EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000004913 (Gene tree)
Gene ID: 101604958
Gene Symbol: Upf2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 149630 bases
Position: chrJH725487.1:6550072-6699701
Accession: 101604958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002696	Upf2	PF04050.14	2.5e-32	1	1
ENSJJAP00000002696	MIF4G	PF02854.19	5.1e-76	1	3
ENSJJAP00000002696	MIF4G	PF02854.19	5.1e-76	2	3
ENSJJAP00000002696	MIF4G	PF02854.19	5.1e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000005579	-	5135	XM_004662373	ENSJJAP00000002696	1268 (aa)	XP_004662430	UPI0003333903

Gene Model

Click here to download ENSJJAG00000004913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000004913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000004913	Upf2	100	96.305	ENSG00000151461	UPF2	100	96.305	Homo_sapiens
ENSJJAG00000004913	Upf2	99	78.118	ENSAPOG00000015837	UPF2	100	75.432	Acanthochromis_polyacanthus
ENSJJAG00000004913	Upf2	100	96.696	ENSAMEG00000004586	UPF2	100	96.696	Ailuropoda_melanoleuca
ENSJJAG00000004913	Upf2	99	82.031	ENSACIG00000018078	UPF2	100	79.593	Amphilophus_citrinellus
ENSJJAG00000004913	Upf2	100	81.903	ENSAOCG00000016766	UPF2	100	79.469	Amphiprion_ocellaris
ENSJJAG00000004913	Upf2	100	81.981	ENSAPEG00000019084	UPF2	100	79.547	Amphiprion_percula
ENSJJAG00000004913	Upf2	100	81.946	ENSATEG00000021677	UPF2	99	79.517	Anabas_testudineus
ENSJJAG00000004913	Upf2	100	86.378	ENSAPLG00000010287	UPF2	90	90.949	Anas_platyrhynchos
ENSJJAG00000004913	Upf2	100	90.559	ENSACAG00000009259	UPF2	100	90.559	Anolis_carolinensis
ENSJJAG00000004913	Upf2	99	85.208	ENSANAG00000028451	UPF2	99	84.670	Aotus_nancymaae
ENSJJAG00000004913	Upf2	100	80.718	ENSACLG00000012696	UPF2	100	79.781	Astatotilapia_calliptera
ENSJJAG00000004913	Upf2	99	82.616	ENSAMXG00000013700	UPF2	99	82.616	Astyanax_mexicanus
ENSJJAG00000004913	Upf2	100	96.932	ENSBTAG00000000288	UPF2	100	96.932	Bos_taurus
ENSJJAG00000004913	Upf2	100	94.099	ENSCJAG00000020685	UPF2	100	95.047	Callithrix_jacchus
ENSJJAG00000004913	Upf2	100	97.010	ENSCAFG00000004839	UPF2	100	97.010	Canis_familiaris
ENSJJAG00000004913	Upf2	97	97.044	ENSCAFG00020005882	UPF2	100	96.939	Canis_lupus_dingo
ENSJJAG00000004913	Upf2	100	97.010	ENSCHIG00000020359	UPF2	100	97.010	Capra_hircus
ENSJJAG00000004913	Upf2	100	95.358	ENSTSYG00000000935	UPF2	100	95.358	Carlito_syrichta
ENSJJAG00000004913	Upf2	91	84.768	ENSCAPG00000016658	UPF2	95	85.198	Cavia_aperea
ENSJJAG00000004913	Upf2	99	92.704	ENSCPOG00000008809	UPF2	100	93.497	Cavia_porcellus
ENSJJAG00000004913	Upf2	100	89.378	ENSCCAG00000035991	UPF2	100	89.544	Cebus_capucinus
ENSJJAG00000004913	Upf2	100	96.462	ENSCATG00000032679	UPF2	100	96.462	Cercocebus_atys
ENSJJAG00000004913	Upf2	100	96.696	ENSCLAG00000011434	UPF2	100	96.696	Chinchilla_lanigera
ENSJJAG00000004913	Upf2	100	96.462	ENSCSAG00000013372	UPF2	100	96.462	Chlorocebus_sabaeus
ENSJJAG00000004913	Upf2	87	98.214	ENSCHOG00000000422	UPF2	89	98.214	Choloepus_hoffmanni
ENSJJAG00000004913	Upf2	99	91.325	ENSCPBG00000027823	UPF2	100	91.483	Chrysemys_picta_bellii
ENSJJAG00000004913	Upf2	79	49.264	ENSCSAVG00000007772	-	79	50.254	Ciona_savignyi
ENSJJAG00000004913	Upf2	99	89.601	ENSCANG00000040396	UPF2	100	90.551	Colobus_angolensis_palliatus
ENSJJAG00000004913	Upf2	100	97.323	ENSCGRG00001019347	Upf2	100	97.323	Cricetulus_griseus_chok1gshd
ENSJJAG00000004913	Upf2	100	97.323	ENSCGRG00000017993	Upf2	100	97.323	Cricetulus_griseus_crigri
ENSJJAG00000004913	Upf2	91	80.294	ENSCSEG00000003520	UPF2	91	79.931	Cynoglossus_semilaevis
ENSJJAG00000004913	Upf2	99	81.540	ENSCVAG00000006167	UPF2	100	78.931	Cyprinodon_variegatus
ENSJJAG00000004913	Upf2	100	96.696	ENSDNOG00000018160	UPF2	100	96.696	Dasypus_novemcinctus
ENSJJAG00000004913	Upf2	100	96.929	ENSDORG00000002478	Upf2	100	96.929	Dipodomys_ordii
ENSJJAG00000004913	Upf2	89	36.251	FBgn0029992	Upf2	90	39.149	Drosophila_melanogaster
ENSJJAG00000004913	Upf2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSJJAG00000004913	Upf2	69	68.507	ENSEBUG00000012448	-	87	71.141	Eptatretus_burgeri
ENSJJAG00000004913	Upf2	100	96.853	ENSEASG00005019274	UPF2	100	96.914	Equus_asinus_asinus
ENSJJAG00000004913	Upf2	100	96.932	ENSECAG00000017022	UPF2	100	96.932	Equus_caballus
ENSJJAG00000004913	Upf2	82	90.096	ENSEEUG00000007819	UPF2	82	90.096	Erinaceus_europaeus
ENSJJAG00000004913	Upf2	99	80.282	ENSELUG00000012014	UPF2	100	81.026	Esox_lucius
ENSJJAG00000004913	Upf2	100	96.685	ENSFCAG00000005785	UPF2	100	96.538	Felis_catus
ENSJJAG00000004913	Upf2	100	91.109	ENSFALG00000001889	UPF2	98	91.660	Ficedula_albicollis
ENSJJAG00000004913	Upf2	100	96.535	ENSFDAG00000014348	UPF2	100	96.535	Fukomys_damarensis
ENSJJAG00000004913	Upf2	99	81.775	ENSFHEG00000009826	UPF2	100	79.213	Fundulus_heteroclitus
ENSJJAG00000004913	Upf2	91	83.492	ENSGMOG00000005557	UPF2	100	78.471	Gadus_morhua
ENSJJAG00000004913	Upf2	100	91.588	ENSGALG00000033772	UPF2	100	92.374	Gallus_gallus
ENSJJAG00000004913	Upf2	100	78.923	ENSGAFG00000020867	UPF2	100	78.298	Gambusia_affinis
ENSJJAG00000004913	Upf2	91	83.910	ENSGACG00000001080	UPF2	100	81.626	Gasterosteus_aculeatus
ENSJJAG00000004913	Upf2	100	91.739	ENSGAGG00000002700	UPF2	100	91.896	Gopherus_agassizii
ENSJJAG00000004913	Upf2	100	96.305	ENSGGOG00000001479	UPF2	100	96.305	Gorilla_gorilla
ENSJJAG00000004913	Upf2	100	80.484	ENSHBUG00000004249	UPF2	100	79.750	Haplochromis_burtoni
ENSJJAG00000004913	Upf2	100	96.538	ENSHGLG00000015176	-	100	96.538	Heterocephalus_glaber_female
ENSJJAG00000004913	Upf2	99	85.568	ENSHGLG00000003822	-	99	84.700	Heterocephalus_glaber_female
ENSJJAG00000004913	Upf2	99	92.107	ENSHGLG00100010036	UPF2	94	92.894	Heterocephalus_glaber_male
ENSJJAG00000004913	Upf2	100	80.280	ENSHCOG00000004025	UPF2	99	77.838	Hippocampus_comes
ENSJJAG00000004913	Upf2	100	81.655	ENSIPUG00000015524	UPF2	100	81.655	Ictalurus_punctatus
ENSJJAG00000004913	Upf2	100	97.244	ENSSTOG00000013075	UPF2	100	97.244	Ictidomys_tridecemlineatus
ENSJJAG00000004913	Upf2	91	83.887	ENSKMAG00000001071	UPF2	100	78.997	Kryptolebias_marmoratus
ENSJJAG00000004913	Upf2	100	80.000	ENSLBEG00000016394	-	99	79.517	Labrus_bergylta
ENSJJAG00000004913	Upf2	80	80.236	ENSLBEG00000000728	-	93	78.958	Labrus_bergylta
ENSJJAG00000004913	Upf2	99	78.745	ENSLACG00000015945	UPF2	100	78.745	Latimeria_chalumnae
ENSJJAG00000004913	Upf2	99	83.609	ENSLOCG00000015698	UPF2	100	85.028	Lepisosteus_oculatus
ENSJJAG00000004913	Upf2	100	96.384	ENSMFAG00000043865	UPF2	100	96.384	Macaca_fascicularis
ENSJJAG00000004913	Upf2	100	96.384	ENSMMUG00000008241	UPF2	100	96.384	Macaca_mulatta
ENSJJAG00000004913	Upf2	81	95.902	ENSMNEG00000008062	UPF2	99	96.180	Macaca_nemestrina
ENSJJAG00000004913	Upf2	99	92.958	ENSMLEG00000036120	UPF2	100	95.652	Mandrillus_leucophaeus
ENSJJAG00000004913	Upf2	100	81.634	ENSMAMG00000018276	UPF2	100	81.323	Mastacembelus_armatus
ENSJJAG00000004913	Upf2	100	80.718	ENSMZEG00005021595	UPF2	100	79.781	Maylandia_zebra
ENSJJAG00000004913	Upf2	99	90.795	ENSMGAG00000004573	UPF2	99	91.581	Meleagris_gallopavo
ENSJJAG00000004913	Upf2	100	94.961	ENSMAUG00000016512	Upf2	100	94.961	Mesocricetus_auratus
ENSJJAG00000004913	Upf2	95	96.939	ENSMICG00000001716	UPF2	99	96.939	Microcebus_murinus
ENSJJAG00000004913	Upf2	100	96.378	ENSMOCG00000008263	Upf2	100	96.378	Microtus_ochrogaster
ENSJJAG00000004913	Upf2	90	82.825	ENSMMOG00000006528	UPF2	100	79.796	Mola_mola
ENSJJAG00000004913	Upf2	100	93.155	ENSMODG00000016794	UPF2	100	93.942	Monodelphis_domestica
ENSJJAG00000004913	Upf2	99	81.754	ENSMALG00000002663	UPF2	100	81.206	Monopterus_albus
ENSJJAG00000004913	Upf2	100	96.850	MGP_CAROLIEiJ_G0023157	Upf2	100	97.519	Mus_caroli
ENSJJAG00000004913	Upf2	100	96.850	ENSMUSG00000043241	Upf2	100	96.850	Mus_musculus
ENSJJAG00000004913	Upf2	100	96.693	MGP_PahariEiJ_G0019217	Upf2	100	96.693	Mus_pahari
ENSJJAG00000004913	Upf2	100	97.087	MGP_SPRETEiJ_G0024075	Upf2	100	97.087	Mus_spretus
ENSJJAG00000004913	Upf2	100	96.696	ENSMPUG00000001064	UPF2	100	96.696	Mustela_putorius_furo
ENSJJAG00000004913	Upf2	99	95.994	ENSMLUG00000000228	UPF2	100	95.994	Myotis_lucifugus
ENSJJAG00000004913	Upf2	100	80.640	ENSNBRG00000013629	UPF2	100	79.781	Neolamprologus_brichardi
ENSJJAG00000004913	Upf2	100	96.384	ENSNLEG00000012058	UPF2	100	96.384	Nomascus_leucogenys
ENSJJAG00000004913	Upf2	56	97.409	ENSMEUG00000002180	-	54	97.409	Notamacropus_eugenii
ENSJJAG00000004913	Upf2	77	100.000	ENSOPRG00000006801	-	77	100.000	Ochotona_princeps
ENSJJAG00000004913	Upf2	100	96.696	ENSODEG00000001290	UPF2	100	96.696	Octodon_degus
ENSJJAG00000004913	Upf2	100	80.718	ENSONIG00000017991	UPF2	100	79.859	Oreochromis_niloticus
ENSJJAG00000004913	Upf2	99	95.846	ENSOCUG00000006230	UPF2	100	95.846	Oryctolagus_cuniculus
ENSJJAG00000004913	Upf2	100	80.078	ENSORLG00000017189	UPF2	100	78.349	Oryzias_latipes
ENSJJAG00000004913	Upf2	100	80.233	ENSORLG00020005969	UPF2	100	80.856	Oryzias_latipes_hni
ENSJJAG00000004913	Upf2	100	80.078	ENSORLG00015005713	UPF2	100	78.349	Oryzias_latipes_hsok
ENSJJAG00000004913	Upf2	99	77.067	ENSOMEG00000023420	UPF2	98	75.488	Oryzias_melastigma
ENSJJAG00000004913	Upf2	100	96.617	ENSOGAG00000005796	UPF2	100	96.617	Otolemur_garnettii
ENSJJAG00000004913	Upf2	100	96.858	ENSOARG00000014587	UPF2	100	96.858	Ovis_aries
ENSJJAG00000004913	Upf2	99	92.175	ENSPPAG00000037953	UPF2	100	92.908	Pan_paniscus
ENSJJAG00000004913	Upf2	100	96.538	ENSPPRG00000000690	UPF2	100	96.538	Panthera_pardus
ENSJJAG00000004913	Upf2	100	96.538	ENSPTIG00000008867	UPF2	100	96.538	Panthera_tigris_altaica
ENSJJAG00000004913	Upf2	100	96.305	ENSPTRG00000002291	UPF2	100	96.305	Pan_troglodytes
ENSJJAG00000004913	Upf2	100	96.384	ENSPANG00000023399	UPF2	100	96.384	Papio_anubis
ENSJJAG00000004913	Upf2	100	79.251	ENSPKIG00000025502	UPF2	100	79.563	Paramormyrops_kingsleyae
ENSJJAG00000004913	Upf2	59	90.969	ENSPSIG00000015158	UPF2	95	90.969	Pelodiscus_sinensis
ENSJJAG00000004913	Upf2	99	78.836	ENSPMGG00000005259	UPF2	100	77.394	Periophthalmus_magnuspinnatus
ENSJJAG00000004913	Upf2	93	96.210	ENSPEMG00000015731	Upf2	99	96.210	Peromyscus_maniculatus_bairdii
ENSJJAG00000004913	Upf2	100	92.998	ENSPCIG00000006656	UPF2	100	93.784	Phascolarctos_cinereus
ENSJJAG00000004913	Upf2	100	79.034	ENSPFOG00000017118	UPF2	100	78.689	Poecilia_formosa
ENSJJAG00000004913	Upf2	100	79.034	ENSPLAG00000005094	UPF2	100	78.689	Poecilia_latipinna
ENSJJAG00000004913	Upf2	100	79.034	ENSPMEG00000017009	UPF2	100	78.689	Poecilia_mexicana
ENSJJAG00000004913	Upf2	99	78.700	ENSPREG00000021880	UPF2	100	78.795	Poecilia_reticulata
ENSJJAG00000004913	Upf2	66	97.608	ENSPPYG00000002089	-	100	97.608	Pongo_abelii
ENSJJAG00000004913	Upf2	90	85.950	ENSPCAG00000000684	UPF2	90	85.950	Procavia_capensis
ENSJJAG00000004913	Upf2	99	93.691	ENSPCOG00000021656	UPF2	100	93.770	Propithecus_coquereli
ENSJJAG00000004913	Upf2	100	88.365	ENSPVAG00000017286	UPF2	100	88.522	Pteropus_vampyrus
ENSJJAG00000004913	Upf2	99	78.186	ENSPNYG00000017096	UPF2	100	77.326	Pundamilia_nyererei
ENSJJAG00000004913	Upf2	100	82.982	ENSPNAG00000009357	UPF2	100	82.904	Pygocentrus_nattereri
ENSJJAG00000004913	Upf2	99	90.966	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSJJAG00000004913	Upf2	99	95.817	ENSRBIG00000037780	UPF2	100	95.817	Rhinopithecus_bieti
ENSJJAG00000004913	Upf2	100	96.459	ENSRROG00000043547	UPF2	100	96.459	Rhinopithecus_roxellana
ENSJJAG00000004913	Upf2	100	94.961	ENSSBOG00000020012	UPF2	100	95.437	Saimiri_boliviensis_boliviensis
ENSJJAG00000004913	Upf2	100	79.329	ENSSFOG00015023788	upf2	100	81.556	Scleropages_formosus
ENSJJAG00000004913	Upf2	90	82.134	ENSSMAG00000007637	UPF2	100	78.173	Scophthalmus_maximus
ENSJJAG00000004913	Upf2	100	81.981	ENSSDUG00000017244	UPF2	99	79.547	Seriola_dumerili
ENSJJAG00000004913	Upf2	99	80.784	ENSSLDG00000016866	UPF2	82	80.709	Seriola_lalandi_dorsalis
ENSJJAG00000004913	Upf2	100	93.863	ENSSARG00000008615	UPF2	100	93.863	Sorex_araneus
ENSJJAG00000004913	Upf2	99	88.898	ENSSPUG00000014544	UPF2	99	88.819	Sphenodon_punctatus
ENSJJAG00000004913	Upf2	68	97.699	ENSSSCG00000011117	-	100	97.699	Sus_scrofa
ENSJJAG00000004913	Upf2	99	91.404	ENSTGUG00000002163	-	100	91.404	Taeniopygia_guttata
ENSJJAG00000004913	Upf2	100	81.591	ENSTRUG00000007519	UPF2	99	79.235	Takifugu_rubripes
ENSJJAG00000004913	Upf2	100	79.361	ENSTNIG00000004453	UPF2	94	83.191	Tetraodon_nigroviridis
ENSJJAG00000004913	Upf2	93	88.898	ENSTBEG00000012679	UPF2	93	89.237	Tupaia_belangeri
ENSJJAG00000004913	Upf2	100	96.617	ENSTTRG00000016388	UPF2	100	96.617	Tursiops_truncatus
ENSJJAG00000004913	Upf2	95	96.783	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSJJAG00000004913	Upf2	100	96.853	ENSUMAG00000012953	UPF2	95	96.853	Ursus_maritimus
ENSJJAG00000004913	Upf2	83	96.774	ENSVPAG00000006763	UPF2	83	96.774	Vicugna_pacos
ENSJJAG00000004913	Upf2	100	96.932	ENSVVUG00000006166	UPF2	100	96.932	Vulpes_vulpes
ENSJJAG00000004913	Upf2	100	83.137	ENSXETG00000033103	UPF2	91	88.754	Xenopus_tropicalis
ENSJJAG00000004913	Upf2	99	78.298	ENSXCOG00000011604	UPF2	100	78.421	Xiphophorus_couchianus
ENSJJAG00000004913	Upf2	100	78.722	ENSXMAG00000017209	UPF2	100	78.376	Xiphophorus_maculatus