EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000005424 (Gene tree)
Gene ID: 101594544
Gene Symbol: Prdm12
Alias: LOC381359
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 22624 bases
Position: chrJH725612.1:486944-509567
Accession: 101594544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000002935	zf-C2H2	PF00096.26	5.7e-13	1	2
ENSJJAP00000002935	zf-C2H2	PF00096.26	5.7e-13	2	2
ENSJJAP00000002944	zf-C2H2	PF00096.26	1.3e-12	1	2
ENSJJAP00000002944	zf-C2H2	PF00096.26	1.3e-12	2	2
ENSJJAP00000002935	zf-met	PF12874.7	5.1e-08	1	1
ENSJJAP00000002944	zf-met	PF12874.7	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000006214	-	1257	-	ENSJJAP00000002944	418 (aa)	-	-
ENSJJAT00000006182	-	1164	XM_012952004	ENSJJAP00000002935	330 (aa)	XP_012807458	-

Gene Model

Click here to download ENSJJAG00000005424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000005424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000005424	Prdm12	67	47.273	ENSJJAG00000011464	Prdm5	96	47.273
ENSJJAG00000005424	Prdm12	51	37.333	ENSJJAG00000013954	Zfp64	63	40.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000005424	Prdm12	100	98.182	ENSG00000130711	PRDM12	90	98.182	Homo_sapiens
ENSJJAG00000005424	Prdm12	98	68.000	ENSAPOG00000018234	-	93	66.570	Acanthochromis_polyacanthus
ENSJJAG00000005424	Prdm12	98	80.580	ENSAPOG00000016051	prdm12b	91	80.172	Acanthochromis_polyacanthus
ENSJJAG00000005424	Prdm12	98	94.427	ENSAMEG00000016234	PRDM12	99	94.427	Ailuropoda_melanoleuca
ENSJJAG00000005424	Prdm12	98	80.290	ENSACIG00000005193	-	91	80.000	Amphilophus_citrinellus
ENSJJAG00000005424	Prdm12	99	80.233	ENSACIG00000019578	prdm12b	91	80.758	Amphilophus_citrinellus
ENSJJAG00000005424	Prdm12	98	82.111	ENSAOCG00000015040	prdm12b	90	82.111	Amphiprion_ocellaris
ENSJJAG00000005424	Prdm12	98	82.840	ENSAPEG00000015092	prdm12b	90	82.840	Amphiprion_percula
ENSJJAG00000005424	Prdm12	98	79.464	ENSAPEG00000022849	-	87	79.762	Amphiprion_percula
ENSJJAG00000005424	Prdm12	98	82.067	ENSATEG00000014595	-	96	82.067	Anabas_testudineus
ENSJJAG00000005424	Prdm12	100	98.485	ENSANAG00000020616	PRDM12	97	98.485	Aotus_nancymaae
ENSJJAG00000005424	Prdm12	98	81.579	ENSACLG00000007631	-	87	81.579	Astatotilapia_calliptera
ENSJJAG00000005424	Prdm12	99	83.082	ENSACLG00000011876	prdm12b	91	83.082	Astatotilapia_calliptera
ENSJJAG00000005424	Prdm12	99	88.623	ENSAMXG00000033665	prdm12b	90	89.189	Astyanax_mexicanus
ENSJJAG00000005424	Prdm12	99	84.049	ENSAMXG00000008540	PRDM12	90	84.049	Astyanax_mexicanus
ENSJJAG00000005424	Prdm12	100	98.788	ENSBTAG00000023797	PRDM12	91	98.788	Bos_taurus
ENSJJAG00000005424	Prdm12	100	98.485	ENSCJAG00000020540	PRDM12	92	98.485	Callithrix_jacchus
ENSJJAG00000005424	Prdm12	87	97.909	ENSCAFG00000023076	PRDM12	89	97.909	Canis_familiaris
ENSJJAG00000005424	Prdm12	100	99.091	ENSCAFG00020024046	PRDM12	91	99.091	Canis_lupus_dingo
ENSJJAG00000005424	Prdm12	100	99.091	ENSCHIG00000025005	PRDM12	91	99.091	Capra_hircus
ENSJJAG00000005424	Prdm12	95	99.042	ENSCPOG00000005901	PRDM12	95	99.042	Cavia_porcellus
ENSJJAG00000005424	Prdm12	100	98.485	ENSCCAG00000037485	PRDM12	91	98.485	Cebus_capucinus
ENSJJAG00000005424	Prdm12	100	98.485	ENSCATG00000020327	PRDM12	91	98.485	Cercocebus_atys
ENSJJAG00000005424	Prdm12	100	99.091	ENSCLAG00000005499	PRDM12	90	99.091	Chinchilla_lanigera
ENSJJAG00000005424	Prdm12	100	98.485	ENSCSAG00000014756	PRDM12	91	98.485	Chlorocebus_sabaeus
ENSJJAG00000005424	Prdm12	100	93.333	ENSCPBG00000022628	PRDM12	93	93.333	Chrysemys_picta_bellii
ENSJJAG00000005424	Prdm12	100	99.394	ENSCGRG00001015005	Prdm12	90	99.394	Cricetulus_griseus_chok1gshd
ENSJJAG00000005424	Prdm12	99	77.778	ENSCVAG00000000944	-	90	77.778	Cyprinodon_variegatus
ENSJJAG00000005424	Prdm12	99	82.249	ENSCVAG00000017166	prdm12b	90	82.934	Cyprinodon_variegatus
ENSJJAG00000005424	Prdm12	98	88.146	ENSDARG00000007430	prdm12b	91	87.349	Danio_rerio
ENSJJAG00000005424	Prdm12	99	98.182	ENSDNOG00000042302	PRDM12	91	98.182	Dasypus_novemcinctus
ENSJJAG00000005424	Prdm12	98	62.963	ENSEBUG00000016780	prdm12b	78	64.387	Eptatretus_burgeri
ENSJJAG00000005424	Prdm12	100	99.091	ENSEASG00005008472	PRDM12	91	99.091	Equus_asinus_asinus
ENSJJAG00000005424	Prdm12	100	98.788	ENSECAG00000005933	PRDM12	91	98.788	Equus_caballus
ENSJJAG00000005424	Prdm12	98	83.951	ENSELUG00000013674	PRDM12	89	83.951	Esox_lucius
ENSJJAG00000005424	Prdm12	99	85.714	ENSELUG00000009905	prdm12b	91	85.714	Esox_lucius
ENSJJAG00000005424	Prdm12	100	99.091	ENSFCAG00000043086	PRDM12	91	99.091	Felis_catus
ENSJJAG00000005424	Prdm12	100	93.333	ENSFALG00000001445	PRDM12	83	93.333	Ficedula_albicollis
ENSJJAG00000005424	Prdm12	98	80.588	ENSFHEG00000007746	-	88	80.882	Fundulus_heteroclitus
ENSJJAG00000005424	Prdm12	98	82.493	ENSFHEG00000003944	prdm12b	90	82.789	Fundulus_heteroclitus
ENSJJAG00000005424	Prdm12	98	83.587	ENSGMOG00000011797	prdm12b	93	82.979	Gadus_morhua
ENSJJAG00000005424	Prdm12	100	93.333	ENSGALG00000003895	PRDM12	93	93.333	Gallus_gallus
ENSJJAG00000005424	Prdm12	99	83.036	ENSGAFG00000010827	prdm12b	90	83.036	Gambusia_affinis
ENSJJAG00000005424	Prdm12	99	83.728	ENSGACG00000016713	prdm12b	91	83.728	Gasterosteus_aculeatus
ENSJJAG00000005424	Prdm12	100	93.636	ENSGAGG00000014083	PRDM12	93	93.636	Gopherus_agassizii
ENSJJAG00000005424	Prdm12	100	97.879	ENSGGOG00000010568	PRDM12	90	97.879	Gorilla_gorilla
ENSJJAG00000005424	Prdm12	98	81.579	ENSHBUG00000022537	-	80	81.579	Haplochromis_burtoni
ENSJJAG00000005424	Prdm12	99	81.287	ENSHBUG00000022878	prdm12b	91	81.287	Haplochromis_burtoni
ENSJJAG00000005424	Prdm12	100	99.091	ENSHGLG00000013939	PRDM12	90	99.091	Heterocephalus_glaber_female
ENSJJAG00000005424	Prdm12	99	76.716	ENSHCOG00000021167	-	99	73.729	Hippocampus_comes
ENSJJAG00000005424	Prdm12	98	80.994	ENSHCOG00000003663	prdm12b	88	80.636	Hippocampus_comes
ENSJJAG00000005424	Prdm12	99	87.126	ENSIPUG00000017053	prdm12b	91	87.126	Ictalurus_punctatus
ENSJJAG00000005424	Prdm12	98	82.622	ENSIPUG00000019544	PRDM12	90	82.622	Ictalurus_punctatus
ENSJJAG00000005424	Prdm12	100	99.697	ENSSTOG00000005986	PRDM12	86	99.697	Ictidomys_tridecemlineatus
ENSJJAG00000005424	Prdm12	99	78.492	ENSKMAG00000016921	prdm12b	89	78.492	Kryptolebias_marmoratus
ENSJJAG00000005424	Prdm12	97	81.651	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSJJAG00000005424	Prdm12	98	83.832	ENSLBEG00000017769	prdm12b	88	83.832	Labrus_bergylta
ENSJJAG00000005424	Prdm12	98	81.009	ENSLBEG00000007776	-	89	81.306	Labrus_bergylta
ENSJJAG00000005424	Prdm12	99	90.274	ENSLACG00000017560	PRDM12	93	90.274	Latimeria_chalumnae
ENSJJAG00000005424	Prdm12	98	88.037	ENSLOCG00000005429	prdm12b	90	88.344	Lepisosteus_oculatus
ENSJJAG00000005424	Prdm12	100	97.321	ENSLAFG00000006979	PRDM12	90	97.321	Loxodonta_africana
ENSJJAG00000005424	Prdm12	100	98.485	ENSMFAG00000040322	PRDM12	90	98.485	Macaca_fascicularis
ENSJJAG00000005424	Prdm12	100	98.485	ENSMNEG00000037234	PRDM12	91	98.485	Macaca_nemestrina
ENSJJAG00000005424	Prdm12	98	81.250	ENSMAMG00000018988	-	86	81.548	Mastacembelus_armatus
ENSJJAG00000005424	Prdm12	99	82.405	ENSMAMG00000013212	prdm12b	91	82.941	Mastacembelus_armatus
ENSJJAG00000005424	Prdm12	98	81.579	ENSMZEG00005000415	PRDM12	86	81.579	Maylandia_zebra
ENSJJAG00000005424	Prdm12	100	93.333	ENSMGAG00000005438	PRDM12	93	93.333	Meleagris_gallopavo
ENSJJAG00000005424	Prdm12	100	99.091	ENSMAUG00000013040	Prdm12	90	99.091	Mesocricetus_auratus
ENSJJAG00000005424	Prdm12	100	99.091	ENSMICG00000015480	PRDM12	91	99.091	Microcebus_murinus
ENSJJAG00000005424	Prdm12	100	99.091	ENSMOCG00000021026	Prdm12	90	99.091	Microtus_ochrogaster
ENSJJAG00000005424	Prdm12	100	95.455	ENSMODG00000012108	PRDM12	93	95.455	Monodelphis_domestica
ENSJJAG00000005424	Prdm12	98	70.871	ENSMALG00000021901	prdm12b	88	70.871	Monopterus_albus
ENSJJAG00000005424	Prdm12	100	99.091	MGP_CAROLIEiJ_G0023414	Prdm12	90	99.091	Mus_caroli
ENSJJAG00000005424	Prdm12	100	99.091	ENSMUSG00000079466	Prdm12	90	99.091	Mus_musculus
ENSJJAG00000005424	Prdm12	100	99.091	MGP_PahariEiJ_G0024871	Prdm12	90	99.091	Mus_pahari
ENSJJAG00000005424	Prdm12	100	99.091	MGP_SPRETEiJ_G0024331	Prdm12	90	99.091	Mus_spretus
ENSJJAG00000005424	Prdm12	100	98.788	ENSNGAG00000018480	Prdm12	94	98.788	Nannospalax_galili
ENSJJAG00000005424	Prdm12	99	76.471	ENSNBRG00000024312	-	95	76.765	Neolamprologus_brichardi
ENSJJAG00000005424	Prdm12	99	80.580	ENSNBRG00000006727	prdm12b	91	80.580	Neolamprologus_brichardi
ENSJJAG00000005424	Prdm12	100	84.242	ENSMEUG00000003828	PRDM12	93	84.242	Notamacropus_eugenii
ENSJJAG00000005424	Prdm12	100	97.879	ENSOPRG00000008680	PRDM12	100	97.879	Ochotona_princeps
ENSJJAG00000005424	Prdm12	100	99.697	ENSODEG00000016282	PRDM12	62	99.697	Octodon_degus
ENSJJAG00000005424	Prdm12	58	97.409	ENSOANG00000001043	PRDM12	89	97.409	Ornithorhynchus_anatinus
ENSJJAG00000005424	Prdm12	92	93.770	ENSOCUG00000008241	PRDM12	98	93.791	Oryctolagus_cuniculus
ENSJJAG00000005424	Prdm12	98	79.765	ENSORLG00000017558	-	87	80.059	Oryzias_latipes
ENSJJAG00000005424	Prdm12	100	80.980	ENSORLG00000007114	prdm12b	92	80.980	Oryzias_latipes
ENSJJAG00000005424	Prdm12	98	79.532	ENSORLG00020013167	-	87	79.825	Oryzias_latipes_hni
ENSJJAG00000005424	Prdm12	100	80.692	ENSORLG00020019565	prdm12b	91	80.692	Oryzias_latipes_hni
ENSJJAG00000005424	Prdm12	98	79.765	ENSORLG00015003435	-	87	80.059	Oryzias_latipes_hsok
ENSJJAG00000005424	Prdm12	100	80.403	ENSORLG00015007621	prdm12b	92	80.747	Oryzias_latipes_hsok
ENSJJAG00000005424	Prdm12	100	80.286	ENSOMEG00000004134	prdm12b	91	81.268	Oryzias_melastigma
ENSJJAG00000005424	Prdm12	99	78.348	ENSOMEG00000007762	-	94	78.348	Oryzias_melastigma
ENSJJAG00000005424	Prdm12	100	99.091	ENSOGAG00000007557	PRDM12	99	99.091	Otolemur_garnettii
ENSJJAG00000005424	Prdm12	89	95.904	ENSPPAG00000031506	-	99	95.904	Pan_paniscus
ENSJJAG00000005424	Prdm12	100	90.030	ENSPPRG00000023024	PRDM12	85	90.030	Panthera_pardus
ENSJJAG00000005424	Prdm12	100	98.182	ENSPTRG00000021475	PRDM12	90	98.182	Pan_troglodytes
ENSJJAG00000005424	Prdm12	100	98.182	ENSPTRG00000043324	-	90	98.182	Pan_troglodytes
ENSJJAG00000005424	Prdm12	100	98.485	ENSPANG00000025967	PRDM12	91	98.485	Papio_anubis
ENSJJAG00000005424	Prdm12	98	80.240	ENSPKIG00000004305	PRDM12	96	79.179	Paramormyrops_kingsleyae
ENSJJAG00000005424	Prdm12	99	85.841	ENSPKIG00000007228	prdm12b	92	85.044	Paramormyrops_kingsleyae
ENSJJAG00000005424	Prdm12	100	93.333	ENSPSIG00000006739	PRDM12	93	93.333	Pelodiscus_sinensis
ENSJJAG00000005424	Prdm12	99	83.136	ENSPMGG00000008867	prdm12b	91	83.136	Periophthalmus_magnuspinnatus
ENSJJAG00000005424	Prdm12	99	81.269	ENSPMGG00000002356	-	86	81.269	Periophthalmus_magnuspinnatus
ENSJJAG00000005424	Prdm12	100	99.394	ENSPEMG00000009969	Prdm12	91	99.394	Peromyscus_maniculatus_bairdii
ENSJJAG00000005424	Prdm12	100	95.758	ENSPCIG00000024119	PRDM12	93	95.758	Phascolarctos_cinereus
ENSJJAG00000005424	Prdm12	99	82.647	ENSPFOG00000019841	prdm12b	92	82.647	Poecilia_formosa
ENSJJAG00000005424	Prdm12	99	83.333	ENSPLAG00000016626	prdm12b	89	83.333	Poecilia_latipinna
ENSJJAG00000005424	Prdm12	97	82.822	ENSPMEG00000016698	prdm12b	89	82.822	Poecilia_mexicana
ENSJJAG00000005424	Prdm12	99	83.186	ENSPREG00000015073	prdm12b	89	83.186	Poecilia_reticulata
ENSJJAG00000005424	Prdm12	96	77.982	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSJJAG00000005424	Prdm12	100	98.182	ENSPPYG00000019694	PRDM12	94	98.182	Pongo_abelii
ENSJJAG00000005424	Prdm12	100	99.091	ENSPCOG00000022255	PRDM12	90	99.091	Propithecus_coquereli
ENSJJAG00000005424	Prdm12	100	98.788	ENSPVAG00000001511	PRDM12	90	98.788	Pteropus_vampyrus
ENSJJAG00000005424	Prdm12	98	81.579	ENSPNYG00000013589	-	86	81.579	Pundamilia_nyererei
ENSJJAG00000005424	Prdm12	99	80.523	ENSPNYG00000009607	prdm12b	91	80.523	Pundamilia_nyererei
ENSJJAG00000005424	Prdm12	99	88.922	ENSPNAG00000024532	prdm12b	91	88.922	Pygocentrus_nattereri
ENSJJAG00000005424	Prdm12	98	80.909	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSJJAG00000005424	Prdm12	100	99.091	ENSRNOG00000009218	Prdm12	90	99.091	Rattus_norvegicus
ENSJJAG00000005424	Prdm12	99	96.049	ENSRBIG00000042712	PRDM12	91	96.049	Rhinopithecus_bieti
ENSJJAG00000005424	Prdm12	97	98.442	ENSRROG00000043554	PRDM12	100	98.442	Rhinopithecus_roxellana
ENSJJAG00000005424	Prdm12	100	94.864	ENSSHAG00000015972	PRDM12	93	94.864	Sarcophilus_harrisii
ENSJJAG00000005424	Prdm12	99	79.772	ENSSMAG00000003754	prdm12b	90	80.057	Scophthalmus_maximus
ENSJJAG00000005424	Prdm12	98	83.486	ENSSDUG00000019071	-	90	83.792	Seriola_dumerili
ENSJJAG00000005424	Prdm12	98	81.214	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSJJAG00000005424	Prdm12	98	84.049	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSJJAG00000005424	Prdm12	98	81.633	ENSSLDG00000009557	prdm12b	90	81.633	Seriola_lalandi_dorsalis
ENSJJAG00000005424	Prdm12	100	93.030	ENSSPUG00000013424	PRDM12	93	93.030	Sphenodon_punctatus
ENSJJAG00000005424	Prdm12	98	72.566	ENSSPAG00000022420	-	87	74.462	Stegastes_partitus
ENSJJAG00000005424	Prdm12	98	81.871	ENSSPAG00000018824	prdm12b	90	82.164	Stegastes_partitus
ENSJJAG00000005424	Prdm12	100	99.091	ENSSSCG00000005703	PRDM12	91	99.091	Sus_scrofa
ENSJJAG00000005424	Prdm12	98	84.036	ENSTRUG00000018659	prdm12b	90	84.036	Takifugu_rubripes
ENSJJAG00000005424	Prdm12	98	81.024	ENSTRUG00000013239	-	93	81.024	Takifugu_rubripes
ENSJJAG00000005424	Prdm12	98	80.606	ENSTNIG00000005859	-	92	80.606	Tetraodon_nigroviridis
ENSJJAG00000005424	Prdm12	99	83.976	ENSTNIG00000009020	prdm12b	89	84.685	Tetraodon_nigroviridis
ENSJJAG00000005424	Prdm12	100	99.091	ENSUAMG00000009653	PRDM12	91	99.091	Ursus_americanus
ENSJJAG00000005424	Prdm12	100	99.091	ENSVVUG00000027662	PRDM12	79	99.091	Vulpes_vulpes
ENSJJAG00000005424	Prdm12	99	83.036	ENSXCOG00000002836	prdm12b	90	83.036	Xiphophorus_couchianus
ENSJJAG00000005424	Prdm12	99	80.294	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus
ENSJJAG00000005424	Prdm12	99	82.544	ENSXMAG00000005537	prdm12b	89	83.234	Xiphophorus_maculatus