EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000004828 (Gene tree)
Gene ID: 101617311
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 198 bases
Position: chrJH725459.1:11172848-11173045
Accession: 101617311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002672	LSM	PF01423.22	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000005490	-	198	-	ENSJJAP00000002672	65 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000004828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000004828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000004828	-	100	94.030	ENSJJAG00000011272	-	78	94.030
ENSJJAG00000004828	-	98	84.375	ENSJJAG00000010502	-	76	84.375
ENSJJAG00000004828	-	82	47.170	ENSJJAG00000011211	-	66	47.170
ENSJJAG00000004828	-	82	50.943	ENSJJAG00000013845	-	66	50.943
ENSJJAG00000004828	-	100	83.077	ENSJJAG00000004558	-	77	83.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000004828	-	100	94.030	ENSG00000139343	SNRPF	78	94.030	Homo_sapiens
ENSJJAG00000004828	-	86	92.857	ENSAPOG00000003377	snrpf	52	91.045	Acanthochromis_polyacanthus
ENSJJAG00000004828	-	100	94.030	ENSAMEG00000002166	-	79	94.030	Ailuropoda_melanoleuca
ENSJJAG00000004828	-	86	83.929	ENSAMEG00000018718	-	77	84.848	Ailuropoda_melanoleuca
ENSJJAG00000004828	-	86	92.857	ENSACIG00000013216	snrpf	79	91.045	Amphilophus_citrinellus
ENSJJAG00000004828	-	86	92.857	ENSAOCG00000015108	snrpf	79	91.045	Amphiprion_ocellaris
ENSJJAG00000004828	-	86	92.857	ENSAPEG00000022022	snrpf	79	91.045	Amphiprion_percula
ENSJJAG00000004828	-	86	92.857	ENSATEG00000022625	snrpf	72	91.045	Anabas_testudineus
ENSJJAG00000004828	-	86	94.643	ENSACAG00000014073	SNRPF	77	92.537	Anolis_carolinensis
ENSJJAG00000004828	-	100	94.030	ENSANAG00000032845	SNRPF	78	94.030	Aotus_nancymaae
ENSJJAG00000004828	-	86	66.071	ENSANAG00000025860	-	74	67.164	Aotus_nancymaae
ENSJJAG00000004828	-	86	87.500	ENSANAG00000020297	-	61	86.567	Aotus_nancymaae
ENSJJAG00000004828	-	86	92.857	ENSACLG00000016066	snrpf	79	91.045	Astatotilapia_calliptera
ENSJJAG00000004828	-	86	89.286	ENSAMXG00000007421	snrpf	78	88.060	Astyanax_mexicanus
ENSJJAG00000004828	-	100	94.030	ENSBTAG00000016271	SNRPF	78	94.030	Bos_taurus
ENSJJAG00000004828	-	95	88.710	ENSBTAG00000050012	-	77	88.710	Bos_taurus
ENSJJAG00000004828	-	89	68.966	WBGene00004918	snr-5	68	68.966	Caenorhabditis_elegans
ENSJJAG00000004828	-	100	94.030	ENSCJAG00000002705	-	78	94.030	Callithrix_jacchus
ENSJJAG00000004828	-	82	92.453	ENSCAFG00000031151	-	77	89.394	Canis_familiaris
ENSJJAG00000004828	-	100	94.030	ENSCAFG00000006395	-	60	94.030	Canis_familiaris
ENSJJAG00000004828	-	89	89.655	ENSCAFG00020013161	-	62	89.655	Canis_lupus_dingo
ENSJJAG00000004828	-	82	92.453	ENSCAFG00020010823	-	77	89.394	Canis_lupus_dingo
ENSJJAG00000004828	-	86	89.474	ENSTSYG00000036502	-	78	88.235	Carlito_syrichta
ENSJJAG00000004828	-	86	82.143	ENSTSYG00000030635	-	77	82.090	Carlito_syrichta
ENSJJAG00000004828	-	98	85.938	ENSTSYG00000031636	-	54	85.938	Carlito_syrichta
ENSJJAG00000004828	-	100	94.030	ENSCAPG00000007242	SNRPF	79	94.030	Cavia_aperea
ENSJJAG00000004828	-	100	94.030	ENSCPOG00000013898	SNRPF	78	94.030	Cavia_porcellus
ENSJJAG00000004828	-	100	94.030	ENSCCAG00000037378	-	78	94.030	Cebus_capucinus
ENSJJAG00000004828	-	100	85.075	ENSCCAG00000033627	-	53	85.075	Cebus_capucinus
ENSJJAG00000004828	-	100	94.030	ENSCCAG00000017356	-	78	94.030	Cebus_capucinus
ENSJJAG00000004828	-	100	94.030	ENSCLAG00000007200	SNRPF	78	94.030	Chinchilla_lanigera
ENSJJAG00000004828	-	100	94.030	ENSCSAG00000003602	-	54	94.030	Chlorocebus_sabaeus
ENSJJAG00000004828	-	69	95.556	ENSCHOG00000009392	SNRPF	70	95.556	Choloepus_hoffmanni
ENSJJAG00000004828	-	100	85.075	ENSCPBG00000026463	-	78	85.075	Chrysemys_picta_bellii
ENSJJAG00000004828	-	100	89.231	ENSCPBG00000001985	-	77	89.231	Chrysemys_picta_bellii
ENSJJAG00000004828	-	86	87.500	ENSCPBG00000006227	-	78	85.075	Chrysemys_picta_bellii
ENSJJAG00000004828	-	100	93.846	ENSCPBG00000024287	-	52	93.846	Chrysemys_picta_bellii
ENSJJAG00000004828	-	100	85.075	ENSCSAVG00000007498	-	76	85.075	Ciona_savignyi
ENSJJAG00000004828	-	100	94.030	ENSCGRG00001017100	-	78	94.030	Cricetulus_griseus_chok1gshd
ENSJJAG00000004828	-	86	87.500	ENSCGRG00001008965	-	52	86.567	Cricetulus_griseus_chok1gshd
ENSJJAG00000004828	-	100	94.030	ENSCGRG00000000336	-	78	94.030	Cricetulus_griseus_crigri
ENSJJAG00000004828	-	92	86.667	ENSCGRG00000018878	-	75	86.667	Cricetulus_griseus_crigri
ENSJJAG00000004828	-	86	91.071	ENSCSEG00000004748	snrpf	78	89.552	Cynoglossus_semilaevis
ENSJJAG00000004828	-	86	92.857	ENSCVAG00000000397	snrpf	53	91.045	Cyprinodon_variegatus
ENSJJAG00000004828	-	86	89.655	ENSDARG00000105037	snrpf	78	88.406	Danio_rerio
ENSJJAG00000004828	-	86	80.357	ENSDNOG00000049373	-	58	77.612	Dasypus_novemcinctus
ENSJJAG00000004828	-	98	93.939	ENSDNOG00000048989	-	59	93.939	Dasypus_novemcinctus
ENSJJAG00000004828	-	86	94.643	ENSDORG00000029740	-	82	92.537	Dipodomys_ordii
ENSJJAG00000004828	-	82	84.906	ENSDORG00000025351	-	74	84.906	Dipodomys_ordii
ENSJJAG00000004828	-	100	74.627	FBgn0000426	SmF	76	74.627	Drosophila_melanogaster
ENSJJAG00000004828	-	100	94.030	ENSETEG00000001558	-	78	94.030	Echinops_telfairi
ENSJJAG00000004828	-	98	70.312	ENSEBUG00000001793	-	69	70.312	Eptatretus_burgeri
ENSJJAG00000004828	-	100	94.030	ENSECAG00000019817	SNRPF	54	94.030	Equus_caballus
ENSJJAG00000004828	-	100	94.030	ENSEEUG00000013509	SNRPF	79	94.030	Erinaceus_europaeus
ENSJJAG00000004828	-	100	83.582	ENSELUG00000007737	RUXF	77	83.582	Esox_lucius
ENSJJAG00000004828	-	86	89.286	ENSELUG00000003121	RUXF	78	88.060	Esox_lucius
ENSJJAG00000004828	-	100	94.030	ENSFCAG00000029966	-	78	94.030	Felis_catus
ENSJJAG00000004828	-	86	71.429	ENSFCAG00000021942	-	77	73.134	Felis_catus
ENSJJAG00000004828	-	97	69.231	ENSFCAG00000031148	-	60	69.231	Felis_catus
ENSJJAG00000004828	-	100	94.030	ENSFALG00000010799	SNRPF	78	94.030	Ficedula_albicollis
ENSJJAG00000004828	-	100	94.030	ENSFDAG00000002831	-	78	94.030	Fukomys_damarensis
ENSJJAG00000004828	-	86	92.857	ENSFHEG00000003240	snrpf	59	91.045	Fundulus_heteroclitus
ENSJJAG00000004828	-	86	92.857	ENSGMOG00000007741	snrpf	79	91.045	Gadus_morhua
ENSJJAG00000004828	-	100	94.030	ENSGALG00000011409	SNRPF	78	94.030	Gallus_gallus
ENSJJAG00000004828	-	86	92.857	ENSGAFG00000016187	snrpf	77	91.045	Gambusia_affinis
ENSJJAG00000004828	-	86	91.071	ENSGACG00000020055	snrpf	79	89.552	Gasterosteus_aculeatus
ENSJJAG00000004828	-	100	92.308	ENSGAGG00000012945	-	60	92.308	Gopherus_agassizii
ENSJJAG00000004828	-	77	84.000	ENSGAGG00000014132	-	72	73.333	Gopherus_agassizii
ENSJJAG00000004828	-	100	90.769	ENSGAGG00000022991	-	75	90.769	Gopherus_agassizii
ENSJJAG00000004828	-	89	91.379	ENSGAGG00000011163	-	100	91.379	Gopherus_agassizii
ENSJJAG00000004828	-	88	84.746	ENSGGOG00000039936	-	76	84.746	Gorilla_gorilla
ENSJJAG00000004828	-	100	94.030	ENSGGOG00000001127	-	79	94.030	Gorilla_gorilla
ENSJJAG00000004828	-	78	82.353	ENSGGOG00000039564	-	68	82.353	Gorilla_gorilla
ENSJJAG00000004828	-	100	94.030	ENSHGLG00000009108	SNRPF	78	94.030	Heterocephalus_glaber_female
ENSJJAG00000004828	-	86	94.643	ENSHGLG00000021172	-	78	92.537	Heterocephalus_glaber_female
ENSJJAG00000004828	-	86	94.643	ENSHGLG00100019596	-	78	92.537	Heterocephalus_glaber_male
ENSJJAG00000004828	-	100	94.030	ENSHGLG00100008103	-	79	94.030	Heterocephalus_glaber_male
ENSJJAG00000004828	-	86	92.857	ENSIPUG00000018994	snrpf	79	91.045	Ictalurus_punctatus
ENSJJAG00000004828	-	100	94.030	ENSSTOG00000010434	-	78	94.030	Ictidomys_tridecemlineatus
ENSJJAG00000004828	-	86	92.857	ENSKMAG00000013566	snrpf	78	91.045	Kryptolebias_marmoratus
ENSJJAG00000004828	-	86	92.857	ENSLBEG00000008800	snrpf	78	91.045	Labrus_bergylta
ENSJJAG00000004828	-	100	94.030	ENSLACG00000002456	-	57	94.030	Latimeria_chalumnae
ENSJJAG00000004828	-	86	89.286	ENSLOCG00000015744	snrpf	78	88.060	Lepisosteus_oculatus
ENSJJAG00000004828	-	100	94.030	ENSLAFG00000017426	SNRPF	78	94.030	Loxodonta_africana
ENSJJAG00000004828	-	86	92.857	ENSMAMG00000016593	snrpf	79	91.045	Mastacembelus_armatus
ENSJJAG00000004828	-	86	92.857	ENSMZEG00005014701	snrpf	79	91.045	Maylandia_zebra
ENSJJAG00000004828	-	100	94.030	ENSMGAG00000011453	-	60	94.030	Meleagris_gallopavo
ENSJJAG00000004828	-	100	94.030	ENSMAUG00000019737	-	91	94.030	Mesocricetus_auratus
ENSJJAG00000004828	-	91	93.220	ENSMAUG00000010289	-	76	93.220	Mesocricetus_auratus
ENSJJAG00000004828	-	100	94.030	ENSMAUG00000016909	-	91	94.030	Mesocricetus_auratus
ENSJJAG00000004828	-	86	89.286	ENSMAUG00000008799	-	78	88.060	Mesocricetus_auratus
ENSJJAG00000004828	-	100	94.030	ENSMICG00000012153	-	78	94.030	Microcebus_murinus
ENSJJAG00000004828	-	86	92.857	ENSMICG00000030494	-	54	91.045	Microcebus_murinus
ENSJJAG00000004828	-	86	83.929	ENSMOCG00000020220	-	84	84.848	Microtus_ochrogaster
ENSJJAG00000004828	-	86	82.143	ENSMOCG00000022166	-	69	82.540	Microtus_ochrogaster
ENSJJAG00000004828	-	100	94.030	ENSMOCG00000020437	Snrpf	78	94.030	Microtus_ochrogaster
ENSJJAG00000004828	-	86	91.071	ENSMMOG00000007127	snrpf	79	89.552	Mola_mola
ENSJJAG00000004828	-	100	94.030	ENSMODG00000008091	SNRPF	59	94.030	Monodelphis_domestica
ENSJJAG00000004828	-	86	92.857	ENSMALG00000012328	snrpf	79	91.045	Monopterus_albus
ENSJJAG00000004828	-	100	94.030	MGP_CAROLIEiJ_G0015735	-	78	94.030	Mus_caroli
ENSJJAG00000004828	-	100	94.030	ENSMUSG00000020018	Snrpf	78	94.030	Mus_musculus
ENSJJAG00000004828	-	100	94.030	MGP_PahariEiJ_G0031350	Snrpf	78	94.030	Mus_pahari
ENSJJAG00000004828	-	100	94.030	MGP_SPRETEiJ_G0016553	Snrpf	78	94.030	Mus_spretus
ENSJJAG00000004828	-	100	94.030	ENSMPUG00000007176	-	60	94.030	Mustela_putorius_furo
ENSJJAG00000004828	-	100	94.030	ENSMLUG00000026149	-	63	94.030	Myotis_lucifugus
ENSJJAG00000004828	-	100	74.627	ENSMLUG00000026269	-	63	74.627	Myotis_lucifugus
ENSJJAG00000004828	-	100	94.030	ENSMLUG00000027932	-	63	94.030	Myotis_lucifugus
ENSJJAG00000004828	-	100	94.030	ENSMLUG00000029201	-	63	94.030	Myotis_lucifugus
ENSJJAG00000004828	-	100	94.030	ENSMLUG00000013577	-	79	94.030	Myotis_lucifugus
ENSJJAG00000004828	-	100	94.030	ENSNGAG00000024292	-	78	94.030	Nannospalax_galili
ENSJJAG00000004828	-	91	86.441	ENSNGAG00000005851	-	69	86.441	Nannospalax_galili
ENSJJAG00000004828	-	86	92.857	ENSNBRG00000011682	snrpf	68	91.045	Neolamprologus_brichardi
ENSJJAG00000004828	-	86	60.714	ENSMEUG00000000671	SNRPF	79	64.179	Notamacropus_eugenii
ENSJJAG00000004828	-	100	94.030	ENSODEG00000010328	-	79	94.030	Octodon_degus
ENSJJAG00000004828	-	100	94.030	ENSOCUG00000010925	SNRPF	59	94.030	Oryctolagus_cuniculus
ENSJJAG00000004828	-	86	89.286	ENSORLG00020008216	snrpf	79	88.060	Oryzias_latipes_hni
ENSJJAG00000004828	-	86	89.286	ENSORLG00015007418	snrpf	79	88.060	Oryzias_latipes_hsok
ENSJJAG00000004828	-	86	91.071	ENSOMEG00000003018	snrpf	79	89.552	Oryzias_melastigma
ENSJJAG00000004828	-	86	94.643	ENSOGAG00000030323	-	78	91.045	Otolemur_garnettii
ENSJJAG00000004828	-	100	94.030	ENSOARG00000011853	-	58	94.030	Ovis_aries
ENSJJAG00000004828	-	88	86.441	ENSPPAG00000037544	-	76	86.441	Pan_paniscus
ENSJJAG00000004828	-	74	83.333	ENSPPAG00000037479	-	64	83.333	Pan_paniscus
ENSJJAG00000004828	-	97	69.231	ENSPPRG00000007449	-	66	69.231	Panthera_pardus
ENSJJAG00000004828	-	100	94.030	ENSPPRG00000005875	-	78	94.030	Panthera_pardus
ENSJJAG00000004828	-	100	94.030	ENSPTIG00000007520	SNRPF	78	94.030	Panthera_tigris_altaica
ENSJJAG00000004828	-	97	70.769	ENSPTIG00000005117	-	77	70.769	Panthera_tigris_altaica
ENSJJAG00000004828	-	74	81.250	ENSPTRG00000047717	-	64	81.250	Pan_troglodytes
ENSJJAG00000004828	-	88	86.441	ENSPTRG00000043814	-	76	86.441	Pan_troglodytes
ENSJJAG00000004828	-	86	92.857	ENSPKIG00000014784	snrpf	74	91.045	Paramormyrops_kingsleyae
ENSJJAG00000004828	-	100	94.030	ENSPSIG00000016462	SNRPF	78	94.030	Pelodiscus_sinensis
ENSJJAG00000004828	-	86	91.071	ENSPMGG00000023548	snrpf	79	89.552	Periophthalmus_magnuspinnatus
ENSJJAG00000004828	-	100	94.030	ENSPEMG00000023326	Snrpf	78	94.030	Peromyscus_maniculatus_bairdii
ENSJJAG00000004828	-	86	92.857	ENSPLAG00000023932	snrpf	79	91.045	Poecilia_latipinna
ENSJJAG00000004828	-	86	92.857	ENSPMEG00000003377	snrpf	79	91.045	Poecilia_mexicana
ENSJJAG00000004828	-	86	92.857	ENSPREG00000022635	snrpf	77	91.045	Poecilia_reticulata
ENSJJAG00000004828	-	100	94.030	ENSPPYG00000004847	-	78	94.030	Pongo_abelii
ENSJJAG00000004828	-	100	94.030	ENSPCOG00000023833	-	78	94.030	Propithecus_coquereli
ENSJJAG00000004828	-	100	94.030	ENSPVAG00000009036	SNRPF	78	94.030	Pteropus_vampyrus
ENSJJAG00000004828	-	86	92.857	ENSPNYG00000021712	snrpf	79	91.045	Pundamilia_nyererei
ENSJJAG00000004828	-	86	91.071	ENSPNAG00000019117	snrpf	79	89.552	Pygocentrus_nattereri
ENSJJAG00000004828	-	100	94.030	ENSRNOG00000005556	Snrpf	78	94.030	Rattus_norvegicus
ENSJJAG00000004828	-	86	92.857	ENSRBIG00000030414	-	78	89.552	Rhinopithecus_bieti
ENSJJAG00000004828	-	86	92.857	ENSRROG00000021975	-	78	89.552	Rhinopithecus_roxellana
ENSJJAG00000004828	-	82	59.259	YPR182W	SMX3	63	59.259	Saccharomyces_cerevisiae
ENSJJAG00000004828	-	86	75.000	ENSSBOG00000027638	-	77	76.119	Saimiri_boliviensis_boliviensis
ENSJJAG00000004828	-	86	78.571	ENSSBOG00000032297	-	76	79.104	Saimiri_boliviensis_boliviensis
ENSJJAG00000004828	-	100	94.030	ENSSBOG00000012868	-	78	94.030	Saimiri_boliviensis_boliviensis
ENSJJAG00000004828	-	100	94.030	ENSSBOG00000036179	-	78	94.030	Saimiri_boliviensis_boliviensis
ENSJJAG00000004828	-	100	94.030	ENSSHAG00000012294	SNRPF	60	94.030	Sarcophilus_harrisii
ENSJJAG00000004828	-	71	91.304	ENSSFOG00015021523	snrpf	69	91.304	Scleropages_formosus
ENSJJAG00000004828	-	86	91.071	ENSSMAG00000005533	snrpf	77	89.552	Scophthalmus_maximus
ENSJJAG00000004828	-	71	91.304	ENSSDUG00000016283	snrpf	55	91.304	Seriola_dumerili
ENSJJAG00000004828	-	86	92.857	ENSSLDG00000005119	snrpf	78	91.045	Seriola_lalandi_dorsalis
ENSJJAG00000004828	-	95	75.806	ENSSLDG00000003885	-	76	75.806	Seriola_lalandi_dorsalis
ENSJJAG00000004828	-	100	94.030	ENSSPUG00000014590	-	79	94.030	Sphenodon_punctatus
ENSJJAG00000004828	-	86	92.857	ENSSPAG00000003283	snrpf	76	91.045	Stegastes_partitus
ENSJJAG00000004828	-	100	94.030	ENSSSCG00000000895	SNRPF	78	94.030	Sus_scrofa
ENSJJAG00000004828	-	86	92.857	ENSTRUG00000014956	snrpf	97	91.045	Takifugu_rubripes
ENSJJAG00000004828	-	86	92.857	ENSTNIG00000012672	snrpf	78	91.045	Tetraodon_nigroviridis
ENSJJAG00000004828	-	86	60.714	ENSTTRG00000006070	SNRPF	78	64.179	Tursiops_truncatus
ENSJJAG00000004828	-	100	94.030	ENSUAMG00000008176	-	78	94.030	Ursus_americanus
ENSJJAG00000004828	-	100	84.848	ENSUAMG00000001101	-	78	84.848	Ursus_americanus
ENSJJAG00000004828	-	100	94.030	ENSUMAG00000003528	-	78	94.030	Ursus_maritimus
ENSJJAG00000004828	-	86	87.500	ENSUMAG00000006177	-	78	83.333	Ursus_maritimus
ENSJJAG00000004828	-	100	94.030	ENSVPAG00000008712	-	78	94.030	Vicugna_pacos
ENSJJAG00000004828	-	89	87.931	ENSVVUG00000023821	-	74	87.931	Vulpes_vulpes
ENSJJAG00000004828	-	86	65.517	ENSXETG00000021630	snrpf	79	68.116	Xenopus_tropicalis
ENSJJAG00000004828	-	86	92.857	ENSXCOG00000013860	snrpf	77	91.045	Xiphophorus_couchianus
ENSJJAG00000004828	-	86	92.857	ENSXMAG00000015448	snrpf	79	91.045	Xiphophorus_maculatus