EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000006433 (Gene tree)
Gene ID: 101609506
Gene Symbol: Pabpn1l
Alias: LOC382035|ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 3928 bases
Position: chrJH725523.1:9033445-9037372
Accession: 101609506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000003327	RRM_1	PF00076.22	2.1e-16	1	1
ENSJJAP00000003326	RRM_1	PF00076.22	2.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000007327	-	816	XM_004666073	ENSJJAP00000003327	271 (aa)	XP_004666130	UPI0003333844
ENSJJAT00000007323	-	861	-	ENSJJAP00000003326	286 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000006433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000006433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000006433	Pabpn1l	52	57.143	ENSJJAG00000023507	Gm20521	80	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000006433	Pabpn1l	100	66.308	ENSG00000205022	PABPN1L	100	67.857	Homo_sapiens
ENSJJAG00000006433	Pabpn1l	68	48.663	ENSAPOG00000000685	PABPN1L	58	48.663	Acanthochromis_polyacanthus
ENSJJAG00000006433	Pabpn1l	57	55.000	ENSACIG00000021400	PABPN1L	87	55.000	Amphilophus_citrinellus
ENSJJAG00000006433	Pabpn1l	58	50.314	ENSAOCG00000019844	PABPN1L	75	46.939	Amphiprion_ocellaris
ENSJJAG00000006433	Pabpn1l	58	50.314	ENSAPEG00000019534	PABPN1L	75	46.939	Amphiprion_percula
ENSJJAG00000006433	Pabpn1l	66	50.000	ENSATEG00000011646	PABPN1L	72	50.000	Anabas_testudineus
ENSJJAG00000006433	Pabpn1l	70	56.500	ENSACAG00000013250	PABPN1L	99	56.500	Anolis_carolinensis
ENSJJAG00000006433	Pabpn1l	100	65.343	ENSANAG00000038178	PABPN1L	100	66.187	Aotus_nancymaae
ENSJJAG00000006433	Pabpn1l	73	46.569	ENSACLG00000025147	PABPN1L	73	49.485	Astatotilapia_calliptera
ENSJJAG00000006433	Pabpn1l	54	55.172	ENSAMXG00000010873	PABPN1L	58	55.629	Astyanax_mexicanus
ENSJJAG00000006433	Pabpn1l	61	69.512	ENSBTAG00000006727	-	99	70.122	Bos_taurus
ENSJJAG00000006433	Pabpn1l	100	61.649	ENSBTAG00000023752	-	100	64.158	Bos_taurus
ENSJJAG00000006433	Pabpn1l	100	65.704	ENSCJAG00000045284	PABPN1L	100	66.906	Callithrix_jacchus
ENSJJAG00000006433	Pabpn1l	100	58.947	ENSCHIG00000013987	PABPN1L	100	58.947	Capra_hircus
ENSJJAG00000006433	Pabpn1l	94	63.806	ENSCAPG00000007240	PABPN1L	100	63.433	Cavia_aperea
ENSJJAG00000006433	Pabpn1l	100	65.091	ENSCPOG00000025951	PABPN1L	100	66.182	Cavia_porcellus
ENSJJAG00000006433	Pabpn1l	100	67.148	ENSCCAG00000027631	PABPN1L	100	69.424	Cebus_capucinus
ENSJJAG00000006433	Pabpn1l	100	68.478	ENSCATG00000031060	PABPN1L	100	70.397	Cercocebus_atys
ENSJJAG00000006433	Pabpn1l	100	66.182	ENSCLAG00000000704	PABPN1L	100	67.636	Chinchilla_lanigera
ENSJJAG00000006433	Pabpn1l	100	65.529	ENSCSAG00000002881	PABPN1L	100	66.212	Chlorocebus_sabaeus
ENSJJAG00000006433	Pabpn1l	70	57.071	ENSCPBG00000023441	PABPN1L	61	57.789	Chrysemys_picta_bellii
ENSJJAG00000006433	Pabpn1l	100	66.426	ENSCANG00000039336	PABPN1L	100	67.986	Colobus_angolensis_palliatus
ENSJJAG00000006433	Pabpn1l	100	74.638	ENSCGRG00001013211	Pabpn1l	100	75.000	Cricetulus_griseus_chok1gshd
ENSJJAG00000006433	Pabpn1l	100	74.638	ENSCGRG00000015868	Pabpn1l	100	75.000	Cricetulus_griseus_crigri
ENSJJAG00000006433	Pabpn1l	63	49.123	ENSCSEG00000001142	pabpn1l	75	48.341	Cynoglossus_semilaevis
ENSJJAG00000006433	Pabpn1l	58	52.830	ENSCVAG00000015547	PABPN1L	74	50.515	Cyprinodon_variegatus
ENSJJAG00000006433	Pabpn1l	100	54.643	ENSDNOG00000034677	PABPN1L	100	57.447	Dasypus_novemcinctus
ENSJJAG00000006433	Pabpn1l	100	68.592	ENSEASG00005000777	PABPN1L	100	68.592	Equus_asinus_asinus
ENSJJAG00000006433	Pabpn1l	100	68.592	ENSECAG00000000378	PABPN1L	100	68.592	Equus_caballus
ENSJJAG00000006433	Pabpn1l	100	59.041	ENSEEUG00000004747	PABPN1L	100	59.041	Erinaceus_europaeus
ENSJJAG00000006433	Pabpn1l	54	56.164	ENSELUG00000018385	PABPN1L	64	52.353	Esox_lucius
ENSJJAG00000006433	Pabpn1l	100	67.025	ENSFCAG00000010465	PABPN1L	100	68.459	Felis_catus
ENSJJAG00000006433	Pabpn1l	74	55.340	ENSFALG00000003319	PABPN1L	82	55.340	Ficedula_albicollis
ENSJJAG00000006433	Pabpn1l	100	65.455	ENSFDAG00000021067	PABPN1L	100	67.273	Fukomys_damarensis
ENSJJAG00000006433	Pabpn1l	58	51.266	ENSFHEG00000018295	PABPN1L	74	51.031	Fundulus_heteroclitus
ENSJJAG00000006433	Pabpn1l	54	51.656	ENSGMOG00000001475	PABPN1L	69	49.180	Gadus_morhua
ENSJJAG00000006433	Pabpn1l	59	60.494	ENSGALG00000006242	PABPN1L	92	60.494	Gallus_gallus
ENSJJAG00000006433	Pabpn1l	58	53.459	ENSGAFG00000012565	PABPN1L	74	51.031	Gambusia_affinis
ENSJJAG00000006433	Pabpn1l	58	50.307	ENSGACG00000015428	PABPN1L	73	47.317	Gasterosteus_aculeatus
ENSJJAG00000006433	Pabpn1l	66	57.222	ENSGAGG00000010613	PABPN1L	61	57.143	Gopherus_agassizii
ENSJJAG00000006433	Pabpn1l	100	67.029	ENSGGOG00000012670	PABPN1L	100	69.314	Gorilla_gorilla
ENSJJAG00000006433	Pabpn1l	73	46.569	ENSHBUG00000002388	PABPN1L	73	48.168	Haplochromis_burtoni
ENSJJAG00000006433	Pabpn1l	94	66.923	ENSHGLG00000014207	PABPN1L	99	67.308	Heterocephalus_glaber_female
ENSJJAG00000006433	Pabpn1l	94	66.923	ENSHGLG00100005230	PABPN1L	99	67.308	Heterocephalus_glaber_male
ENSJJAG00000006433	Pabpn1l	61	48.837	ENSHCOG00000004151	PABPN1L	75	47.170	Hippocampus_comes
ENSJJAG00000006433	Pabpn1l	100	66.786	ENSSTOG00000020814	PABPN1L	100	66.786	Ictidomys_tridecemlineatus
ENSJJAG00000006433	Pabpn1l	63	48.256	ENSLBEG00000011647	PABPN1L	73	45.972	Labrus_bergylta
ENSJJAG00000006433	Pabpn1l	70	67.876	ENSLAFG00000025902	-	79	67.172	Loxodonta_africana
ENSJJAG00000006433	Pabpn1l	100	68.841	ENSMFAG00000002924	PABPN1L	100	70.758	Macaca_fascicularis
ENSJJAG00000006433	Pabpn1l	100	68.000	ENSMMUG00000012438	PABPN1L	100	69.928	Macaca_mulatta
ENSJJAG00000006433	Pabpn1l	100	68.116	ENSMNEG00000044808	PABPN1L	100	70.036	Macaca_nemestrina
ENSJJAG00000006433	Pabpn1l	100	67.754	ENSMLEG00000032667	PABPN1L	100	69.675	Mandrillus_leucophaeus
ENSJJAG00000006433	Pabpn1l	73	46.569	ENSMZEG00005002186	PABPN1L	73	49.485	Maylandia_zebra
ENSJJAG00000006433	Pabpn1l	100	72.000	ENSMAUG00000014032	Pabpn1l	100	72.364	Mesocricetus_auratus
ENSJJAG00000006433	Pabpn1l	100	68.592	ENSMICG00000028179	PABPN1L	100	69.675	Microcebus_murinus
ENSJJAG00000006433	Pabpn1l	100	71.636	ENSMOCG00000007955	Pabpn1l	100	71.636	Microtus_ochrogaster
ENSJJAG00000006433	Pabpn1l	100	52.330	ENSMODG00000003873	-	100	52.330	Monodelphis_domestica
ENSJJAG00000006433	Pabpn1l	63	49.412	ENSMALG00000016926	PABPN1L	71	45.685	Monopterus_albus
ENSJJAG00000006433	Pabpn1l	100	69.455	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	69.455	Mus_caroli
ENSJJAG00000006433	Pabpn1l	100	68.727	ENSMUSG00000069867	Pabpn1l	100	68.727	Mus_musculus
ENSJJAG00000006433	Pabpn1l	100	69.091	MGP_PahariEiJ_G0023268	Pabpn1l	100	69.091	Mus_pahari
ENSJJAG00000006433	Pabpn1l	100	68.727	MGP_SPRETEiJ_G0032788	Pabpn1l	100	68.727	Mus_spretus
ENSJJAG00000006433	Pabpn1l	96	50.181	ENSMLUG00000003228	PABPN1L	95	50.181	Myotis_lucifugus
ENSJJAG00000006433	Pabpn1l	100	76.727	ENSNGAG00000023992	Pabpn1l	100	76.727	Nannospalax_galili
ENSJJAG00000006433	Pabpn1l	63	48.864	ENSNBRG00000017078	PABPN1L	74	48.864	Neolamprologus_brichardi
ENSJJAG00000006433	Pabpn1l	100	71.377	ENSOPRG00000005597	PABPN1L	100	71.377	Ochotona_princeps
ENSJJAG00000006433	Pabpn1l	100	60.208	ENSODEG00000004649	PABPN1L	100	60.208	Octodon_degus
ENSJJAG00000006433	Pabpn1l	100	53.069	ENSOANG00000013901	PABPN1L	100	53.285	Ornithorhynchus_anatinus
ENSJJAG00000006433	Pabpn1l	69	49.215	ENSORLG00000026560	PABPN1L	73	49.215	Oryzias_latipes
ENSJJAG00000006433	Pabpn1l	69	49.215	ENSORLG00020015068	PABPN1L	73	49.215	Oryzias_latipes_hni
ENSJJAG00000006433	Pabpn1l	69	49.215	ENSORLG00015000397	PABPN1L	73	49.215	Oryzias_latipes_hsok
ENSJJAG00000006433	Pabpn1l	74	47.317	ENSOMEG00000017896	PABPN1L	55	47.317	Oryzias_melastigma
ENSJJAG00000006433	Pabpn1l	100	67.148	ENSOGAG00000000433	PABPN1L	100	67.870	Otolemur_garnettii
ENSJJAG00000006433	Pabpn1l	100	60.000	ENSOARG00000013682	PABPN1L	100	62.623	Ovis_aries
ENSJJAG00000006433	Pabpn1l	100	67.384	ENSPPAG00000028866	PABPN1L	100	68.571	Pan_paniscus
ENSJJAG00000006433	Pabpn1l	100	66.667	ENSPPRG00000015106	PABPN1L	100	68.100	Panthera_pardus
ENSJJAG00000006433	Pabpn1l	91	63.710	ENSPTIG00000015606	PABPN1L	98	63.710	Panthera_tigris_altaica
ENSJJAG00000006433	Pabpn1l	100	67.384	ENSPTRG00000031120	PABPN1L	100	68.571	Pan_troglodytes
ENSJJAG00000006433	Pabpn1l	100	67.391	ENSPANG00000026039	PABPN1L	100	69.314	Papio_anubis
ENSJJAG00000006433	Pabpn1l	70	52.709	ENSPSIG00000003404	PABPN1L	100	53.140	Pelodiscus_sinensis
ENSJJAG00000006433	Pabpn1l	55	52.229	ENSPMGG00000013927	PABPN1L	74	53.901	Periophthalmus_magnuspinnatus
ENSJJAG00000006433	Pabpn1l	100	72.000	ENSPEMG00000016624	Pabpn1l	100	72.000	Peromyscus_maniculatus_bairdii
ENSJJAG00000006433	Pabpn1l	53	63.265	ENSPCIG00000007038	-	99	63.265	Phascolarctos_cinereus
ENSJJAG00000006433	Pabpn1l	58	53.459	ENSPFOG00000007001	PABPN1L	91	43.231	Poecilia_formosa
ENSJJAG00000006433	Pabpn1l	58	53.459	ENSPLAG00000018431	PABPN1L	74	51.031	Poecilia_latipinna
ENSJJAG00000006433	Pabpn1l	58	53.459	ENSPMEG00000009108	PABPN1L	74	51.031	Poecilia_mexicana
ENSJJAG00000006433	Pabpn1l	100	67.384	ENSPPYG00000007655	PABPN1L	100	69.286	Pongo_abelii
ENSJJAG00000006433	Pabpn1l	100	67.029	ENSPCOG00000024077	PABPN1L	100	68.116	Propithecus_coquereli
ENSJJAG00000006433	Pabpn1l	100	65.480	ENSPVAG00000002716	PABPN1L	100	65.480	Pteropus_vampyrus
ENSJJAG00000006433	Pabpn1l	73	46.569	ENSPNYG00000004803	PABPN1L	73	49.485	Pundamilia_nyererei
ENSJJAG00000006433	Pabpn1l	100	72.364	ENSRNOG00000029558	Pabpn1l	100	72.364	Rattus_norvegicus
ENSJJAG00000006433	Pabpn1l	100	68.478	ENSRBIG00000030740	PABPN1L	100	70.397	Rhinopithecus_bieti
ENSJJAG00000006433	Pabpn1l	99	67.273	ENSRROG00000035483	-	99	69.565	Rhinopithecus_roxellana
ENSJJAG00000006433	Pabpn1l	100	68.116	ENSRROG00000032240	-	100	69.675	Rhinopithecus_roxellana
ENSJJAG00000006433	Pabpn1l	100	67.509	ENSSBOG00000018410	PABPN1L	100	70.144	Saimiri_boliviensis_boliviensis
ENSJJAG00000006433	Pabpn1l	100	48.621	ENSSHAG00000010001	-	100	48.485	Sarcophilus_harrisii
ENSJJAG00000006433	Pabpn1l	59	50.943	ENSSMAG00000021348	PABPN1L	73	47.475	Scophthalmus_maximus
ENSJJAG00000006433	Pabpn1l	63	47.674	ENSSDUG00000006986	PABPN1L	73	47.396	Seriola_dumerili
ENSJJAG00000006433	Pabpn1l	63	48.256	ENSSLDG00000021845	PABPN1L	73	47.917	Seriola_lalandi_dorsalis
ENSJJAG00000006433	Pabpn1l	87	55.508	ENSSARG00000005178	-	95	55.508	Sorex_araneus
ENSJJAG00000006433	Pabpn1l	70	57.368	ENSSPUG00000007031	PABPN1L	86	57.436	Sphenodon_punctatus
ENSJJAG00000006433	Pabpn1l	73	46.341	ENSSPAG00000017978	PABPN1L	73	47.917	Stegastes_partitus
ENSJJAG00000006433	Pabpn1l	100	64.388	ENSSSCG00000036367	PABPN1L	100	67.754	Sus_scrofa
ENSJJAG00000006433	Pabpn1l	58	50.610	ENSTRUG00000024725	PABPN1L	81	47.475	Takifugu_rubripes
ENSJJAG00000006433	Pabpn1l	100	62.590	ENSTTRG00000004691	PABPN1L	100	65.827	Tursiops_truncatus
ENSJJAG00000006433	Pabpn1l	56	53.704	ENSXETG00000011258	pabpn1l	96	49.309	Xenopus_tropicalis