EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSJJAG00000004475 (Gene tree)
Gene ID
101603841
Gene Symbol
-
Alias
-
Full Name
U6 snRNA-associated Sm-like protein LSm5 pseudogene
Gene Type
protein_coding
Species
Jaculus_jaculus
Status
putative
Strand
Plus strand
Length
240 bases
Position
chrJH725440.1:36254143-36254382
Accession
101603841
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSJJAP00000002546LSMPF01423.228.8e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSJJAT00000005116-240-ENSJJAP0000000254679 (aa)--
Gene Model
Click here to download ENSJJAG00000004475's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000004475's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSJJAG00000004475-8236.232ENSJJAG00000012797-6936.232
ENSJJAG00000004475-10070.886ENSJJAG00000016144-7770.886
ENSJJAG00000004475-8433.824ENSJJAG00000022841-7333.824
ENSJJAG00000004475-10092.405ENSJJAG00000012145-8792.405
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSJJAG00000004475-10091.139ENSG00000106355LSM58791.139Homo_sapiens
ENSJJAG00000004475-10088.608ENSAPOG00000020779LSM59388.608Acanthochromis_polyacanthus
ENSJJAG00000004475-10088.608ENSAPOG00000011743LSM58988.608Acanthochromis_polyacanthus
ENSJJAG00000004475-10091.139ENSAMEG00000006700LSM58791.139Ailuropoda_melanoleuca
ENSJJAG00000004475-10088.608ENSAOCG00000001636lsm58788.608Amphiprion_ocellaris
ENSJJAG00000004475-10088.608ENSAPEG00000008151lsm58788.608Amphiprion_percula
ENSJJAG00000004475-6392.000ENSAPEG00000008201lsm58192.000Amphiprion_percula
ENSJJAG00000004475-10087.342ENSATEG00000020470lsm55987.342Anabas_testudineus
ENSJJAG00000004475-8193.750ENSAPLG00000008171LSM58693.750Anas_platyrhynchos
ENSJJAG00000004475-7191.071ENSACAG00000009530LSM59391.071Anolis_carolinensis
ENSJJAG00000004475-9787.013ENSANAG00000024192-8087.013Aotus_nancymaae
ENSJJAG00000004475-10070.886ENSANAG00000037758-8570.886Aotus_nancymaae
ENSJJAG00000004475-10089.873ENSANAG00000034409-8789.873Aotus_nancymaae
ENSJJAG00000004475-9590.667ENSACLG00000012891lsm58590.667Astatotilapia_calliptera
ENSJJAG00000004475-10073.171ENSAMXG00000035543lsm58773.171Astyanax_mexicanus
ENSJJAG00000004475-6170.833ENSBTAG00000052014-6370.833Bos_taurus
ENSJJAG00000004475-10091.139ENSBTAG00000002332LSM58791.139Bos_taurus
ENSJJAG00000004475-10068.354WBGene00003079lsm-58768.354Caenorhabditis_elegans
ENSJJAG00000004475-9779.221ENSCJAG00000005678-8779.221Callithrix_jacchus
ENSJJAG00000004475-10091.139ENSCJAG00000047379LSM58182.692Callithrix_jacchus
ENSJJAG00000004475-6384.000ENSCAFG00000030781-5884.000Canis_familiaris
ENSJJAG00000004475-10091.139ENSCAFG00000019261-8791.139Canis_familiaris
ENSJJAG00000004475-10091.139ENSCAFG00020004946LSM58791.139Canis_lupus_dingo
ENSJJAG00000004475-9466.216ENSCHIG00000021428-8967.949Capra_hircus
ENSJJAG00000004475-10091.139ENSCHIG00000024539LSM58791.139Capra_hircus
ENSJJAG00000004475-10089.873ENSCHIG00000004079-8789.873Capra_hircus
ENSJJAG00000004475-10091.139ENSTSYG00000006449-8791.139Carlito_syrichta
ENSJJAG00000004475-10079.747ENSTSYG00000028728-8679.747Carlito_syrichta
ENSJJAG00000004475-10065.823ENSTSYG00000036637-8465.823Carlito_syrichta
ENSJJAG00000004475-9976.923ENSTSYG00000026530-7776.923Carlito_syrichta
ENSJJAG00000004475-8093.651ENSCAPG00000006980LSM58493.651Cavia_aperea
ENSJJAG00000004475-10091.139ENSCPOG00000036386LSM58791.139Cavia_porcellus
ENSJJAG00000004475-10072.152ENSCCAG00000032792-8572.152Cebus_capucinus
ENSJJAG00000004475-9961.538ENSCCAG00000037334-8361.538Cebus_capucinus
ENSJJAG00000004475-10091.139ENSCCAG00000037808-8791.139Cebus_capucinus
ENSJJAG00000004475-10089.873ENSCCAG00000000821-8789.873Cebus_capucinus
ENSJJAG00000004475-10088.608ENSCCAG00000032123-8788.608Cebus_capucinus
ENSJJAG00000004475-10091.139ENSCATG00000040218LSM58791.139Cercocebus_atys
ENSJJAG00000004475-9781.818ENSCATG00000014790-9390.741Cercocebus_atys
ENSJJAG00000004475-10075.949ENSCLAG00000005062-7875.949Chinchilla_lanigera
ENSJJAG00000004475-10091.139ENSCLAG00000000202LSM58791.139Chinchilla_lanigera
ENSJJAG00000004475-9590.667ENSCHOG00000005335LSM59990.667Choloepus_hoffmanni
ENSJJAG00000004475-10091.139ENSCPBG00000013685LSM58791.139Chrysemys_picta_bellii
ENSJJAG00000004475-9483.784ENSCING00000020625-8383.784Ciona_intestinalis
ENSJJAG00000004475-9483.784ENSCSAVG00000001439-8483.784Ciona_savignyi
ENSJJAG00000004475-10091.139ENSCANG00000039909LSM58791.139Colobus_angolensis_palliatus
ENSJJAG00000004475-10091.139ENSCGRG00001015461Lsm58791.139Cricetulus_griseus_chok1gshd
ENSJJAG00000004475-8093.651ENSCGRG00000007677Lsm58493.651Cricetulus_griseus_crigri
ENSJJAG00000004475-10049.367ENSCSEG00000015286lsm58049.367Cynoglossus_semilaevis
ENSJJAG00000004475-10087.342ENSCVAG00000004262lsm58787.342Cyprinodon_variegatus
ENSJJAG00000004475-10087.342ENSDARG00000071573lsm58787.342Danio_rerio
ENSJJAG00000004475-10079.747ENSDNOG00000049495-8779.747Dasypus_novemcinctus
ENSJJAG00000004475-10091.139ENSDNOG00000034958LSM58991.139Dasypus_novemcinctus
ENSJJAG00000004475-10091.139ENSDORG00000009422Lsm58791.139Dipodomys_ordii
ENSJJAG00000004475-9775.325FBgn0035675CG66108575.325Drosophila_melanogaster
ENSJJAG00000004475-9767.532ENSETEG00000001469-8267.532Echinops_telfairi
ENSJJAG00000004475-7874.194ENSETEG00000016074-8074.194Echinops_telfairi
ENSJJAG00000004475-10091.139ENSETEG00000018068LSM58791.139Echinops_telfairi
ENSJJAG00000004475-10067.089ENSETEG00000000777-9067.089Echinops_telfairi
ENSJJAG00000004475-10069.620ENSETEG00000010651-8569.620Echinops_telfairi
ENSJJAG00000004475-10086.076ENSEBUG00000008540lsm58786.076Eptatretus_burgeri
ENSJJAG00000004475-10091.139ENSEASG00005003500LSM58791.139Equus_asinus_asinus
ENSJJAG00000004475-10074.684ENSECAG00000018445LSM58574.684Equus_caballus
ENSJJAG00000004475-5987.234ENSEEUG00000004102LSM57887.234Erinaceus_europaeus
ENSJJAG00000004475-10087.342ENSELUG00000007792lsm58787.342Esox_lucius
ENSJJAG00000004475-10091.139ENSFCAG00000000230LSM58791.139Felis_catus
ENSJJAG00000004475-8193.750ENSFALG00000001892LSM57793.750Ficedula_albicollis
ENSJJAG00000004475-8666.176ENSFDAG00000008685-7966.176Fukomys_damarensis
ENSJJAG00000004475-10091.139ENSFDAG00000008767LSM58791.139Fukomys_damarensis
ENSJJAG00000004475-8179.688ENSFHEG00000004011lsm56879.688Fundulus_heteroclitus
ENSJJAG00000004475-10087.342ENSGMOG00000018235lsm58887.342Gadus_morhua
ENSJJAG00000004475-10089.873ENSGALG00000041625LSM58789.873Gallus_gallus
ENSJJAG00000004475-6392.000ENSGAFG00000016824lsm58192.000Gambusia_affinis
ENSJJAG00000004475-10088.608ENSGACG00000005528lsm58788.608Gasterosteus_aculeatus
ENSJJAG00000004475-10091.139ENSGAGG00000015593LSM58791.139Gopherus_agassizii
ENSJJAG00000004475-10091.139ENSGGOG00000043469LSM58791.139Gorilla_gorilla
ENSJJAG00000004475-9590.667ENSHBUG00000013773lsm58590.667Haplochromis_burtoni
ENSJJAG00000004475-10091.139ENSHGLG00000011765LSM58791.139Heterocephalus_glaber_female
ENSJJAG00000004475-10087.342ENSHGLG00100015610LSM58787.342Heterocephalus_glaber_male
ENSJJAG00000004475-10048.101ENSHCOG00000008288lsm58048.101Hippocampus_comes
ENSJJAG00000004475-10086.076ENSIPUG00000021095LSM58786.076Ictalurus_punctatus
ENSJJAG00000004475-9177.027ENSSTOG00000033886-8377.027Ictidomys_tridecemlineatus
ENSJJAG00000004475-10091.139ENSSTOG00000012662LSM58791.139Ictidomys_tridecemlineatus
ENSJJAG00000004475-10087.342ENSKMAG00000021861lsm58787.342Kryptolebias_marmoratus
ENSJJAG00000004475-7173.214ENSLBEG00000017379lsm59273.214Labrus_bergylta
ENSJJAG00000004475-10087.342ENSLBEG00000009235LSM56287.342Labrus_bergylta
ENSJJAG00000004475-10089.873ENSLACG00000022448LSM58789.873Latimeria_chalumnae
ENSJJAG00000004475-10087.342ENSLOCG00000012903lsm58787.342Lepisosteus_oculatus
ENSJJAG00000004475-9767.532ENSLAFG00000027938-8267.532Loxodonta_africana
ENSJJAG00000004475-10091.139ENSLAFG00000029579LSM58791.139Loxodonta_africana
ENSJJAG00000004475-5989.362ENSMFAG00000031187-8089.362Macaca_fascicularis
ENSJJAG00000004475-10087.342ENSMFAG00000030152-8787.342Macaca_fascicularis
ENSJJAG00000004475-10091.139ENSMFAG00000038508LSM58791.139Macaca_fascicularis
ENSJJAG00000004475-6682.692ENSMMUG00000045129-8182.692Macaca_mulatta
ENSJJAG00000004475-10087.342ENSMMUG00000030131-8787.342Macaca_mulatta
ENSJJAG00000004475-9781.818ENSMMUG00000039822-8481.818Macaca_mulatta
ENSJJAG00000004475-10091.139ENSMNEG00000015331LSM58791.139Macaca_nemestrina
ENSJJAG00000004475-10087.342ENSMNEG00000037935-8787.342Macaca_nemestrina
ENSJJAG00000004475-9780.519ENSMLEG00000034037-8580.519Mandrillus_leucophaeus
ENSJJAG00000004475-10091.139ENSMLEG00000024945LSM58791.139Mandrillus_leucophaeus
ENSJJAG00000004475-10083.544ENSMAMG00000012869lsm58783.544Mastacembelus_armatus
ENSJJAG00000004475-9590.667ENSMZEG00005019554lsm58590.667Maylandia_zebra
ENSJJAG00000004475-10089.873ENSMGAG00000012117LSM58789.873Meleagris_gallopavo
ENSJJAG00000004475-10089.873ENSMAUG00000008132-8789.873Mesocricetus_auratus
ENSJJAG00000004475-10091.139ENSMAUG00000012222Lsm58791.139Mesocricetus_auratus
ENSJJAG00000004475-9768.831ENSMICG00000033928-7968.831Microcebus_murinus
ENSJJAG00000004475-10091.139ENSMICG00000005353LSM58791.139Microcebus_murinus
ENSJJAG00000004475-10091.139ENSMOCG00000012018Lsm58791.139Microtus_ochrogaster
ENSJJAG00000004475-9088.732ENSMMOG00000004026lsm58288.732Mola_mola
ENSJJAG00000004475-6392.000ENSMODG00000013274-8192.000Monodelphis_domestica
ENSJJAG00000004475-6388.000ENSMALG00000010343lsm58188.000Monopterus_albus
ENSJJAG00000004475-10091.139MGP_CAROLIEiJ_G0028421Lsm510092.857Mus_caroli
ENSJJAG00000004475-10091.139ENSMUSG00000091625Lsm510092.857Mus_musculus
ENSJJAG00000004475-10091.139MGP_PahariEiJ_G0022171Lsm510092.857Mus_pahari
ENSJJAG00000004475-10091.139MGP_SPRETEiJ_G0029423Lsm510092.857Mus_spretus
ENSJJAG00000004475-10091.139ENSMLUG00000017028LSM58791.139Myotis_lucifugus
ENSJJAG00000004475-9772.727ENSNGAG00000022569-8172.727Nannospalax_galili
ENSJJAG00000004475-10091.139ENSNGAG00000024142Lsm58791.139Nannospalax_galili
ENSJJAG00000004475-10079.012ENSNGAG00000017707-8679.012Nannospalax_galili
ENSJJAG00000004475-5793.333ENSNBRG00000011386lsm56093.333Neolamprologus_brichardi
ENSJJAG00000004475-5784.444ENSNBRG00000009964LSM59684.444Neolamprologus_brichardi
ENSJJAG00000004475-10091.139ENSNLEG00000015268LSM58791.139Nomascus_leucogenys
ENSJJAG00000004475-8093.651ENSOPRG00000002443LSM58493.651Ochotona_princeps
ENSJJAG00000004475-10091.139ENSODEG00000019072-8791.139Octodon_degus
ENSJJAG00000004475-10091.139ENSODEG00000008258-8791.139Octodon_degus
ENSJJAG00000004475-8558.209ENSOANG00000014540-8958.209Ornithorhynchus_anatinus
ENSJJAG00000004475-10091.139ENSOCUG00000029043LSM58791.139Oryctolagus_cuniculus
ENSJJAG00000004475-10087.342ENSORLG00000027725lsm55187.342Oryzias_latipes
ENSJJAG00000004475-10087.342ENSORLG00020003019lsm57887.342Oryzias_latipes_hni
ENSJJAG00000004475-10087.342ENSORLG00015003338lsm58787.342Oryzias_latipes_hsok
ENSJJAG00000004475-10086.076ENSOMEG00000001078lsm58786.076Oryzias_melastigma
ENSJJAG00000004475-10091.139ENSOGAG00000013892LSM58791.139Otolemur_garnettii
ENSJJAG00000004475-10091.139ENSOARG00000006944LSM58791.139Ovis_aries
ENSJJAG00000004475-10091.139ENSPPAG00000003697-8791.139Pan_paniscus
ENSJJAG00000004475-10091.139ENSPPRG00000002550LSM58791.139Panthera_pardus
ENSJJAG00000004475-10091.139ENSPTIG00000015604LSM58791.139Panthera_tigris_altaica
ENSJJAG00000004475-10073.418ENSPTRG00000049488-8674.684Pan_troglodytes
ENSJJAG00000004475-10091.139ENSPTRG00000019057LSM58791.139Pan_troglodytes
ENSJJAG00000004475-9781.818ENSPANG00000032538-8481.818Papio_anubis
ENSJJAG00000004475-10086.076ENSPANG00000033477-8786.076Papio_anubis
ENSJJAG00000004475-10091.139ENSPANG00000032179-8791.139Papio_anubis
ENSJJAG00000004475-10087.342ENSPKIG00000011910lsm58787.342Paramormyrops_kingsleyae
ENSJJAG00000004475-8193.750ENSPSIG00000014796LSM58693.750Pelodiscus_sinensis
ENSJJAG00000004475-6392.000ENSPMGG00000011699lsm58192.000Periophthalmus_magnuspinnatus
ENSJJAG00000004475-5989.362ENSPEMG00000019994-8089.362Peromyscus_maniculatus_bairdii
ENSJJAG00000004475-10063.291ENSPEMG00000022375-8563.291Peromyscus_maniculatus_bairdii
ENSJJAG00000004475-10087.342ENSPFOG00000001433lsm58787.342Poecilia_formosa
ENSJJAG00000004475-10087.342ENSPLAG00000009665lsm58787.342Poecilia_latipinna
ENSJJAG00000004475-10087.342ENSPMEG00000022265lsm58787.342Poecilia_mexicana
ENSJJAG00000004475-6392.000ENSPREG00000022452lsm58192.000Poecilia_reticulata
ENSJJAG00000004475-10087.342ENSPPYG00000017661LSM58787.342Pongo_abelii
ENSJJAG00000004475-10091.139ENSPCAG00000013740LSM59891.139Procavia_capensis
ENSJJAG00000004475-10091.139ENSPVAG00000009786LSM58791.139Pteropus_vampyrus
ENSJJAG00000004475-9590.667ENSPNYG00000022236lsm58590.667Pundamilia_nyererei
ENSJJAG00000004475-10086.076ENSPNAG00000001887lsm58786.076Pygocentrus_nattereri
ENSJJAG00000004475-10091.139ENSRNOG00000042126Lsm58791.139Rattus_norvegicus
ENSJJAG00000004475-10086.250ENSRNOG00000027305AABR07065089.18786.250Rattus_norvegicus
ENSJJAG00000004475-10091.139ENSRBIG00000030714-8791.139Rhinopithecus_bieti
ENSJJAG00000004475-10091.139ENSRBIG00000027803-8791.139Rhinopithecus_bieti
ENSJJAG00000004475-10089.873ENSRBIG00000024431-8789.873Rhinopithecus_bieti
ENSJJAG00000004475-10091.139ENSRBIG00000030340-8791.139Rhinopithecus_bieti
ENSJJAG00000004475-10091.139ENSRROG00000004655-8791.139Rhinopithecus_roxellana
ENSJJAG00000004475-10091.139ENSRROG00000023884-8791.139Rhinopithecus_roxellana
ENSJJAG00000004475-10091.139ENSRROG00000042782-8791.139Rhinopithecus_roxellana
ENSJJAG00000004475-8748.649YER146W-8048.649Saccharomyces_cerevisiae
ENSJJAG00000004475-10069.620ENSSBOG00000034794-8569.620Saimiri_boliviensis_boliviensis
ENSJJAG00000004475-9792.208ENSSBOG00000019124-8592.208Saimiri_boliviensis_boliviensis
ENSJJAG00000004475-10091.139ENSSBOG00000012312LSM58791.139Saimiri_boliviensis_boliviensis
ENSJJAG00000004475-10087.342ENSSFOG00015010099lsm58787.342Scleropages_formosus
ENSJJAG00000004475-10049.367ENSSMAG00000007895lsm58049.367Scophthalmus_maximus
ENSJJAG00000004475-6392.000ENSSDUG00000010762lsm58192.000Seriola_dumerili
ENSJJAG00000004475-8778.261ENSSLDG00000008014-8278.261Seriola_lalandi_dorsalis
ENSJJAG00000004475-10087.342ENSSLDG00000025242lsm58787.342Seriola_lalandi_dorsalis
ENSJJAG00000004475-7191.071ENSSARG00000003330LSM56291.071Sorex_araneus
ENSJJAG00000004475-10091.139ENSSPUG00000002690LSM58791.139Sphenodon_punctatus
ENSJJAG00000004475-10049.367ENSSPAG00000005435lsm58049.367Stegastes_partitus
ENSJJAG00000004475-10091.139ENSSSCG00000026064-8791.139Sus_scrofa
ENSJJAG00000004475-8782.609ENSSSCG00000029661-9682.609Sus_scrofa
ENSJJAG00000004475-10087.342ENSTGUG00000017539LSM58787.342Taeniopygia_guttata
ENSJJAG00000004475-9583.750ENSTRUG00000017749lsm56283.750Takifugu_rubripes
ENSJJAG00000004475-9590.667ENSTNIG00000008695lsm58590.667Tetraodon_nigroviridis
ENSJJAG00000004475-10091.139ENSTBEG00000004876LSM58791.139Tupaia_belangeri
ENSJJAG00000004475-10091.139ENSTTRG00000004237LSM58791.139Tursiops_truncatus
ENSJJAG00000004475-6682.692ENSUAMG00000009786LSM56882.692Ursus_americanus
ENSJJAG00000004475-10091.139ENSUMAG00000002625LSM55791.139Ursus_maritimus
ENSJJAG00000004475-10091.139ENSVPAG00000009985LSM58791.139Vicugna_pacos
ENSJJAG00000004475-10091.139ENSVVUG00000021311LSM58791.139Vulpes_vulpes
ENSJJAG00000004475-10087.342ENSXETG00000026465lsm59687.342Xenopus_tropicalis
ENSJJAG00000004475-6392.000ENSXCOG00000015348lsm58192.000Xiphophorus_couchianus
ENSJJAG00000004475-10087.342ENSXMAG00000029988lsm58787.342Xiphophorus_maculatus

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