EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000007365 (Gene tree)
Gene ID: 101602295
Gene Symbol: Tsen54
Alias: 0610034P02Rik
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 8797 bases
Position: chrJH725452.1:15839666-15848462
Accession: 101602295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000003718	tRNA_int_end_N2	PF12928.7	7.4e-19	1	1
ENSJJAP00000003713	tRNA_int_end_N2	PF12928.7	8.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000008446	-	1581	XM_004655680	ENSJJAP00000003713	526 (aa)	XP_004655737	UPI000333245F
ENSJJAT00000008451	-	1464	-	ENSJJAP00000003718	487 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000007365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000007365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000007365	Tsen54	100	81.629	ENSG00000182173	TSEN54	99	90.141	Homo_sapiens
ENSJJAG00000007365	Tsen54	97	47.961	ENSAPOG00000009659	tsen54	99	45.349	Acanthochromis_polyacanthus
ENSJJAG00000007365	Tsen54	99	78.008	ENSAMEG00000009414	TSEN54	99	78.383	Ailuropoda_melanoleuca
ENSJJAG00000007365	Tsen54	97	48.560	ENSAOCG00000000152	tsen54	95	48.560	Amphiprion_ocellaris
ENSJJAG00000007365	Tsen54	97	48.062	ENSAPEG00000018931	tsen54	94	47.793	Amphiprion_percula
ENSJJAG00000007365	Tsen54	97	45.698	ENSATEG00000019860	tsen54	97	45.889	Anabas_testudineus
ENSJJAG00000007365	Tsen54	86	52.700	ENSAPLG00000009419	TSEN54	100	52.700	Anas_platyrhynchos
ENSJJAG00000007365	Tsen54	99	53.371	ENSACAG00000006714	TSEN54	99	53.371	Anolis_carolinensis
ENSJJAG00000007365	Tsen54	99	81.958	ENSANAG00000024061	TSEN54	99	82.163	Aotus_nancymaae
ENSJJAG00000007365	Tsen54	97	45.665	ENSACLG00000019800	tsen54	96	45.665	Astatotilapia_calliptera
ENSJJAG00000007365	Tsen54	97	48.054	ENSAMXG00000006546	tsen54	96	48.054	Astyanax_mexicanus
ENSJJAG00000007365	Tsen54	100	79.284	ENSBTAG00000000824	TSEN54	100	79.065	Bos_taurus
ENSJJAG00000007365	Tsen54	99	81.190	ENSCJAG00000014278	TSEN54	99	81.404	Callithrix_jacchus
ENSJJAG00000007365	Tsen54	100	81.051	ENSCAFG00000004798	TSEN54	100	81.614	Canis_familiaris
ENSJJAG00000007365	Tsen54	100	81.051	ENSCAFG00020000312	TSEN54	100	81.614	Canis_lupus_dingo
ENSJJAG00000007365	Tsen54	100	80.266	ENSCHIG00000019908	TSEN54	100	80.266	Capra_hircus
ENSJJAG00000007365	Tsen54	86	78.118	ENSTSYG00000037439	TSEN54	100	78.775	Carlito_syrichta
ENSJJAG00000007365	Tsen54	99	81.190	ENSCCAG00000036624	TSEN54	99	81.025	Cebus_capucinus
ENSJJAG00000007365	Tsen54	97	81.712	ENSCATG00000042877	TSEN54	99	81.784	Cercocebus_atys
ENSJJAG00000007365	Tsen54	97	82.700	ENSCLAG00000002924	TSEN54	99	82.546	Chinchilla_lanigera
ENSJJAG00000007365	Tsen54	100	81.250	ENSCSAG00000004809	TSEN54	100	81.629	Chlorocebus_sabaeus
ENSJJAG00000007365	Tsen54	99	56.238	ENSCPBG00000028071	TSEN54	99	56.238	Chrysemys_picta_bellii
ENSJJAG00000007365	Tsen54	100	81.061	ENSCANG00000028053	TSEN54	100	81.061	Colobus_angolensis_palliatus
ENSJJAG00000007365	Tsen54	100	85.389	ENSCGRG00001020029	Tsen54	100	85.389	Cricetulus_griseus_chok1gshd
ENSJJAG00000007365	Tsen54	84	83.559	ENSCGRG00000016289	Tsen54	100	83.559	Cricetulus_griseus_crigri
ENSJJAG00000007365	Tsen54	80	39.261	ENSCSEG00000020586	tsen54	99	39.261	Cynoglossus_semilaevis
ENSJJAG00000007365	Tsen54	80	45.070	ENSDARG00000036844	tsen54	99	45.775	Danio_rerio
ENSJJAG00000007365	Tsen54	100	75.047	ENSDNOG00000018452	TSEN54	100	77.486	Dasypus_novemcinctus
ENSJJAG00000007365	Tsen54	100	83.302	ENSDORG00000004073	Tsen54	100	83.302	Dipodomys_ordii
ENSJJAG00000007365	Tsen54	97	36.038	ENSEBUG00000005203	TSEN54	95	36.038	Eptatretus_burgeri
ENSJJAG00000007365	Tsen54	100	82.519	ENSEASG00005000579	TSEN54	100	82.519	Equus_asinus_asinus
ENSJJAG00000007365	Tsen54	100	82.895	ENSECAG00000004924	TSEN54	100	82.895	Equus_caballus
ENSJJAG00000007365	Tsen54	86	75.817	ENSEEUG00000008467	TSEN54	100	76.035	Erinaceus_europaeus
ENSJJAG00000007365	Tsen54	98	44.727	ENSELUG00000017703	tsen54	91	44.727	Esox_lucius
ENSJJAG00000007365	Tsen54	100	80.488	ENSFCAG00000023712	TSEN54	100	81.051	Felis_catus
ENSJJAG00000007365	Tsen54	94	54.600	ENSFALG00000001119	TSEN54	97	53.551	Ficedula_albicollis
ENSJJAG00000007365	Tsen54	86	81.898	ENSFDAG00000019090	TSEN54	99	81.898	Fukomys_damarensis
ENSJJAG00000007365	Tsen54	97	46.332	ENSFHEG00000005470	tsen54	96	46.525	Fundulus_heteroclitus
ENSJJAG00000007365	Tsen54	78	46.471	ENSGMOG00000013146	tsen54	95	47.059	Gadus_morhua
ENSJJAG00000007365	Tsen54	95	50.098	ENSGALG00000047163	TSEN54	98	50.098	Gallus_gallus
ENSJJAG00000007365	Tsen54	99	46.455	ENSGAFG00000005111	tsen54	99	46.852	Gambusia_affinis
ENSJJAG00000007365	Tsen54	96	43.050	ENSGACG00000014987	tsen54	99	43.243	Gasterosteus_aculeatus
ENSJJAG00000007365	Tsen54	100	56.642	ENSGAGG00000006825	TSEN54	99	56.642	Gopherus_agassizii
ENSJJAG00000007365	Tsen54	97	81.176	ENSGGOG00000009417	TSEN54	100	81.569	Gorilla_gorilla
ENSJJAG00000007365	Tsen54	87	44.043	ENSHBUG00000018296	tsen54	99	38.568	Haplochromis_burtoni
ENSJJAG00000007365	Tsen54	100	84.250	ENSHGLG00000007979	TSEN54	100	84.250	Heterocephalus_glaber_female
ENSJJAG00000007365	Tsen54	100	83.302	ENSHGLG00100005497	TSEN54	100	83.302	Heterocephalus_glaber_male
ENSJJAG00000007365	Tsen54	80	43.590	ENSHCOG00000007481	tsen54	99	43.357	Hippocampus_comes
ENSJJAG00000007365	Tsen54	99	42.697	ENSIPUG00000000590	tsen54	98	42.697	Ictalurus_punctatus
ENSJJAG00000007365	Tsen54	100	77.989	ENSSTOG00000012883	TSEN54	100	77.989	Ictidomys_tridecemlineatus
ENSJJAG00000007365	Tsen54	97	46.355	ENSKMAG00000006944	tsen54	97	46.355	Kryptolebias_marmoratus
ENSJJAG00000007365	Tsen54	97	44.841	ENSLBEG00000004199	tsen54	97	45.028	Labrus_bergylta
ENSJJAG00000007365	Tsen54	97	46.970	ENSLACG00000009497	TSEN54	100	46.970	Latimeria_chalumnae
ENSJJAG00000007365	Tsen54	97	47.932	ENSLOCG00000011191	tsen54	97	48.030	Lepisosteus_oculatus
ENSJJAG00000007365	Tsen54	100	73.546	ENSLAFG00000011655	TSEN54	100	73.734	Loxodonta_africana
ENSJJAG00000007365	Tsen54	100	81.439	ENSMFAG00000000712	TSEN54	100	81.818	Macaca_fascicularis
ENSJJAG00000007365	Tsen54	100	81.250	ENSMNEG00000029199	TSEN54	100	81.629	Macaca_nemestrina
ENSJJAG00000007365	Tsen54	86	79.956	ENSMLEG00000044168	TSEN54	88	80.396	Mandrillus_leucophaeus
ENSJJAG00000007365	Tsen54	98	44.656	ENSMAMG00000019773	tsen54	98	46.768	Mastacembelus_armatus
ENSJJAG00000007365	Tsen54	97	45.472	ENSMZEG00005000884	tsen54	96	45.472	Maylandia_zebra
ENSJJAG00000007365	Tsen54	97	50.379	ENSMGAG00000009556	TSEN54	97	50.760	Meleagris_gallopavo
ENSJJAG00000007365	Tsen54	100	85.199	ENSMAUG00000016838	Tsen54	100	85.199	Mesocricetus_auratus
ENSJJAG00000007365	Tsen54	100	80.303	ENSMICG00000044012	TSEN54	100	80.682	Microcebus_murinus
ENSJJAG00000007365	Tsen54	100	85.009	ENSMOCG00000021585	Tsen54	100	85.009	Microtus_ochrogaster
ENSJJAG00000007365	Tsen54	96	42.745	ENSMMOG00000020189	tsen54	99	44.227	Mola_mola
ENSJJAG00000007365	Tsen54	98	67.416	ENSMODG00000007438	TSEN54	98	67.343	Monodelphis_domestica
ENSJJAG00000007365	Tsen54	99	45.180	ENSMALG00000020573	tsen54	99	46.455	Monopterus_albus
ENSJJAG00000007365	Tsen54	100	81.784	MGP_CAROLIEiJ_G0017417	Tsen54	100	81.784	Mus_caroli
ENSJJAG00000007365	Tsen54	100	82.922	ENSMUSG00000020781	Tsen54	100	82.922	Mus_musculus
ENSJJAG00000007365	Tsen54	100	81.973	MGP_PahariEiJ_G0018547	Tsen54	100	81.973	Mus_pahari
ENSJJAG00000007365	Tsen54	100	82.922	MGP_SPRETEiJ_G0018262	Tsen54	100	82.922	Mus_spretus
ENSJJAG00000007365	Tsen54	100	80.113	ENSMPUG00000013870	TSEN54	100	80.488	Mustela_putorius_furo
ENSJJAG00000007365	Tsen54	100	76.548	ENSMLUG00000015298	TSEN54	100	77.111	Myotis_lucifugus
ENSJJAG00000007365	Tsen54	100	85.041	ENSNGAG00000015673	Tsen54	100	85.041	Nannospalax_galili
ENSJJAG00000007365	Tsen54	89	63.579	ENSMEUG00000011908	TSEN54	100	64.000	Notamacropus_eugenii
ENSJJAG00000007365	Tsen54	100	74.480	ENSOPRG00000012513	TSEN54	100	74.480	Ochotona_princeps
ENSJJAG00000007365	Tsen54	97	45.962	ENSONIG00000009543	tsen54	96	45.962	Oreochromis_niloticus
ENSJJAG00000007365	Tsen54	99	72.897	ENSOCUG00000009875	TSEN54	99	74.206	Oryctolagus_cuniculus
ENSJJAG00000007365	Tsen54	97	44.814	ENSORLG00000000852	tsen54	97	44.814	Oryzias_latipes
ENSJJAG00000007365	Tsen54	97	44.882	ENSORLG00020018221	tsen54	97	45.079	Oryzias_latipes_hni
ENSJJAG00000007365	Tsen54	97	44.291	ENSORLG00015009413	tsen54	98	44.618	Oryzias_latipes_hsok
ENSJJAG00000007365	Tsen54	97	45.187	ENSOMEG00000014402	tsen54	94	45.187	Oryzias_melastigma
ENSJJAG00000007365	Tsen54	100	76.894	ENSOGAG00000001442	TSEN54	100	76.894	Otolemur_garnettii
ENSJJAG00000007365	Tsen54	86	76.149	ENSOARG00000010361	TSEN54	100	76.471	Ovis_aries
ENSJJAG00000007365	Tsen54	94	80.924	ENSPPAG00000043519	TSEN54	100	81.526	Pan_paniscus
ENSJJAG00000007365	Tsen54	100	80.863	ENSPPRG00000009162	TSEN54	100	81.426	Panthera_pardus
ENSJJAG00000007365	Tsen54	86	79.956	ENSPTIG00000019312	TSEN54	96	80.396	Panthera_tigris_altaica
ENSJJAG00000007365	Tsen54	100	81.629	ENSPTRG00000009646	TSEN54	100	82.008	Pan_troglodytes
ENSJJAG00000007365	Tsen54	99	81.214	ENSPANG00000020133	TSEN54	99	81.594	Papio_anubis
ENSJJAG00000007365	Tsen54	97	46.931	ENSPKIG00000023018	tsen54	100	46.259	Paramormyrops_kingsleyae
ENSJJAG00000007365	Tsen54	80	53.793	ENSPSIG00000012807	TSEN54	99	53.793	Pelodiscus_sinensis
ENSJJAG00000007365	Tsen54	92	35.776	ENSPMGG00000019578	tsen54	99	35.776	Periophthalmus_magnuspinnatus
ENSJJAG00000007365	Tsen54	100	85.769	ENSPEMG00000014857	Tsen54	100	85.769	Peromyscus_maniculatus_bairdii
ENSJJAG00000007365	Tsen54	99	46.481	ENSPFOG00000022740	tsen54	99	46.667	Poecilia_formosa
ENSJJAG00000007365	Tsen54	99	46.555	ENSPLAG00000014847	tsen54	99	46.555	Poecilia_latipinna
ENSJJAG00000007365	Tsen54	99	46.369	ENSPMEG00000022876	tsen54	99	46.369	Poecilia_mexicana
ENSJJAG00000007365	Tsen54	99	46.355	ENSPREG00000013090	tsen54	99	46.542	Poecilia_reticulata
ENSJJAG00000007365	Tsen54	91	75.260	ENSPPYG00000008629	TSEN54	100	76.091	Pongo_abelii
ENSJJAG00000007365	Tsen54	95	69.094	ENSPCAG00000002093	TSEN54	99	69.094	Procavia_capensis
ENSJJAG00000007365	Tsen54	100	82.197	ENSPCOG00000027880	TSEN54	100	82.576	Propithecus_coquereli
ENSJJAG00000007365	Tsen54	100	81.051	ENSPVAG00000008446	TSEN54	100	81.051	Pteropus_vampyrus
ENSJJAG00000007365	Tsen54	92	45.984	ENSPNYG00000010217	tsen54	99	45.984	Pundamilia_nyererei
ENSJJAG00000007365	Tsen54	99	46.981	ENSPNAG00000003770	tsen54	98	46.981	Pygocentrus_nattereri
ENSJJAG00000007365	Tsen54	100	83.302	ENSRNOG00000004598	Tsen54	100	83.302	Rattus_norvegicus
ENSJJAG00000007365	Tsen54	100	81.250	ENSRBIG00000043040	TSEN54	100	81.250	Rhinopithecus_bieti
ENSJJAG00000007365	Tsen54	100	81.061	ENSRROG00000030797	TSEN54	100	81.061	Rhinopithecus_roxellana
ENSJJAG00000007365	Tsen54	99	77.989	ENSSBOG00000013543	TSEN54	99	78.368	Saimiri_boliviensis_boliviensis
ENSJJAG00000007365	Tsen54	99	64.728	ENSSHAG00000018127	TSEN54	98	64.728	Sarcophilus_harrisii
ENSJJAG00000007365	Tsen54	81	45.833	ENSSFOG00015004093	tsen54	100	46.065	Scleropages_formosus
ENSJJAG00000007365	Tsen54	98	44.677	ENSSMAG00000012449	tsen54	99	44.762	Scophthalmus_maximus
ENSJJAG00000007365	Tsen54	97	47.206	ENSSDUG00000021506	tsen54	97	47.206	Seriola_dumerili
ENSJJAG00000007365	Tsen54	97	46.821	ENSSLDG00000016303	tsen54	97	46.821	Seriola_lalandi_dorsalis
ENSJJAG00000007365	Tsen54	90	52.125	ENSSPUG00000008988	TSEN54	100	52.125	Sphenodon_punctatus
ENSJJAG00000007365	Tsen54	92	46.201	ENSSPAG00000008098	-	99	46.201	Stegastes_partitus
ENSJJAG00000007365	Tsen54	80	43.897	ENSSPAG00000008047	tsen54	99	43.897	Stegastes_partitus
ENSJJAG00000007365	Tsen54	100	79.174	ENSSSCG00000036852	TSEN54	100	80.113	Sus_scrofa
ENSJJAG00000007365	Tsen54	86	52.747	ENSTGUG00000008548	TSEN54	100	52.747	Taeniopygia_guttata
ENSJJAG00000007365	Tsen54	97	45.793	ENSTRUG00000004230	tsen54	96	45.988	Takifugu_rubripes
ENSJJAG00000007365	Tsen54	77	62.983	ENSTNIG00000011281	tsen54	99	44.656	Tetraodon_nigroviridis
ENSJJAG00000007365	Tsen54	86	77.826	ENSTTRG00000015828	TSEN54	100	78.261	Tursiops_truncatus
ENSJJAG00000007365	Tsen54	81	77.546	ENSUAMG00000010045	TSEN54	100	77.546	Ursus_americanus
ENSJJAG00000007365	Tsen54	84	77.852	ENSUMAG00000008979	TSEN54	100	78.300	Ursus_maritimus
ENSJJAG00000007365	Tsen54	97	80.777	ENSVVUG00000011411	TSEN54	98	81.238	Vulpes_vulpes
ENSJJAG00000007365	Tsen54	98	48.485	ENSXETG00000012532	tsen54	99	71.667	Xenopus_tropicalis
ENSJJAG00000007365	Tsen54	97	43.529	ENSXCOG00000018245	tsen54	99	43.529	Xiphophorus_couchianus
ENSJJAG00000007365	Tsen54	99	46.095	ENSXMAG00000018818	tsen54	99	46.286	Xiphophorus_maculatus