EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSJJAG00000007781 (Gene tree)
Gene ID
101603236
Gene Symbol
Pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Jaculus_jaculus
Status
putative
Strand
Plus strand
Length
13318 bases
Position
chrJH725513.1:2425071-2438388
Accession
101603236
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSJJAP00000003985PABPPF00658.181.7e-3111
ENSJJAP00000003962PABPPF00658.181.8e-3111
ENSJJAP00000003981PABPPF00658.182e-3111
ENSJJAP00000003962RRM_5PF13893.61.1e-0912
ENSJJAP00000003962RRM_5PF13893.61.1e-0922
ENSJJAP00000003985RRM_5PF13893.61.9e-0611
ENSJJAP00000003981RRM_5PF13893.62.4e-0611
ENSJJAP00000003962RRM_1PF00076.225.2e-9014
ENSJJAP00000003962RRM_1PF00076.225.2e-9024
ENSJJAP00000003962RRM_1PF00076.225.2e-9034
ENSJJAP00000003962RRM_1PF00076.225.2e-9044
ENSJJAP00000003985RRM_1PF00076.222.2e-7213
ENSJJAP00000003985RRM_1PF00076.222.2e-7223
ENSJJAP00000003985RRM_1PF00076.222.2e-7233
ENSJJAP00000003981RRM_1PF00076.222.9e-7213
ENSJJAP00000003981RRM_1PF00076.222.9e-7223
ENSJJAP00000003981RRM_1PF00076.222.9e-7233
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSJJAT00000009132-1824-ENSJJAP00000003985607 (aa)--
ENSJJAT00000009081-1917XM_004665189ENSJJAP00000003962638 (aa)XP_004665246-
ENSJJAT00000009121-1911-ENSJJAP00000003981636 (aa)--
Gene Model
Click here to download ENSJJAG00000007781's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000007781's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSJJAG00000007781Pabpc45534.375ENSJJAG00000002566-5230.000
ENSJJAG00000007781Pabpc45833.735ENSJJAG00000023099Elavl49233.735
ENSJJAG00000007781Pabpc45632.895ENSJJAG00000015838Elavl19532.895
ENSJJAG00000007781Pabpc45734.940ENSJJAG00000008247Elavl28634.940
ENSJJAG00000007781Pabpc45765.258ENSJJAG00000011960Pabpc59965.258
ENSJJAG00000007781Pabpc49964.953ENSJJAG00000014258Pabpc29964.798
ENSJJAG00000007781Pabpc45637.647ENSJJAG00000011472Celf26037.647
ENSJJAG00000007781Pabpc46631.447ENSJJAG00000015563-6231.447
ENSJJAG00000007781Pabpc49167.718ENSJJAG00000019230Pabpc69967.718
ENSJJAG00000007781Pabpc49975.734ENSJJAG00000015918Pabpc19975.889
ENSJJAG00000007781Pabpc45774.619ENSJJAG00000007037-9974.619
ENSJJAG00000007781Pabpc45332.000ENSJJAG00000006954Hnrnpa05231.788
ENSJJAG00000007781Pabpc45634.568ENSJJAG00000017978Tia18334.568
ENSJJAG00000007781Pabpc49651.332ENSJJAG00000022406Pabpc1l9849.841
ENSJJAG00000007781Pabpc45630.682ENSJJAG00000005398-7630.682
ENSJJAG00000007781Pabpc45833.735ENSJJAG00000023513Elavl39233.735
ENSJJAG00000007781Pabpc46170.541ENSJJAG00000004090Pabpc4l9970.541
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSJJAG00000007781Pabpc410097.050ENSG00000090621PABPC4100100.000Homo_sapiens
ENSJJAG00000007781Pabpc49980.280ENSAPOG00000001161pabpc410080.982Acanthochromis_polyacanthus
ENSJJAG00000007781Pabpc49854.849ENSAMEG00000015083-9954.690Ailuropoda_melanoleuca
ENSJJAG00000007781Pabpc410094.697ENSAMEG00000011535-10094.697Ailuropoda_melanoleuca
ENSJJAG00000007781Pabpc410080.551ENSACIG00000023343pabpc410080.828Amphilophus_citrinellus
ENSJJAG00000007781Pabpc49980.280ENSAOCG00000021529pabpc410080.982Amphiprion_ocellaris
ENSJJAG00000007781Pabpc49980.280ENSAPEG00000019196pabpc410080.982Amphiprion_percula
ENSJJAG00000007781Pabpc49979.690ENSATEG00000007402pabpc410080.245Anabas_testudineus
ENSJJAG00000007781Pabpc49986.470ENSAPLG00000009729-10086.470Anas_platyrhynchos
ENSJJAG00000007781Pabpc49985.315ENSACAG00000002544PABPC410084.965Anolis_carolinensis
ENSJJAG00000007781Pabpc410094.545ENSANAG00000025079PABPC410094.545Aotus_nancymaae
ENSJJAG00000007781Pabpc410080.245ENSACLG00000019558pabpc410080.982Astatotilapia_calliptera
ENSJJAG00000007781Pabpc49977.377ENSAMXG00000018779pabpc49977.833Astyanax_mexicanus
ENSJJAG00000007781Pabpc45686.228ENSBTAG00000048536-9886.228Bos_taurus
ENSJJAG00000007781Pabpc410096.899ENSBTAG00000017125PABPC410096.899Bos_taurus
ENSJJAG00000007781Pabpc410094.545ENSCJAG00000002512-10094.545Callithrix_jacchus
ENSJJAG00000007781Pabpc47885.547ENSCJAG00000045953-9286.420Callithrix_jacchus
ENSJJAG00000007781Pabpc49994.295ENSCAFG00000003081PABPC410093.012Canis_familiaris
ENSJJAG00000007781Pabpc410094.848ENSCAFG00020004161PABPC410094.848Canis_lupus_dingo
ENSJJAG00000007781Pabpc410076.708ENSCHIG00000023385-10076.398Capra_hircus
ENSJJAG00000007781Pabpc410094.697ENSCHIG00000019398-10094.697Capra_hircus
ENSJJAG00000007781Pabpc410094.848ENSTSYG00000006532PABPC410094.848Carlito_syrichta
ENSJJAG00000007781Pabpc49994.377ENSCAPG00000015984PABPC410094.377Cavia_aperea
ENSJJAG00000007781Pabpc410094.394ENSCPOG00000009552PABPC410094.394Cavia_porcellus
ENSJJAG00000007781Pabpc410094.545ENSCCAG00000037306PABPC410094.545Cebus_capucinus
ENSJJAG00000007781Pabpc410094.848ENSCATG00000042164PABPC410094.848Cercocebus_atys
ENSJJAG00000007781Pabpc410094.697ENSCLAG00000011899PABPC410094.697Chinchilla_lanigera
ENSJJAG00000007781Pabpc410094.848ENSCSAG00000001135PABPC410094.848Chlorocebus_sabaeus
ENSJJAG00000007781Pabpc48494.723ENSCHOG00000005327PABPC48194.723Choloepus_hoffmanni
ENSJJAG00000007781Pabpc49987.247ENSCPBG00000001038PABPC410086.781Chrysemys_picta_bellii
ENSJJAG00000007781Pabpc49994.777ENSCANG00000034177PABPC410094.777Colobus_angolensis_palliatus
ENSJJAG00000007781Pabpc49993.692ENSCGRG00001018166Pabpc410093.062Cricetulus_griseus_chok1gshd
ENSJJAG00000007781Pabpc49896.000ENSCGRG00000009777Pabpc410095.298Cricetulus_griseus_crigri
ENSJJAG00000007781Pabpc410079.786ENSCSEG00000000130pabpc410079.939Cynoglossus_semilaevis
ENSJJAG00000007781Pabpc49980.560ENSCVAG00000019246pabpc410081.464Cyprinodon_variegatus
ENSJJAG00000007781Pabpc49981.182ENSDARG00000059259pabpc410081.774Danio_rerio
ENSJJAG00000007781Pabpc49894.310ENSDNOG00000018444-9994.310Dasypus_novemcinctus
ENSJJAG00000007781Pabpc410096.894ENSDORG00000011581Pabpc410096.894Dipodomys_ordii
ENSJJAG00000007781Pabpc48660.579ENSETEG00000009172-9959.857Echinops_telfairi
ENSJJAG00000007781Pabpc4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSJJAG00000007781Pabpc49974.264ENSEBUG00000000992pabpc49977.049Eptatretus_burgeri
ENSJJAG00000007781Pabpc49773.851ENSEBUG00000013782pabpc49974.224Eptatretus_burgeri
ENSJJAG00000007781Pabpc410095.000ENSEASG00005014119PABPC410095.000Equus_asinus_asinus
ENSJJAG00000007781Pabpc410095.000ENSECAG00000009396PABPC410095.000Equus_caballus
ENSJJAG00000007781Pabpc410091.818ENSEEUG00000002962PABPC410091.818Erinaceus_europaeus
ENSJJAG00000007781Pabpc49980.469ENSELUG00000003195pabpc49880.526Esox_lucius
ENSJJAG00000007781Pabpc410095.000ENSFCAG00000015254-10095.000Felis_catus
ENSJJAG00000007781Pabpc49986.003ENSFALG00000000543PABPC410086.003Ficedula_albicollis
ENSJJAG00000007781Pabpc410094.848ENSFDAG00000020016-10094.848Fukomys_damarensis
ENSJJAG00000007781Pabpc49066.667ENSFDAG00000010581-10063.462Fukomys_damarensis
ENSJJAG00000007781Pabpc410080.398ENSFHEG00000007548pabpc49389.524Fundulus_heteroclitus
ENSJJAG00000007781Pabpc49979.630ENSGMOG00000019025pabpc49979.289Gadus_morhua
ENSJJAG00000007781Pabpc49986.781ENSGALG00000003800PABPC410086.781Gallus_gallus
ENSJJAG00000007781Pabpc49982.783ENSGAFG00000018195pabpc49595.000Gambusia_affinis
ENSJJAG00000007781Pabpc410078.867ENSGACG00000007179pabpc410079.358Gasterosteus_aculeatus
ENSJJAG00000007781Pabpc49987.092ENSGAGG00000001888PABPC410086.625Gopherus_agassizii
ENSJJAG00000007781Pabpc410094.697ENSGGOG00000004002PABPC410094.697Gorilla_gorilla
ENSJJAG00000007781Pabpc410080.398ENSHBUG00000020206pabpc410081.135Haplochromis_burtoni
ENSJJAG00000007781Pabpc410097.205ENSHGLG00000011162PABPC410097.205Heterocephalus_glaber_female
ENSJJAG00000007781Pabpc410097.205ENSHGLG00100001580PABPC410097.205Heterocephalus_glaber_male
ENSJJAG00000007781Pabpc410079.755ENSHCOG00000012694pabpc410080.215Hippocampus_comes
ENSJJAG00000007781Pabpc49879.843ENSIPUG00000016620pabpc49979.969Ictalurus_punctatus
ENSJJAG00000007781Pabpc410097.205ENSSTOG00000010416PABPC410097.205Ictidomys_tridecemlineatus
ENSJJAG00000007781Pabpc49979.815ENSKMAG00000013597pabpc49980.093Kryptolebias_marmoratus
ENSJJAG00000007781Pabpc410079.511ENSLBEG00000013654pabpc410079.969Labrus_bergylta
ENSJJAG00000007781Pabpc49983.617ENSLACG00000011907PABPC410083.617Latimeria_chalumnae
ENSJJAG00000007781Pabpc49981.944ENSLOCG00000001877pabpc49982.689Lepisosteus_oculatus
ENSJJAG00000007781Pabpc410095.000ENSLAFG00000000151PABPC410095.000Loxodonta_africana
ENSJJAG00000007781Pabpc410094.848ENSMFAG00000041481PABPC410094.848Macaca_fascicularis
ENSJJAG00000007781Pabpc410094.848ENSMMUG00000007497PABPC410094.848Macaca_mulatta
ENSJJAG00000007781Pabpc410094.848ENSMNEG00000043054PABPC410094.848Macaca_nemestrina
ENSJJAG00000007781Pabpc410094.848ENSMLEG00000040716PABPC410094.848Mandrillus_leucophaeus
ENSJJAG00000007781Pabpc49980.280ENSMAMG00000010025pabpc49980.864Mastacembelus_armatus
ENSJJAG00000007781Pabpc410080.092ENSMZEG00005006141pabpc410080.828Maylandia_zebra
ENSJJAG00000007781Pabpc49984.694ENSMGAG00000005408PABPC410084.694Meleagris_gallopavo
ENSJJAG00000007781Pabpc47186.058ENSMAUG00000001295-9786.058Mesocricetus_auratus
ENSJJAG00000007781Pabpc47598.958ENSMAUG00000019763-8494.495Mesocricetus_auratus
ENSJJAG00000007781Pabpc45681.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSJJAG00000007781Pabpc49979.826ENSMICG00000036729-10079.826Microcebus_murinus
ENSJJAG00000007781Pabpc48995.478ENSMICG00000016633-10095.478Microcebus_murinus
ENSJJAG00000007781Pabpc410093.223ENSMOCG00000006763Pabpc410093.223Microtus_ochrogaster
ENSJJAG00000007781Pabpc410078.241ENSMMOG00000002363pabpc49978.891Mola_mola
ENSJJAG00000007781Pabpc45774.212ENSMODG00000018051-9174.212Monodelphis_domestica
ENSJJAG00000007781Pabpc49886.357ENSMODG00000017657-10085.388Monodelphis_domestica
ENSJJAG00000007781Pabpc49980.216ENSMALG00000011017pabpc410080.611Monopterus_albus
ENSJJAG00000007781Pabpc49982.404MGP_CAROLIEiJ_G0024864-10082.578Mus_caroli
ENSJJAG00000007781Pabpc410092.727MGP_CAROLIEiJ_G0026435-10098.582Mus_caroli
ENSJJAG00000007781Pabpc410096.118ENSMUSG00000011257Pabpc410098.810Mus_musculus
ENSJJAG00000007781Pabpc49993.702MGP_PahariEiJ_G0028765Pabpc410099.291Mus_pahari
ENSJJAG00000007781Pabpc49974.611MGP_SPRETEiJ_G0027415Pabpc410098.582Mus_spretus
ENSJJAG00000007781Pabpc410095.000ENSMPUG00000014414-10095.000Mustela_putorius_furo
ENSJJAG00000007781Pabpc49551.010ENSMPUG00000006836-10050.842Mustela_putorius_furo
ENSJJAG00000007781Pabpc410091.925ENSMLUG00000012068PABPC410091.925Myotis_lucifugus
ENSJJAG00000007781Pabpc410096.894ENSNGAG00000018292Pabpc410096.894Nannospalax_galili
ENSJJAG00000007781Pabpc46681.921ENSNBRG00000010047-7581.921Neolamprologus_brichardi
ENSJJAG00000007781Pabpc45893.237ENSNBRG00000009708pabpc49893.237Neolamprologus_brichardi
ENSJJAG00000007781Pabpc410097.205ENSNLEG00000011928PABPC410097.205Nomascus_leucogenys
ENSJJAG00000007781Pabpc48596.825ENSOPRG00000011984PABPC48796.825Ochotona_princeps
ENSJJAG00000007781Pabpc45185.000ENSODEG00000013457-10085.000Octodon_degus
ENSJJAG00000007781Pabpc410094.545ENSODEG00000006592-10094.545Octodon_degus
ENSJJAG00000007781Pabpc49984.362ENSODEG00000017434-9491.892Octodon_degus
ENSJJAG00000007781Pabpc410080.398ENSONIG00000008176pabpc410080.828Oreochromis_niloticus
ENSJJAG00000007781Pabpc49987.092ENSOANG00000010001PABPC410086.314Ornithorhynchus_anatinus
ENSJJAG00000007781Pabpc49694.304ENSOCUG00000000562PABPC48894.304Oryctolagus_cuniculus
ENSJJAG00000007781Pabpc49988.580ENSORLG00000017479pabpc49988.580Oryzias_latipes
ENSJJAG00000007781Pabpc49988.580ENSORLG00020018644pabpc49988.580Oryzias_latipes_hni
ENSJJAG00000007781Pabpc49988.580ENSORLG00015015042pabpc49988.580Oryzias_latipes_hsok
ENSJJAG00000007781Pabpc49980.280ENSOMEG00000014410pabpc49981.202Oryzias_melastigma
ENSJJAG00000007781Pabpc410096.909ENSOGAG00000004067PABPC410096.909Otolemur_garnettii
ENSJJAG00000007781Pabpc410094.697ENSOARG00000020060PABPC410094.697Ovis_aries
ENSJJAG00000007781Pabpc410094.697ENSPPAG00000043625PABPC410094.697Pan_paniscus
ENSJJAG00000007781Pabpc410095.000ENSPPRG00000024727PABPC410095.000Panthera_pardus
ENSJJAG00000007781Pabpc410095.000ENSPTIG00000005829PABPC410095.000Panthera_tigris_altaica
ENSJJAG00000007781Pabpc410094.697ENSPTRG00000000573PABPC410094.697Pan_troglodytes
ENSJJAG00000007781Pabpc410095.000ENSPANG00000009484PABPC410095.000Papio_anubis
ENSJJAG00000007781Pabpc49981.269ENSPKIG00000025356pabpc49981.550Paramormyrops_kingsleyae
ENSJJAG00000007781Pabpc49987.247ENSPSIG00000016892PABPC410086.781Pelodiscus_sinensis
ENSJJAG00000007781Pabpc410078.980ENSPMGG00000009073pabpc49978.704Periophthalmus_magnuspinnatus
ENSJJAG00000007781Pabpc410091.460ENSPEMG00000024193-9991.460Peromyscus_maniculatus_bairdii
ENSJJAG00000007781Pabpc410093.182ENSPEMG00000023569-9993.182Peromyscus_maniculatus_bairdii
ENSJJAG00000007781Pabpc49568.463ENSPMAG00000007885pabpc410067.698Petromyzon_marinus
ENSJJAG00000007781Pabpc48970.289ENSPMAG00000002836pabpc410070.798Petromyzon_marinus
ENSJJAG00000007781Pabpc49887.797ENSPCIG00000020674PABPC410091.429Phascolarctos_cinereus
ENSJJAG00000007781Pabpc410079.786ENSPFOG00000002682pabpc410080.581Poecilia_formosa
ENSJJAG00000007781Pabpc410079.632ENSPLAG00000010112pabpc410080.982Poecilia_latipinna
ENSJJAG00000007781Pabpc49980.249ENSPMEG00000019739pabpc410080.734Poecilia_mexicana
ENSJJAG00000007781Pabpc410080.092ENSPREG00000001589pabpc410080.982Poecilia_reticulata
ENSJJAG00000007781Pabpc410094.697ENSPPYG00000001506PABPC410094.697Pongo_abelii
ENSJJAG00000007781Pabpc410090.455ENSPCAG00000003341PABPC410090.455Procavia_capensis
ENSJJAG00000007781Pabpc48493.069ENSPCOG00000025882-9593.069Propithecus_coquereli
ENSJJAG00000007781Pabpc410094.856ENSPCOG00000023725-10094.856Propithecus_coquereli
ENSJJAG00000007781Pabpc49994.444ENSPVAG00000002187PABPC410094.444Pteropus_vampyrus
ENSJJAG00000007781Pabpc410080.245ENSPNYG00000006134pabpc410080.982Pundamilia_nyererei
ENSJJAG00000007781Pabpc410079.817ENSPNAG00000024355pabpc410080.031Pygocentrus_nattereri
ENSJJAG00000007781Pabpc410093.313ENSRNOG00000028592AABR07035074.110093.313Rattus_norvegicus
ENSJJAG00000007781Pabpc410095.186ENSRNOG00000015642Pabpc410095.186Rattus_norvegicus
ENSJJAG00000007781Pabpc410094.848ENSRBIG00000039761PABPC410094.848Rhinopithecus_bieti
ENSJJAG00000007781Pabpc410094.848ENSRROG00000033355PABPC410094.848Rhinopithecus_roxellana
ENSJJAG00000007781Pabpc410094.697ENSSBOG00000026193PABPC410094.697Saimiri_boliviensis_boliviensis
ENSJJAG00000007781Pabpc49887.639ENSSHAG00000018139PABPC410086.625Sarcophilus_harrisii
ENSJJAG00000007781Pabpc49982.315ENSSFOG00015023514pabpc49981.862Scleropages_formosus
ENSJJAG00000007781Pabpc49979.845ENSSMAG00000009007pabpc49980.620Scophthalmus_maximus
ENSJJAG00000007781Pabpc49979.814ENSSDUG00000012683pabpc49586.207Seriola_dumerili
ENSJJAG00000007781Pabpc49979.814ENSSLDG00000013025pabpc49785.217Seriola_lalandi_dorsalis
ENSJJAG00000007781Pabpc410086.970ENSSARG00000000310PABPC410086.970Sorex_araneus
ENSJJAG00000007781Pabpc49986.003ENSSPUG00000003204PABPC410086.090Sphenodon_punctatus
ENSJJAG00000007781Pabpc49980.620ENSSPAG00000009252pabpc49788.565Stegastes_partitus
ENSJJAG00000007781Pabpc410095.000ENSSSCG00000003660-10095.000Sus_scrofa
ENSJJAG00000007781Pabpc48951.573ENSSSCG00000036170-9651.224Sus_scrofa
ENSJJAG00000007781Pabpc49984.091ENSTGUG00000001266PABPC410084.091Taeniopygia_guttata
ENSJJAG00000007781Pabpc410079.448ENSTRUG00000005907pabpc49980.401Takifugu_rubripes
ENSJJAG00000007781Pabpc410076.235ENSTNIG00000016902pabpc49975.926Tetraodon_nigroviridis
ENSJJAG00000007781Pabpc49984.848ENSTBEG00000009035PABPC410084.848Tupaia_belangeri
ENSJJAG00000007781Pabpc49985.210ENSTTRG00000014340PABPC410085.210Tursiops_truncatus
ENSJJAG00000007781Pabpc410094.697ENSUAMG00000000303PABPC410094.697Ursus_americanus
ENSJJAG00000007781Pabpc410094.697ENSUMAG00000019585PABPC410098.113Ursus_maritimus
ENSJJAG00000007781Pabpc48396.429ENSVPAG00000010041PABPC47796.429Vicugna_pacos
ENSJJAG00000007781Pabpc410094.848ENSVVUG00000005215PABPC410094.848Vulpes_vulpes
ENSJJAG00000007781Pabpc49979.005ENSXETG00000010946pabpc410079.005Xenopus_tropicalis
ENSJJAG00000007781Pabpc46096.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSJJAG00000007781Pabpc49981.039ENSXCOG00000013190pabpc49686.792Xiphophorus_couchianus
ENSJJAG00000007781Pabpc410079.939ENSXMAG00000019007pabpc410080.828Xiphophorus_maculatus

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