EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000004558 (Gene tree)
Gene ID: 101593599
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 255 bases
Position: chrJH725454.1:441868-442122
Accession: 101593599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002586	LSM	PF01423.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000005205	-	255	XM_012948223	ENSJJAP00000002586	84 (aa)	XP_012803677	UPI00064CF93D

Gene Model

Click here to download ENSJJAG00000004558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000004558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000004558	-	77	43.077	ENSJJAG00000011211	-	81	43.077
ENSJJAG00000004558	-	75	47.619	ENSJJAG00000013845	-	79	47.619
ENSJJAG00000004558	-	77	83.077	ENSJJAG00000004828	-	100	83.077
ENSJJAG00000004558	-	89	82.667	ENSJJAG00000011272	-	100	81.395
ENSJJAG00000004558	-	100	77.381	ENSJJAG00000010502	-	100	77.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000004558	-	89	82.667	ENSG00000139343	SNRPF	100	81.395	Homo_sapiens
ENSJJAG00000004558	-	88	79.730	ENSAPOG00000003377	snrpf	66	78.824	Acanthochromis_polyacanthus
ENSJJAG00000004558	-	90	71.053	ENSAMEG00000018718	-	100	72.093	Ailuropoda_melanoleuca
ENSJJAG00000004558	-	88	82.432	ENSAMEG00000002166	-	100	81.176	Ailuropoda_melanoleuca
ENSJJAG00000004558	-	87	79.452	ENSACIG00000013216	snrpf	99	78.571	Amphilophus_citrinellus
ENSJJAG00000004558	-	87	79.452	ENSAOCG00000015108	snrpf	99	78.571	Amphiprion_ocellaris
ENSJJAG00000004558	-	87	79.452	ENSAPEG00000022022	snrpf	99	78.571	Amphiprion_percula
ENSJJAG00000004558	-	87	79.452	ENSATEG00000022625	snrpf	90	78.571	Anabas_testudineus
ENSJJAG00000004558	-	88	81.081	ENSACAG00000014073	SNRPF	98	80.000	Anolis_carolinensis
ENSJJAG00000004558	-	89	60.000	ENSANAG00000025860	-	100	60.465	Aotus_nancymaae
ENSJJAG00000004558	-	88	77.027	ENSANAG00000020297	-	78	76.471	Aotus_nancymaae
ENSJJAG00000004558	-	89	82.667	ENSANAG00000032845	SNRPF	100	81.395	Aotus_nancymaae
ENSJJAG00000004558	-	87	79.452	ENSACLG00000016066	snrpf	99	78.571	Astatotilapia_calliptera
ENSJJAG00000004558	-	89	77.333	ENSAMXG00000007421	snrpf	100	76.744	Astyanax_mexicanus
ENSJJAG00000004558	-	96	75.309	ENSBTAG00000050012	-	100	75.309	Bos_taurus
ENSJJAG00000004558	-	89	82.667	ENSBTAG00000016271	SNRPF	100	81.395	Bos_taurus
ENSJJAG00000004558	-	89	57.333	WBGene00004918	snr-5	88	57.333	Caenorhabditis_elegans
ENSJJAG00000004558	-	89	82.667	ENSCJAG00000002705	-	100	81.395	Callithrix_jacchus
ENSJJAG00000004558	-	89	82.667	ENSCAFG00000006395	-	77	81.395	Canis_familiaris
ENSJJAG00000004558	-	87	75.342	ENSCAFG00000031151	-	98	77.381	Canis_familiaris
ENSJJAG00000004558	-	87	75.342	ENSCAFG00020010823	-	98	77.381	Canis_lupus_dingo
ENSJJAG00000004558	-	87	76.712	ENSCAFG00020013161	-	78	76.712	Canis_lupus_dingo
ENSJJAG00000004558	-	89	76.316	ENSTSYG00000036502	-	100	75.862	Carlito_syrichta
ENSJJAG00000004558	-	89	72.000	ENSTSYG00000030635	-	100	72.093	Carlito_syrichta
ENSJJAG00000004558	-	94	77.778	ENSTSYG00000031636	-	68	77.778	Carlito_syrichta
ENSJJAG00000004558	-	88	82.432	ENSCAPG00000007242	SNRPF	100	81.176	Cavia_aperea
ENSJJAG00000004558	-	89	82.667	ENSCPOG00000013898	SNRPF	100	81.395	Cavia_porcellus
ENSJJAG00000004558	-	89	82.667	ENSCCAG00000037378	-	100	81.395	Cebus_capucinus
ENSJJAG00000004558	-	87	82.192	ENSCCAG00000017356	-	100	81.395	Cebus_capucinus
ENSJJAG00000004558	-	100	75.581	ENSCCAG00000033627	-	68	75.581	Cebus_capucinus
ENSJJAG00000004558	-	89	82.667	ENSCLAG00000007200	SNRPF	100	81.395	Chinchilla_lanigera
ENSJJAG00000004558	-	89	82.667	ENSCSAG00000003602	-	70	81.395	Chlorocebus_sabaeus
ENSJJAG00000004558	-	76	79.688	ENSCHOG00000009392	SNRPF	100	79.688	Choloepus_hoffmanni
ENSJJAG00000004558	-	99	79.518	ENSCPBG00000024287	-	67	79.518	Chrysemys_picta_bellii
ENSJJAG00000004558	-	89	74.667	ENSCPBG00000006227	-	100	73.256	Chrysemys_picta_bellii
ENSJJAG00000004558	-	100	73.256	ENSCPBG00000026463	-	100	73.256	Chrysemys_picta_bellii
ENSJJAG00000004558	-	100	78.571	ENSCPBG00000001985	-	100	78.571	Chrysemys_picta_bellii
ENSJJAG00000004558	-	99	74.118	ENSCSAVG00000007498	-	97	74.118	Ciona_savignyi
ENSJJAG00000004558	-	89	76.000	ENSCGRG00001008965	-	67	75.581	Cricetulus_griseus_chok1gshd
ENSJJAG00000004558	-	89	82.667	ENSCGRG00001017100	-	100	81.395	Cricetulus_griseus_chok1gshd
ENSJJAG00000004558	-	94	75.949	ENSCGRG00000018878	-	99	75.949	Cricetulus_griseus_crigri
ENSJJAG00000004558	-	89	82.667	ENSCGRG00000000336	-	100	81.395	Cricetulus_griseus_crigri
ENSJJAG00000004558	-	89	78.667	ENSCSEG00000004748	snrpf	100	77.907	Cynoglossus_semilaevis
ENSJJAG00000004558	-	88	79.730	ENSCVAG00000000397	snrpf	67	78.824	Cyprinodon_variegatus
ENSJJAG00000004558	-	89	77.922	ENSDARG00000105037	snrpf	100	77.273	Danio_rerio
ENSJJAG00000004558	-	89	81.333	ENSDNOG00000048989	-	77	80.233	Dasypus_novemcinctus
ENSJJAG00000004558	-	89	66.667	ENSDNOG00000049373	-	75	65.116	Dasypus_novemcinctus
ENSJJAG00000004558	-	89	82.667	ENSDNOG00000043775	-	55	81.395	Dasypus_novemcinctus
ENSJJAG00000004558	-	86	75.000	ENSDORG00000025351	-	100	75.000	Dipodomys_ordii
ENSJJAG00000004558	-	70	83.051	ENSDORG00000029740	-	85	81.429	Dipodomys_ordii
ENSJJAG00000004558	-	99	62.353	FBgn0000426	SmF	97	62.353	Drosophila_melanogaster
ENSJJAG00000004558	-	89	82.667	ENSETEG00000001558	-	100	81.395	Echinops_telfairi
ENSJJAG00000004558	-	95	60.000	ENSEBUG00000001793	-	86	60.000	Eptatretus_burgeri
ENSJJAG00000004558	-	89	82.667	ENSECAG00000019817	SNRPF	70	81.395	Equus_caballus
ENSJJAG00000004558	-	88	82.432	ENSEEUG00000013509	SNRPF	100	81.176	Erinaceus_europaeus
ENSJJAG00000004558	-	100	75.581	ENSELUG00000007737	RUXF	99	75.581	Esox_lucius
ENSJJAG00000004558	-	89	77.333	ENSELUG00000003121	RUXF	100	76.744	Esox_lucius
ENSJJAG00000004558	-	89	82.667	ENSFCAG00000029966	-	100	81.395	Felis_catus
ENSJJAG00000004558	-	98	65.476	ENSFCAG00000031148	-	77	65.476	Felis_catus
ENSJJAG00000004558	-	89	60.000	ENSFCAG00000021942	-	100	61.628	Felis_catus
ENSJJAG00000004558	-	88	82.432	ENSFALG00000010799	SNRPF	99	81.176	Ficedula_albicollis
ENSJJAG00000004558	-	89	82.667	ENSFDAG00000002831	-	100	81.395	Fukomys_damarensis
ENSJJAG00000004558	-	88	79.730	ENSFHEG00000003240	snrpf	75	78.824	Fundulus_heteroclitus
ENSJJAG00000004558	-	88	79.730	ENSGMOG00000007741	snrpf	100	78.824	Gadus_morhua
ENSJJAG00000004558	-	89	82.667	ENSGALG00000011409	SNRPF	100	81.395	Gallus_gallus
ENSJJAG00000004558	-	87	79.452	ENSGAFG00000016187	snrpf	97	78.571	Gambusia_affinis
ENSJJAG00000004558	-	88	78.378	ENSGACG00000020055	snrpf	100	77.647	Gasterosteus_aculeatus
ENSJJAG00000004558	-	86	83.333	ENSGAGG00000012945	-	77	80.952	Gopherus_agassizii
ENSJJAG00000004558	-	82	73.913	ENSGAGG00000014132	-	95	67.089	Gopherus_agassizii
ENSJJAG00000004558	-	69	79.310	ENSGAGG00000011163	-	100	79.310	Gopherus_agassizii
ENSJJAG00000004558	-	74	79.032	ENSGAGG00000020974	-	52	79.032	Gopherus_agassizii
ENSJJAG00000004558	-	94	78.481	ENSGAGG00000022991	-	92	78.481	Gopherus_agassizii
ENSJJAG00000004558	-	94	67.089	ENSGGOG00000039564	-	96	67.089	Gorilla_gorilla
ENSJJAG00000004558	-	98	66.667	ENSGGOG00000039936	-	95	66.667	Gorilla_gorilla
ENSJJAG00000004558	-	89	82.667	ENSGGOG00000001127	-	100	81.395	Gorilla_gorilla
ENSJJAG00000004558	-	89	82.667	ENSHGLG00000009108	SNRPF	100	81.395	Heterocephalus_glaber_female
ENSJJAG00000004558	-	89	81.333	ENSHGLG00000021172	-	100	80.233	Heterocephalus_glaber_female
ENSJJAG00000004558	-	89	81.333	ENSHGLG00100019596	-	100	80.233	Heterocephalus_glaber_male
ENSJJAG00000004558	-	88	82.432	ENSHGLG00100008103	-	100	81.176	Heterocephalus_glaber_male
ENSJJAG00000004558	-	75	67.143	ENSHCOG00000018663	snrpf	55	67.143	Hippocampus_comes
ENSJJAG00000004558	-	89	80.000	ENSIPUG00000018994	snrpf	100	79.070	Ictalurus_punctatus
ENSJJAG00000004558	-	89	82.667	ENSSTOG00000010434	-	100	81.395	Ictidomys_tridecemlineatus
ENSJJAG00000004558	-	89	78.667	ENSKMAG00000013566	snrpf	100	77.907	Kryptolebias_marmoratus
ENSJJAG00000004558	-	89	78.667	ENSLBEG00000008800	snrpf	100	77.907	Labrus_bergylta
ENSJJAG00000004558	-	89	81.333	ENSLACG00000002456	-	74	80.233	Latimeria_chalumnae
ENSJJAG00000004558	-	89	77.333	ENSLOCG00000015744	snrpf	100	76.744	Lepisosteus_oculatus
ENSJJAG00000004558	-	88	82.432	ENSLAFG00000017426	SNRPF	99	81.176	Loxodonta_africana
ENSJJAG00000004558	-	87	78.082	ENSMAMG00000016593	snrpf	99	77.381	Mastacembelus_armatus
ENSJJAG00000004558	-	87	79.452	ENSMZEG00005014701	snrpf	99	78.571	Maylandia_zebra
ENSJJAG00000004558	-	88	81.081	ENSMGAG00000011453	-	77	80.000	Meleagris_gallopavo
ENSJJAG00000004558	-	89	77.333	ENSMAUG00000008799	-	100	76.744	Mesocricetus_auratus
ENSJJAG00000004558	-	89	70.667	ENSMAUG00000010289	-	88	70.667	Mesocricetus_auratus
ENSJJAG00000004558	-	75	84.127	ENSMAUG00000016909	-	100	82.432	Mesocricetus_auratus
ENSJJAG00000004558	-	75	84.127	ENSMAUG00000019737	-	100	82.432	Mesocricetus_auratus
ENSJJAG00000004558	-	89	78.667	ENSMICG00000030494	-	69	77.907	Microcebus_murinus
ENSJJAG00000004558	-	89	82.667	ENSMICG00000012153	-	100	81.395	Microcebus_murinus
ENSJJAG00000004558	-	89	82.667	ENSMOCG00000020437	Snrpf	100	81.395	Microtus_ochrogaster
ENSJJAG00000004558	-	81	69.118	ENSMOCG00000020220	-	100	70.513	Microtus_ochrogaster
ENSJJAG00000004558	-	89	70.667	ENSMOCG00000022166	-	90	71.951	Microtus_ochrogaster
ENSJJAG00000004558	-	88	78.378	ENSMMOG00000007127	snrpf	100	77.647	Mola_mola
ENSJJAG00000004558	-	89	82.667	ENSMODG00000008091	SNRPF	75	81.395	Monodelphis_domestica
ENSJJAG00000004558	-	87	79.452	ENSMALG00000012328	snrpf	99	78.571	Monopterus_albus
ENSJJAG00000004558	-	89	82.667	MGP_CAROLIEiJ_G0015735	-	100	81.395	Mus_caroli
ENSJJAG00000004558	-	89	82.667	ENSMUSG00000020018	Snrpf	100	81.395	Mus_musculus
ENSJJAG00000004558	-	89	82.667	MGP_PahariEiJ_G0031350	Snrpf	100	81.395	Mus_pahari
ENSJJAG00000004558	-	89	82.667	MGP_SPRETEiJ_G0016553	Snrpf	100	81.395	Mus_spretus
ENSJJAG00000004558	-	89	82.667	ENSMPUG00000007176	-	77	81.395	Mustela_putorius_furo
ENSJJAG00000004558	-	89	82.667	ENSMLUG00000027932	-	81	81.395	Myotis_lucifugus
ENSJJAG00000004558	-	100	66.279	ENSMLUG00000026269	-	81	66.279	Myotis_lucifugus
ENSJJAG00000004558	-	88	82.432	ENSMLUG00000013577	-	100	81.176	Myotis_lucifugus
ENSJJAG00000004558	-	89	82.667	ENSMLUG00000029201	-	81	81.395	Myotis_lucifugus
ENSJJAG00000004558	-	89	82.667	ENSMLUG00000026149	-	81	81.395	Myotis_lucifugus
ENSJJAG00000004558	-	89	82.667	ENSNGAG00000024292	-	100	81.395	Nannospalax_galili
ENSJJAG00000004558	-	75	76.190	ENSNGAG00000005851	-	74	76.190	Nannospalax_galili
ENSJJAG00000004558	-	88	79.730	ENSNBRG00000011682	snrpf	87	78.824	Neolamprologus_brichardi
ENSJJAG00000004558	-	88	59.459	ENSMEUG00000000671	SNRPF	100	61.176	Notamacropus_eugenii
ENSJJAG00000004558	-	89	82.667	ENSODEG00000010328	-	100	81.395	Octodon_degus
ENSJJAG00000004558	-	89	81.333	ENSOCUG00000010925	SNRPF	76	80.233	Oryctolagus_cuniculus
ENSJJAG00000004558	-	88	77.027	ENSORLG00020008216	snrpf	100	76.471	Oryzias_latipes_hni
ENSJJAG00000004558	-	88	77.027	ENSORLG00015007418	snrpf	100	76.471	Oryzias_latipes_hsok
ENSJJAG00000004558	-	87	78.082	ENSOMEG00000003018	snrpf	99	77.381	Oryzias_melastigma
ENSJJAG00000004558	-	89	82.667	ENSOGAG00000030323	-	100	82.558	Otolemur_garnettii
ENSJJAG00000004558	-	89	82.667	ENSOARG00000011853	-	75	81.395	Ovis_aries
ENSJJAG00000004558	-	94	69.620	ENSPPAG00000037479	-	96	69.620	Pan_paniscus
ENSJJAG00000004558	-	98	66.667	ENSPPAG00000037544	-	95	66.667	Pan_paniscus
ENSJJAG00000004558	-	89	82.667	ENSPPRG00000005875	-	100	81.395	Panthera_pardus
ENSJJAG00000004558	-	98	65.476	ENSPPRG00000007449	-	86	65.476	Panthera_pardus
ENSJJAG00000004558	-	98	66.667	ENSPTIG00000005117	-	100	66.667	Panthera_tigris_altaica
ENSJJAG00000004558	-	89	82.667	ENSPTIG00000007520	SNRPF	100	81.395	Panthera_tigris_altaica
ENSJJAG00000004558	-	94	68.354	ENSPTRG00000047717	-	96	68.354	Pan_troglodytes
ENSJJAG00000004558	-	98	66.667	ENSPTRG00000043814	-	95	66.667	Pan_troglodytes
ENSJJAG00000004558	-	88	79.730	ENSPKIG00000014784	snrpf	93	78.824	Paramormyrops_kingsleyae
ENSJJAG00000004558	-	88	82.432	ENSPSIG00000016462	SNRPF	99	81.176	Pelodiscus_sinensis
ENSJJAG00000004558	-	88	78.378	ENSPMGG00000023548	snrpf	100	77.647	Periophthalmus_magnuspinnatus
ENSJJAG00000004558	-	89	82.667	ENSPEMG00000023326	Snrpf	100	81.395	Peromyscus_maniculatus_bairdii
ENSJJAG00000004558	-	87	79.452	ENSPLAG00000023932	snrpf	99	78.571	Poecilia_latipinna
ENSJJAG00000004558	-	87	79.452	ENSPMEG00000003377	snrpf	99	78.571	Poecilia_mexicana
ENSJJAG00000004558	-	87	79.452	ENSPREG00000022635	snrpf	97	78.571	Poecilia_reticulata
ENSJJAG00000004558	-	89	82.667	ENSPPYG00000004847	-	100	81.395	Pongo_abelii
ENSJJAG00000004558	-	89	82.667	ENSPCOG00000023833	-	100	81.395	Propithecus_coquereli
ENSJJAG00000004558	-	89	82.667	ENSPVAG00000009036	SNRPF	100	81.395	Pteropus_vampyrus
ENSJJAG00000004558	-	87	79.452	ENSPNYG00000021712	snrpf	99	78.571	Pundamilia_nyererei
ENSJJAG00000004558	-	87	78.082	ENSPNAG00000019117	snrpf	99	77.381	Pygocentrus_nattereri
ENSJJAG00000004558	-	89	82.667	ENSRNOG00000005556	Snrpf	100	81.395	Rattus_norvegicus
ENSJJAG00000004558	-	89	81.333	ENSRBIG00000030414	-	100	79.070	Rhinopithecus_bieti
ENSJJAG00000004558	-	89	81.333	ENSRROG00000021975	-	100	79.070	Rhinopithecus_roxellana
ENSJJAG00000004558	-	83	47.887	YPR182W	SMX3	83	47.887	Saccharomyces_cerevisiae
ENSJJAG00000004558	-	89	82.667	ENSSBOG00000012868	-	100	81.395	Saimiri_boliviensis_boliviensis
ENSJJAG00000004558	-	89	82.667	ENSSBOG00000036179	-	100	81.395	Saimiri_boliviensis_boliviensis
ENSJJAG00000004558	-	89	72.000	ENSSBOG00000032297	-	100	72.093	Saimiri_boliviensis_boliviensis
ENSJJAG00000004558	-	89	67.949	ENSSBOG00000027638	-	100	68.539	Saimiri_boliviensis_boliviensis
ENSJJAG00000004558	-	88	82.432	ENSSHAG00000012294	SNRPF	77	81.176	Sarcophilus_harrisii
ENSJJAG00000004558	-	76	76.562	ENSSFOG00015021523	snrpf	96	76.562	Scleropages_formosus
ENSJJAG00000004558	-	89	77.333	ENSSMAG00000005533	snrpf	99	76.744	Scophthalmus_maximus
ENSJJAG00000004558	-	77	76.923	ENSSDUG00000016283	snrpf	77	76.923	Seriola_dumerili
ENSJJAG00000004558	-	89	78.667	ENSSLDG00000005119	snrpf	100	77.907	Seriola_lalandi_dorsalis
ENSJJAG00000004558	-	95	60.000	ENSSLDG00000003885	-	98	60.000	Seriola_lalandi_dorsalis
ENSJJAG00000004558	-	87	82.192	ENSSPUG00000014590	-	99	80.952	Sphenodon_punctatus
ENSJJAG00000004558	-	88	79.730	ENSSPAG00000003283	snrpf	97	78.824	Stegastes_partitus
ENSJJAG00000004558	-	89	82.667	ENSSSCG00000000895	SNRPF	100	81.395	Sus_scrofa
ENSJJAG00000004558	-	68	78.947	ENSTRUG00000014956	snrpf	99	77.941	Takifugu_rubripes
ENSJJAG00000004558	-	89	78.667	ENSTNIG00000012672	snrpf	100	77.907	Tetraodon_nigroviridis
ENSJJAG00000004558	-	89	60.000	ENSTTRG00000006070	SNRPF	100	61.628	Tursiops_truncatus
ENSJJAG00000004558	-	100	71.765	ENSUAMG00000001101	-	100	71.765	Ursus_americanus
ENSJJAG00000004558	-	89	82.667	ENSUAMG00000008176	-	100	81.395	Ursus_americanus
ENSJJAG00000004558	-	89	73.333	ENSUMAG00000006177	-	100	72.941	Ursus_maritimus
ENSJJAG00000004558	-	89	82.667	ENSUMAG00000003528	-	100	81.395	Ursus_maritimus
ENSJJAG00000004558	-	89	82.667	ENSVPAG00000008712	-	100	81.395	Vicugna_pacos
ENSJJAG00000004558	-	93	76.923	ENSVVUG00000023821	-	100	76.923	Vulpes_vulpes
ENSJJAG00000004558	-	88	64.474	ENSXETG00000021630	snrpf	100	65.517	Xenopus_tropicalis
ENSJJAG00000004558	-	87	79.452	ENSXCOG00000013860	snrpf	97	78.571	Xiphophorus_couchianus
ENSJJAG00000004558	-	87	79.452	ENSXMAG00000015448	snrpf	99	78.571	Xiphophorus_maculatus