EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000004576 (Gene tree)
Gene ID: 101606345
Gene Symbol: -
Alias: -
Full Name: zinc finger protein with KRAB and SCAN domains 3
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 5542 bases
Position: chrJH725590.1:2528969-2534510
Accession: 101606345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002597	zf-C2H2	PF00096.26	2.6e-43	1	7
ENSJJAP00000002597	zf-C2H2	PF00096.26	2.6e-43	2	7
ENSJJAP00000002597	zf-C2H2	PF00096.26	2.6e-43	3	7
ENSJJAP00000002597	zf-C2H2	PF00096.26	2.6e-43	4	7
ENSJJAP00000002597	zf-C2H2	PF00096.26	2.6e-43	5	7
ENSJJAP00000002597	zf-C2H2	PF00096.26	2.6e-43	6	7
ENSJJAP00000002597	zf-C2H2	PF00096.26	2.6e-43	7	7
ENSJJAP00000002597	zf-met	PF12874.7	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000005251	-	1641	XM_012951750	ENSJJAP00000002597	546 (aa)	XP_012807204	UPI00064D6BA0

Gene Model

Click here to download ENSJJAG00000004576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000004576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000004576	-	59	44.651	ENSJJAG00000014350	Zfp961	100	44.651
ENSJJAG00000004576	-	60	48.207	ENSJJAG00000021900	-	98	46.154
ENSJJAG00000004576	-	63	45.992	ENSJJAG00000012972	Zfp709	99	44.358
ENSJJAG00000004576	-	72	35.556	ENSJJAG00000015998	Zbtb14	69	33.533
ENSJJAG00000004576	-	60	48.696	ENSJJAG00000014531	Zfp661	97	47.826
ENSJJAG00000004576	-	59	54.598	ENSJJAG00000019878	Zfp1	98	54.598
ENSJJAG00000004576	-	83	47.287	ENSJJAG00000020082	-	99	55.479
ENSJJAG00000004576	-	51	44.545	ENSJJAG00000017493	Zfp236	59	44.545
ENSJJAG00000004576	-	50	42.667	ENSJJAG00000011464	Prdm5	83	41.772
ENSJJAG00000004576	-	93	32.707	ENSJJAG00000015716	Zfp202	97	41.129
ENSJJAG00000004576	-	60	33.865	ENSJJAG00000013954	Zfp64	88	34.804
ENSJJAG00000004576	-	53	47.668	ENSJJAG00000000983	Zfp628	66	49.655
ENSJJAG00000004576	-	53	53.774	ENSJJAG00000021785	Zfp574	73	34.211
ENSJJAG00000004576	-	50	35.519	ENSJJAG00000016355	Gfi1b	57	35.519
ENSJJAG00000004576	-	53	49.020	ENSJJAG00000011934	Zfp865	84	37.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000004576	-	99	79.422	ENSCGRG00001006591	Zkscan3	99	79.422	Cricetulus_griseus_chok1gshd
ENSJJAG00000004576	-	99	79.422	ENSCGRG00000001582	Zkscan3	99	79.422	Cricetulus_griseus_crigri
ENSJJAG00000004576	-	99	79.422	ENSMAUG00000009785	Zkscan3	99	79.422	Mesocricetus_auratus
ENSJJAG00000004576	-	99	79.242	ENSMOCG00000017860	Zkscan3	99	79.242	Microtus_ochrogaster
ENSJJAG00000004576	-	96	60.465	MGP_CAROLIEiJ_G0018274	Zkscan4	98	59.750	Mus_caroli
ENSJJAG00000004576	-	99	78.881	ENSMUSG00000021327	Zkscan3	99	79.740	Mus_musculus
ENSJJAG00000004576	-	97	63.060	ENSMUSG00000054931	Zkscan4	99	63.060	Mus_musculus
ENSJJAG00000004576	-	96	62.547	MGP_PahariEiJ_G0019324	Zkscan4	99	62.547	Mus_pahari
ENSJJAG00000004576	-	97	63.060	MGP_SPRETEiJ_G0019129	Zkscan4	99	63.060	Mus_spretus
ENSJJAG00000004576	-	96	62.684	ENSPCAG00000000195	ZKSCAN4	99	63.187	Procavia_capensis
ENSJJAG00000004576	-	96	67.647	ENSSSCG00000001204	ZKSCAN4	99	67.647	Sus_scrofa
ENSJJAG00000004576	-	71	64.962	ENSTTRG00000015632	-	99	64.962	Tursiops_truncatus