EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000006750 (Gene tree)
Gene ID: 101609679
Gene Symbol: Lig4
Alias: 5830471N16Rik|DNA ligase IV|tiny
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrJH725497.1:9732336-9735071
Accession: 101609679
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000003439	RNA_ligase	PF09414.10	9.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000007645	-	2736	XM_004663402	ENSJJAP00000003439	911 (aa)	XP_004663459	UPI0003330021

Gene Model

Click here to download ENSJJAG00000006750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000006750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000006750	Lig4	100	87.816	ENSG00000174405	LIG4	100	87.816	Homo_sapiens
ENSJJAG00000006750	Lig4	99	65.165	ENSAPOG00000000866	lig4	99	65.495	Acanthochromis_polyacanthus
ENSJJAG00000006750	Lig4	100	85.840	ENSAMEG00000019685	LIG4	99	85.840	Ailuropoda_melanoleuca
ENSJJAG00000006750	Lig4	99	65.457	ENSACIG00000018309	lig4	99	65.787	Amphilophus_citrinellus
ENSJJAG00000006750	Lig4	99	64.945	ENSAOCG00000011768	lig4	99	65.275	Amphiprion_ocellaris
ENSJJAG00000006750	Lig4	99	65.055	ENSAPEG00000017815	lig4	99	65.385	Amphiprion_percula
ENSJJAG00000006750	Lig4	99	64.648	ENSATEG00000005583	lig4	99	64.868	Anabas_testudineus
ENSJJAG00000006750	Lig4	97	72.955	ENSAPLG00000001673	LIG4	99	72.955	Anas_platyrhynchos
ENSJJAG00000006750	Lig4	99	74.144	ENSACAG00000014566	LIG4	99	74.144	Anolis_carolinensis
ENSJJAG00000006750	Lig4	100	86.937	ENSANAG00000012446	LIG4	100	86.937	Aotus_nancymaae
ENSJJAG00000006750	Lig4	99	64.770	ENSACLG00000027051	lig4	99	65.203	Astatotilapia_calliptera
ENSJJAG00000006750	Lig4	99	63.646	ENSAMXG00000008192	lig4	93	63.646	Astyanax_mexicanus
ENSJJAG00000006750	Lig4	100	86.389	ENSBTAG00000015868	LIG4	100	86.389	Bos_taurus
ENSJJAG00000006750	Lig4	100	86.169	ENSCJAG00000014689	LIG4	100	86.169	Callithrix_jacchus
ENSJJAG00000006750	Lig4	100	86.279	ENSCAFG00000006031	LIG4	100	86.279	Canis_familiaris
ENSJJAG00000006750	Lig4	100	86.279	ENSCAFG00020021230	LIG4	100	86.279	Canis_lupus_dingo
ENSJJAG00000006750	Lig4	100	85.730	ENSCHIG00000001019	LIG4	100	85.730	Capra_hircus
ENSJJAG00000006750	Lig4	99	85.161	ENSCAPG00000006284	LIG4	99	85.161	Cavia_aperea
ENSJJAG00000006750	Lig4	100	85.071	ENSCPOG00000014266	LIG4	100	85.071	Cavia_porcellus
ENSJJAG00000006750	Lig4	100	85.840	ENSCCAG00000019971	LIG4	100	85.840	Cebus_capucinus
ENSJJAG00000006750	Lig4	100	87.816	ENSCATG00000021075	LIG4	100	87.816	Cercocebus_atys
ENSJJAG00000006750	Lig4	100	86.279	ENSCLAG00000003376	LIG4	100	86.279	Chinchilla_lanigera
ENSJJAG00000006750	Lig4	100	87.706	ENSCSAG00000000211	LIG4	100	87.706	Chlorocebus_sabaeus
ENSJJAG00000006750	Lig4	99	78.146	ENSCPBG00000023291	LIG4	99	77.741	Chrysemys_picta_bellii
ENSJJAG00000006750	Lig4	68	45.325	ENSCING00000009536	-	95	45.280	Ciona_intestinalis
ENSJJAG00000006750	Lig4	83	45.801	ENSCSAVG00000010336	-	98	45.801	Ciona_savignyi
ENSJJAG00000006750	Lig4	100	87.925	ENSCANG00000005805	LIG4	100	87.925	Colobus_angolensis_palliatus
ENSJJAG00000006750	Lig4	100	88.158	ENSCGRG00001012072	Lig4	100	88.158	Cricetulus_griseus_chok1gshd
ENSJJAG00000006750	Lig4	100	88.158	ENSCGRG00000013417	Lig4	100	88.158	Cricetulus_griseus_crigri
ENSJJAG00000006750	Lig4	97	65.909	ENSCSEG00000013905	lig4	95	65.909	Cynoglossus_semilaevis
ENSJJAG00000006750	Lig4	99	65.342	ENSCVAG00000007896	lig4	99	65.342	Cyprinodon_variegatus
ENSJJAG00000006750	Lig4	99	63.969	ENSDARG00000060620	lig4	98	63.969	Danio_rerio
ENSJJAG00000006750	Lig4	100	84.978	ENSDNOG00000000513	LIG4	100	84.978	Dasypus_novemcinctus
ENSJJAG00000006750	Lig4	100	86.608	ENSDORG00000027303	Lig4	100	86.608	Dipodomys_ordii
ENSJJAG00000006750	Lig4	89	31.818	FBgn0030506	Lig4	91	31.972	Drosophila_melanogaster
ENSJJAG00000006750	Lig4	99	80.820	ENSETEG00000015563	LIG4	100	80.820	Echinops_telfairi
ENSJJAG00000006750	Lig4	99	43.386	ENSEBUG00000014243	lig4	99	43.022	Eptatretus_burgeri
ENSJJAG00000006750	Lig4	100	87.377	ENSEASG00005022073	LIG4	100	87.377	Equus_asinus_asinus
ENSJJAG00000006750	Lig4	100	86.937	ENSECAG00000003257	LIG4	100	86.937	Equus_caballus
ENSJJAG00000006750	Lig4	99	65.419	ENSELUG00000006787	lig4	99	65.308	Esox_lucius
ENSJJAG00000006750	Lig4	100	85.840	ENSFCAG00000031985	LIG4	100	85.840	Felis_catus
ENSJJAG00000006750	Lig4	89	74.047	ENSFALG00000004214	LIG4	98	74.047	Ficedula_albicollis
ENSJJAG00000006750	Lig4	100	86.498	ENSFDAG00000008973	LIG4	100	86.498	Fukomys_damarensis
ENSJJAG00000006750	Lig4	99	64.758	ENSFHEG00000007398	lig4	90	64.758	Fundulus_heteroclitus
ENSJJAG00000006750	Lig4	85	64.570	ENSGMOG00000012843	lig4	99	64.570	Gadus_morhua
ENSJJAG00000006750	Lig4	100	72.380	ENSGALG00000016854	LIG4	100	72.380	Gallus_gallus
ENSJJAG00000006750	Lig4	99	64.811	ENSGAFG00000019779	lig4	95	64.466	Gambusia_affinis
ENSJJAG00000006750	Lig4	99	63.123	ENSGACG00000014135	lig4	99	63.355	Gasterosteus_aculeatus
ENSJJAG00000006750	Lig4	100	87.706	ENSGGOG00000027771	LIG4	100	87.706	Gorilla_gorilla
ENSJJAG00000006750	Lig4	99	64.551	ENSHBUG00000006245	lig4	99	64.984	Haplochromis_burtoni
ENSJJAG00000006750	Lig4	100	87.377	ENSHGLG00000000718	LIG4	100	87.377	Heterocephalus_glaber_female
ENSJJAG00000006750	Lig4	100	87.377	ENSHGLG00100003265	LIG4	100	87.377	Heterocephalus_glaber_male
ENSJJAG00000006750	Lig4	99	63.516	ENSHCOG00000012010	lig4	99	63.516	Hippocampus_comes
ENSJJAG00000006750	Lig4	99	63.816	ENSIPUG00000013748	lig4	99	64.026	Ictalurus_punctatus
ENSJJAG00000006750	Lig4	100	87.377	ENSSTOG00000024303	LIG4	100	87.377	Ictidomys_tridecemlineatus
ENSJJAG00000006750	Lig4	99	66.113	ENSKMAG00000001149	lig4	99	66.113	Kryptolebias_marmoratus
ENSJJAG00000006750	Lig4	91	64.699	ENSLBEG00000014578	lig4	99	65.060	Labrus_bergylta
ENSJJAG00000006750	Lig4	99	71.145	ENSLACG00000003282	LIG4	99	71.145	Latimeria_chalumnae
ENSJJAG00000006750	Lig4	99	68.681	ENSLOCG00000008901	lig4	98	68.681	Lepisosteus_oculatus
ENSJJAG00000006750	Lig4	100	84.447	ENSLAFG00000031152	LIG4	100	84.228	Loxodonta_africana
ENSJJAG00000006750	Lig4	100	87.925	ENSMFAG00000037235	LIG4	100	87.925	Macaca_fascicularis
ENSJJAG00000006750	Lig4	100	87.816	ENSMMUG00000008874	LIG4	100	87.816	Macaca_mulatta
ENSJJAG00000006750	Lig4	100	87.925	ENSMNEG00000023575	LIG4	100	87.925	Macaca_nemestrina
ENSJJAG00000006750	Lig4	100	87.486	ENSMLEG00000026720	LIG4	100	87.486	Mandrillus_leucophaeus
ENSJJAG00000006750	Lig4	99	64.835	ENSMAMG00000008472	lig4	99	65.165	Mastacembelus_armatus
ENSJJAG00000006750	Lig4	99	64.770	ENSMZEG00005001855	lig4	99	65.203	Maylandia_zebra
ENSJJAG00000006750	Lig4	100	73.362	ENSMGAG00000015532	LIG4	100	73.362	Meleagris_gallopavo
ENSJJAG00000006750	Lig4	100	85.840	ENSMOCG00000019000	Lig4	100	85.840	Microtus_ochrogaster
ENSJJAG00000006750	Lig4	99	63.787	ENSMMOG00000004390	lig4	99	63.787	Mola_mola
ENSJJAG00000006750	Lig4	100	80.132	ENSMODG00000025064	LIG4	100	80.132	Monodelphis_domestica
ENSJJAG00000006750	Lig4	99	64.673	ENSMALG00000008555	lig4	99	64.673	Monopterus_albus
ENSJJAG00000006750	Lig4	100	86.937	MGP_CAROLIEiJ_G0030809	Lig4	100	86.937	Mus_caroli
ENSJJAG00000006750	Lig4	100	86.608	ENSMUSG00000049717	Lig4	100	86.608	Mus_musculus
ENSJJAG00000006750	Lig4	100	86.718	MGP_PahariEiJ_G0021270	Lig4	100	86.718	Mus_pahari
ENSJJAG00000006750	Lig4	100	86.389	MGP_SPRETEiJ_G0031917	Lig4	100	86.389	Mus_spretus
ENSJJAG00000006750	Lig4	100	85.620	ENSMPUG00000018675	LIG4	100	85.620	Mustela_putorius_furo
ENSJJAG00000006750	Lig4	100	86.059	ENSMLUG00000001267	LIG4	100	86.059	Myotis_lucifugus
ENSJJAG00000006750	Lig4	100	89.352	ENSNGAG00000013258	Lig4	100	89.352	Nannospalax_galili
ENSJJAG00000006750	Lig4	99	64.693	ENSNBRG00000021252	lig4	99	65.127	Neolamprologus_brichardi
ENSJJAG00000006750	Lig4	100	87.377	ENSNLEG00000007888	LIG4	100	87.377	Nomascus_leucogenys
ENSJJAG00000006750	Lig4	100	85.510	ENSOPRG00000005765	LIG4	100	85.510	Ochotona_princeps
ENSJJAG00000006750	Lig4	100	84.742	ENSODEG00000019683	LIG4	100	84.742	Octodon_degus
ENSJJAG00000006750	Lig4	99	64.764	ENSONIG00000011969	lig4	98	65.093	Oreochromis_niloticus
ENSJJAG00000006750	Lig4	100	87.157	ENSOCUG00000015734	LIG4	100	87.157	Oryctolagus_cuniculus
ENSJJAG00000006750	Lig4	99	63.816	ENSORLG00000004041	lig4	99	63.706	Oryzias_latipes
ENSJJAG00000006750	Lig4	99	64.254	ENSORLG00020019607	lig4	99	64.145	Oryzias_latipes_hni
ENSJJAG00000006750	Lig4	99	63.925	ENSORLG00015017754	lig4	99	63.816	Oryzias_latipes_hsok
ENSJJAG00000006750	Lig4	74	69.912	ENSOMEG00000003459	lig4	98	69.912	Oryzias_melastigma
ENSJJAG00000006750	Lig4	100	86.184	ENSOGAG00000032120	LIG4	99	86.184	Otolemur_garnettii
ENSJJAG00000006750	Lig4	82	86.980	ENSOARG00000005590	LIG4	98	86.980	Ovis_aries
ENSJJAG00000006750	Lig4	100	87.377	ENSPPAG00000032998	LIG4	100	87.377	Pan_paniscus
ENSJJAG00000006750	Lig4	100	86.169	ENSPPRG00000017804	LIG4	100	86.169	Panthera_pardus
ENSJJAG00000006750	Lig4	100	86.169	ENSPTIG00000010051	LIG4	100	86.169	Panthera_tigris_altaica
ENSJJAG00000006750	Lig4	100	87.486	ENSPTRG00000006025	LIG4	100	87.486	Pan_troglodytes
ENSJJAG00000006750	Lig4	100	87.816	ENSPANG00000007562	LIG4	100	87.816	Papio_anubis
ENSJJAG00000006750	Lig4	99	66.154	ENSPKIG00000011645	lig4	98	66.154	Paramormyrops_kingsleyae
ENSJJAG00000006750	Lig4	99	77.033	ENSPSIG00000001504	LIG4	99	77.033	Pelodiscus_sinensis
ENSJJAG00000006750	Lig4	99	62.222	ENSPMGG00000013486	lig4	99	61.910	Periophthalmus_magnuspinnatus
ENSJJAG00000006750	Lig4	100	88.048	ENSPEMG00000000076	Lig4	100	88.048	Peromyscus_maniculatus_bairdii
ENSJJAG00000006750	Lig4	100	80.263	ENSPCIG00000021882	LIG4	100	79.693	Phascolarctos_cinereus
ENSJJAG00000006750	Lig4	99	64.739	ENSPFOG00000000797	lig4	99	64.396	Poecilia_formosa
ENSJJAG00000006750	Lig4	99	64.627	ENSPLAG00000001196	lig4	99	64.286	Poecilia_latipinna
ENSJJAG00000006750	Lig4	99	64.739	ENSPMEG00000021353	lig4	99	64.396	Poecilia_mexicana
ENSJJAG00000006750	Lig4	99	64.294	ENSPREG00000007323	lig4	99	63.956	Poecilia_reticulata
ENSJJAG00000006750	Lig4	100	87.377	ENSPPYG00000005540	LIG4	100	87.377	Pongo_abelii
ENSJJAG00000006750	Lig4	100	86.389	ENSPVAG00000016403	LIG4	100	86.389	Pteropus_vampyrus
ENSJJAG00000006750	Lig4	99	64.661	ENSPNYG00000009660	lig4	99	65.093	Pundamilia_nyererei
ENSJJAG00000006750	Lig4	100	64.074	ENSPNAG00000028069	LIG4	100	64.074	Pygocentrus_nattereri
ENSJJAG00000006750	Lig4	100	64.074	ENSPNAG00000028056	lig4	100	64.074	Pygocentrus_nattereri
ENSJJAG00000006750	Lig4	100	86.279	ENSRNOG00000014605	Lig4	100	86.279	Rattus_norvegicus
ENSJJAG00000006750	Lig4	100	86.498	ENSRBIG00000039962	LIG4	100	86.498	Rhinopithecus_bieti
ENSJJAG00000006750	Lig4	100	87.706	ENSRROG00000006040	LIG4	100	87.706	Rhinopithecus_roxellana
ENSJJAG00000006750	Lig4	100	86.279	ENSSBOG00000019029	LIG4	100	86.279	Saimiri_boliviensis_boliviensis
ENSJJAG00000006750	Lig4	100	77.961	ENSSHAG00000009525	LIG4	100	77.412	Sarcophilus_harrisii
ENSJJAG00000006750	Lig4	100	65.611	ENSSFOG00015012835	lig4	100	65.611	Scleropages_formosus
ENSJJAG00000006750	Lig4	99	62.680	ENSSMAG00000011267	lig4	99	62.680	Scophthalmus_maximus
ENSJJAG00000006750	Lig4	99	65.743	ENSSDUG00000010343	lig4	98	65.743	Seriola_dumerili
ENSJJAG00000006750	Lig4	99	63.846	ENSSLDG00000003239	lig4	99	63.846	Seriola_lalandi_dorsalis
ENSJJAG00000006750	Lig4	100	81.947	ENSSARG00000006573	LIG4	100	81.947	Sorex_araneus
ENSJJAG00000006750	Lig4	93	76.185	ENSSPUG00000002444	LIG4	100	76.185	Sphenodon_punctatus
ENSJJAG00000006750	Lig4	99	64.945	ENSSPAG00000001609	lig4	99	64.945	Stegastes_partitus
ENSJJAG00000006750	Lig4	99	85.919	ENSSSCG00000009540	LIG4	99	85.919	Sus_scrofa
ENSJJAG00000006750	Lig4	99	73.009	ENSTGUG00000010795	LIG4	99	73.009	Taeniopygia_guttata
ENSJJAG00000006750	Lig4	99	64.427	ENSTRUG00000009984	lig4	99	64.427	Takifugu_rubripes
ENSJJAG00000006750	Lig4	99	65.055	ENSTNIG00000010348	lig4	99	65.275	Tetraodon_nigroviridis
ENSJJAG00000006750	Lig4	100	87.706	ENSTBEG00000017741	LIG4	100	87.706	Tupaia_belangeri
ENSJJAG00000006750	Lig4	100	86.828	ENSTTRG00000012660	LIG4	100	86.828	Tursiops_truncatus
ENSJJAG00000006750	Lig4	100	85.950	ENSUAMG00000003773	LIG4	100	85.950	Ursus_americanus
ENSJJAG00000006750	Lig4	99	70.374	ENSXETG00000002654	lig4	99	70.374	Xenopus_tropicalis
ENSJJAG00000006750	Lig4	99	64.516	ENSXCOG00000017401	lig4	99	64.176	Xiphophorus_couchianus
ENSJJAG00000006750	Lig4	99	64.667	ENSXMAG00000015142	lig4	99	64.325	Xiphophorus_maculatus