	GTSF1	100	85.030	Monodelphis_domestica
ENSJJAG00000003323	-	100	92.814	MGP_CAROLIEiJ_G0020379	Gtsf1	99	95.238	Mus_caroli
ENSJJAG00000003323	-	100	92.814	ENSMUSG00000022487	Gtsf1	99	95.238	Mus_musculus
ENSJJAG00000003323	-	100	92.216	MGP_PahariEiJ_G0020378	Gtsf1	99	94.444	Mus_pahari
ENSJJAG00000003323	-	100	92.814	MGP_SPRETEiJ_G0021272	Gtsf1	99	95.238	Mus_spretus
ENSJJAG00000003323	-	98	93.671	ENSMPUG00000005669	-	98	93.293	Mustela_putorius_furo
ENSJJAG00000003323	-	100	91.617	ENSMPUG00000019323	-	100	91.617	Mustela_putorius_furo
ENSJJAG00000003323	-	100	83.234	ENSMPUG00000019140	-	100	83.234	Mustela_putorius_furo
ENSJJAG00000003323	-	100	87.425	ENSMLUG00000026557	-	100	87.425	Myotis_lucifugus
ENSJJAG00000003323	-	100	90.419	ENSMLUG00000012961	-	100	90.419	Myotis_lucifugus
ENSJJAG00000003323	-	100	93.413	ENSNGAG00000014213	Gtsf1	100	93.413	Nannospalax_galili
ENSJJAG00000003323	-	100	88.623	ENSNLEG00000017635	GTSF1	100	88.623	Nomascus_leucogenys
ENSJJAG00000003323	-	100	74.251	ENSMEUG00000016206	GTSF1	100	74.251	Notamacropus_eugenii
ENSJJAG00000003323	-	100	64.671	ENSOPRG00000017277	GTSF1	100	64.671	Ochotona_princeps
ENSJJAG00000003323	-	100	93.413	ENSODEG00000014220	GTSF1	100	93.413	Octodon_degus
ENSJJAG00000003323	-	99	69.277	ENSOANG00000011386	GTSF1	99	69.277	Ornithorhynchus_anatinus
ENSJJAG00000003323	-	100	92.814	ENSOCUG00000024495	GTSF1	100	92.814	Oryctolagus_cuniculus
ENSJJAG00000003323	-	70	50.442	ENSORLG00015005017	-	77	48.387	Oryzias_latipes_hsok
ENSJJAG00000003323	-	97	93.631	ENSOGAG00000017227	GTSF1	94	92.453	Otolemur_garnettii
ENSJJAG00000003323	-	100	91.018	ENSOARG00000016162	GTSF1	100	91.018	Ovis_aries
ENSJJAG00000003323	-	100	89.222	ENSPPAG00000028506	GTSF1	100	89.222	Pan_paniscus
ENSJJAG00000003323	-	100	92.216	ENSPPRG00000004344	-	100	92.216	Panthera_pardus
ENSJJAG00000003323	-	100	83.832	ENSPPRG00000017612	-	94	80.925	Panthera_pardus
ENSJJAG00000003323	-	100	84.431	ENSPTIG00000010868	-	94	81.503	Panthera_tigris_altaica
ENSJJAG00000003323	-	100	92.216	ENSPTIG00000020415	-	100	92.216	Panthera_tigris_altaica
ENSJJAG00000003323	-	100	89.222	ENSPTRG00000005041	GTSF1	100	89.222	Pan_troglodytes
ENSJJAG00000003323	-	100	89.222	ENSPANG00000020579	GTSF1	100	89.222	Papio_anubis
ENSJJAG00000003323	-	86	45.638	ENSPSIG00000009839	-	76	50.820	Pelodiscus_sinensis
ENSJJAG00000003323	-	97	70.253	ENSPSIG00000009968	GTSF1	82	68.263	Pelodiscus_sinensis
ENSJJAG00000003323	-	100	93.413	ENSPEMG00000009595	Gtsf1	100	93.413	Peromyscus_maniculatus_bairdii
ENSJJAG00000003323	-	100	80.240	ENSPCIG00000006731	GTSF1	100	80.240	Phascolarctos_cinereus
ENSJJAG00000003323	-	100	89.222	ENSPPYG00000004605	GTSF1	100	89.222	Pongo_abelii
ENSJJAG00000003323	-	98	81.013	ENSPCOG00000015201	-	99	78.395	Propithecus_coquereli
ENSJJAG00000003323	-	100	91.617	ENSPCOG00000016907	-	100	91.617	Propithecus_coquereli
ENSJJAG00000003323	-	100	92.216	ENSPVAG00000000333	GTSF1	100	92.216	Pteropus_vampyrus
ENSJJAG00000003323	-	93	48.026	ENSPNAG00000005737	-	82	48.026	Pygocentrus_nattereri
ENSJJAG00000003323	-	100	92.814	ENSRNOG00000036831	Gtsf1	91	91.279	Rattus_norvegicus
ENSJJAG00000003323	-	100	82.036	ENSRBIG00000039916	-	92	79.191	Rhinopithecus_bieti
ENSJJAG00000003323	-	100	88.623	ENSRBIG00000043438	-	100	88.623	Rhinopithecus_bieti
ENSJJAG00000003323	-	100	89.222	ENSRROG00000008137	GTSF1	100	89.222	Rhinopithecus_roxellana
ENSJJAG00000003323	-	100	87.425	ENSSBOG00000029460	GTSF1	100	87.425	Saimiri_boliviensis_boliviensis
ENSJJAG00000003323	-	100	85.030	ENSSHAG00000011633	GTSF1	100	85.030	Sarcophilus_harrisii
ENSJJAG00000003323	-	78	93.077	ENSSARG00000004928	GTSF1	78	93.077	Sorex_araneus
ENSJJAG00000003323	-	98	51.515	ENSSPUG00000010064	GTSF1	93	69.091	Sphenodon_punctatus
ENSJJAG00000003323	-	100	91.617	ENSSSCG00000026333	GTSF1	100	91.617	Sus_scrofa
ENSJJAG00000003323	-	77	57.143	ENSTGUG00000002008	-	98	57.143	Taeniopygia_guttata
ENSJJAG00000003323	-	97	91.083	ENSTBEG00000006154	GTSF1	100	90.683	Tupaia_belangeri
ENSJJAG00000003323	-	100	91.018	ENSTTRG00000004470	GTSF1	100	91.018	Tursiops_truncatus
ENSJJAG00000003323	-	100	92.814	ENSUAMG00000021669	GTSF1	94	92.683	Ursus_americanus
ENSJJAG00000003323	-	100	92.814	ENSUMAG00000011279	GTSF1	100	92.814	Ursus_maritimus
ENSJJAG00000003323	-	100	92.216	ENSVPAG00000007016	GTSF1	100	92.216	Vicugna_pacos
ENSJJAG00000003323	-	100	92.216	ENSVVUG00000023687	-	87	90.116	Vulpes_vulpes
ENSJJAG00000003323	-	99	62.733	ENSXETG00000033546	gtsf1	71	62.733	Xenopus_tropicalis