EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000005140 (Gene tree)
Gene ID: 101613731
Gene Symbol: Ttc21a
Alias: 4921538N17Rik|Thm2
Full Name: tetratricopeptide repeat domain 21A
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 54368 bases
Position: chrJH725484.1:12178726-12233093
Accession: 101613731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002866	PPR	PF01535.20	9.1e-07	1	1
ENSJJAP00000002862	PPR	PF01535.20	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000005984	-	3948	XM_004662106	ENSJJAP00000002862	1315 (aa)	XP_004662163	UPI00033344D0
ENSJJAT00000005995	-	3936	-	ENSJJAP00000002866	1311 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000005140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000005140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000005140	Ttc21a	55	81.267	ENSBTAG00000010477	TTC21A	100	81.267	Bos_taurus
ENSJJAG00000005140	Ttc21a	55	81.405	ENSCHIG00000018055	TTC21A	100	81.405	Capra_hircus
ENSJJAG00000005140	Ttc21a	99	82.555	ENSCGRG00001020151	Ttc21a	100	82.555	Cricetulus_griseus_chok1gshd
ENSJJAG00000005140	Ttc21a	99	82.555	ENSCGRG00000012945	Ttc21a	95	82.555	Cricetulus_griseus_crigri
ENSJJAG00000005140	Ttc21a	99	68.220	ENSDORG00000027538	Ttc21a	100	68.241	Dipodomys_ordii
ENSJJAG00000005140	Ttc21a	87	74.868	ENSETEG00000018753	TTC21A	87	74.868	Echinops_telfairi
ENSJJAG00000005140	Ttc21a	100	82.738	ENSMUSG00000032514	Ttc21a	100	82.738	Mus_musculus
ENSJJAG00000005140	Ttc21a	100	82.738	MGP_PahariEiJ_G0015676	Ttc21a	100	82.738	Mus_pahari
ENSJJAG00000005140	Ttc21a	100	82.814	MGP_SPRETEiJ_G0033957	Ttc21a	100	82.814	Mus_spretus
ENSJJAG00000005140	Ttc21a	100	75.817	ENSPPRG00000012924	TTC21A	100	75.817	Panthera_pardus
ENSJJAG00000005140	Ttc21a	99	83.831	ENSPEMG00000010809	Ttc21a	99	83.831	Peromyscus_maniculatus_bairdii
ENSJJAG00000005140	Ttc21a	100	83.042	ENSRNOG00000034089	Ttc21a	100	83.042	Rattus_norvegicus
ENSJJAG00000005140	Ttc21a	100	76.730	ENSUAMG00000020073	TTC21A	99	83.074	Ursus_americanus