EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000008838 (Gene tree)
Gene ID: 101616539
Gene Symbol: Prpf4
Alias: 1600015H11Rik
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 19892 bases
Position: chrJH725490.1:253074-272965
Accession: 101616539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000004298	PRP4	PF08799.11	4e-14	1	1
ENSJJAP00000004291	PRP4	PF08799.11	4.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000010026	-	1721	XM_004662715	ENSJJAP00000004291	521 (aa)	XP_004662772	UPI0003332EEA
ENSJJAT00000010042	-	1521	-	ENSJJAP00000004298	506 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000008838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000008838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000008838	Prpf4	56	33.673	ENSJJAG00000004124	Tbl3	71	33.673
ENSJJAG00000008838	Prpf4	56	30.625	ENSJJAG00000018739	Poc1a	82	30.625
ENSJJAG00000008838	Prpf4	56	33.898	ENSJJAG00000013503	Poc1b	63	33.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000008838	Prpf4	100	99.232	ENSG00000136875	PRPF4	100	99.232	Homo_sapiens
ENSJJAG00000008838	Prpf4	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSJJAG00000008838	Prpf4	100	99.424	ENSAMEG00000013048	PRPF4	98	99.424	Ailuropoda_melanoleuca
ENSJJAG00000008838	Prpf4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSJJAG00000008838	Prpf4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSJJAG00000008838	Prpf4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSJJAG00000008838	Prpf4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSJJAG00000008838	Prpf4	100	89.060	ENSAPLG00000006534	PRPF4	97	89.060	Anas_platyrhynchos
ENSJJAG00000008838	Prpf4	100	89.866	ENSACAG00000015110	PRPF4	100	89.866	Anolis_carolinensis
ENSJJAG00000008838	Prpf4	100	99.616	ENSANAG00000022464	PRPF4	96	99.616	Aotus_nancymaae
ENSJJAG00000008838	Prpf4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSJJAG00000008838	Prpf4	97	70.080	ENSAMXG00000006756	prpf4	99	73.267	Astyanax_mexicanus
ENSJJAG00000008838	Prpf4	100	98.656	ENSBTAG00000004571	PRPF4	100	98.656	Bos_taurus
ENSJJAG00000008838	Prpf4	90	44.093	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSJJAG00000008838	Prpf4	100	99.425	ENSCJAG00000017856	PRPF4	100	99.425	Callithrix_jacchus
ENSJJAG00000008838	Prpf4	100	99.424	ENSCAFG00000003224	PRPF4	97	99.424	Canis_familiaris
ENSJJAG00000008838	Prpf4	100	99.424	ENSCAFG00020022637	PRPF4	100	99.424	Canis_lupus_dingo
ENSJJAG00000008838	Prpf4	100	99.234	ENSCHIG00000024648	-	100	99.234	Capra_hircus
ENSJJAG00000008838	Prpf4	100	99.424	ENSTSYG00000010366	PRPF4	100	99.424	Carlito_syrichta
ENSJJAG00000008838	Prpf4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSJJAG00000008838	Prpf4	100	99.232	ENSCPOG00000010747	-	100	99.232	Cavia_porcellus
ENSJJAG00000008838	Prpf4	100	92.898	ENSCPOG00000014729	-	100	92.898	Cavia_porcellus
ENSJJAG00000008838	Prpf4	100	99.424	ENSCCAG00000028990	PRPF4	100	99.424	Cebus_capucinus
ENSJJAG00000008838	Prpf4	100	99.232	ENSCATG00000021552	PRPF4	100	99.232	Cercocebus_atys
ENSJJAG00000008838	Prpf4	100	99.424	ENSCLAG00000013448	PRPF4	100	99.424	Chinchilla_lanigera
ENSJJAG00000008838	Prpf4	87	95.354	ENSCHOG00000007233	PRPF4	100	95.354	Choloepus_hoffmanni
ENSJJAG00000008838	Prpf4	99	91.262	ENSCPBG00000019136	PRPF4	74	91.262	Chrysemys_picta_bellii
ENSJJAG00000008838	Prpf4	96	59.449	ENSCING00000001299	-	97	58.812	Ciona_intestinalis
ENSJJAG00000008838	Prpf4	96	57.738	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSJJAG00000008838	Prpf4	100	99.424	ENSCANG00000003246	PRPF4	100	99.424	Colobus_angolensis_palliatus
ENSJJAG00000008838	Prpf4	100	99.232	ENSCGRG00001016992	Prpf4	100	99.232	Cricetulus_griseus_chok1gshd
ENSJJAG00000008838	Prpf4	100	99.232	ENSCGRG00000017560	Prpf4	100	99.232	Cricetulus_griseus_crigri
ENSJJAG00000008838	Prpf4	97	75.644	ENSCSEG00000020451	prpf4	99	75.644	Cynoglossus_semilaevis
ENSJJAG00000008838	Prpf4	97	79.604	ENSDARG00000067639	prpf4	99	79.604	Danio_rerio
ENSJJAG00000008838	Prpf4	100	98.851	ENSDNOG00000013203	PRPF4	100	98.851	Dasypus_novemcinctus
ENSJJAG00000008838	Prpf4	100	99.232	ENSDORG00000026275	Prpf4	100	99.232	Dipodomys_ordii
ENSJJAG00000008838	Prpf4	87	56.455	FBgn0036733	U4-U6-60K	99	50.365	Drosophila_melanogaster
ENSJJAG00000008838	Prpf4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSJJAG00000008838	Prpf4	95	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSJJAG00000008838	Prpf4	100	99.616	ENSEASG00005022678	PRPF4	100	99.616	Equus_asinus_asinus
ENSJJAG00000008838	Prpf4	100	99.616	ENSECAG00000007072	PRPF4	100	99.616	Equus_caballus
ENSJJAG00000008838	Prpf4	100	78.821	ENSEEUG00000007480	PRPF4	100	78.821	Erinaceus_europaeus
ENSJJAG00000008838	Prpf4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSJJAG00000008838	Prpf4	100	99.425	ENSFCAG00000005514	PRPF4	100	99.425	Felis_catus
ENSJJAG00000008838	Prpf4	98	88.117	ENSFALG00000005423	PRPF4	90	85.376	Ficedula_albicollis
ENSJJAG00000008838	Prpf4	100	99.232	ENSFDAG00000005839	PRPF4	100	99.232	Fukomys_damarensis
ENSJJAG00000008838	Prpf4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSJJAG00000008838	Prpf4	98	90.020	ENSGALG00000008857	PRPF4	96	89.341	Gallus_gallus
ENSJJAG00000008838	Prpf4	67	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSJJAG00000008838	Prpf4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSJJAG00000008838	Prpf4	99	91.068	ENSGAGG00000025029	PRPF4	95	91.068	Gopherus_agassizii
ENSJJAG00000008838	Prpf4	100	99.232	ENSGGOG00000006943	PRPF4	100	99.232	Gorilla_gorilla
ENSJJAG00000008838	Prpf4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSJJAG00000008838	Prpf4	100	82.027	ENSHGLG00000016628	-	100	82.792	Heterocephalus_glaber_female
ENSJJAG00000008838	Prpf4	100	99.232	ENSHGLG00000015191	PRPF4	100	99.232	Heterocephalus_glaber_female
ENSJJAG00000008838	Prpf4	100	80.897	ENSHGLG00000003838	-	100	80.897	Heterocephalus_glaber_female
ENSJJAG00000008838	Prpf4	100	80.897	ENSHGLG00100005571	-	100	80.897	Heterocephalus_glaber_male
ENSJJAG00000008838	Prpf4	97	78.614	ENSIPUG00000017956	PRPF4	99	78.614	Ictalurus_punctatus
ENSJJAG00000008838	Prpf4	100	99.040	ENSSTOG00000027833	PRPF4	100	99.040	Ictidomys_tridecemlineatus
ENSJJAG00000008838	Prpf4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSJJAG00000008838	Prpf4	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSJJAG00000008838	Prpf4	99	80.539	ENSLACG00000016317	PRPF4	99	80.539	Latimeria_chalumnae
ENSJJAG00000008838	Prpf4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSJJAG00000008838	Prpf4	100	98.659	ENSLAFG00000018225	PRPF4	100	98.659	Loxodonta_africana
ENSJJAG00000008838	Prpf4	100	99.040	ENSMFAG00000039397	PRPF4	100	99.040	Macaca_fascicularis
ENSJJAG00000008838	Prpf4	100	99.232	ENSMMUG00000005844	PRPF4	100	99.232	Macaca_mulatta
ENSJJAG00000008838	Prpf4	100	88.676	ENSMNEG00000033737	PRPF4	100	88.676	Macaca_nemestrina
ENSJJAG00000008838	Prpf4	100	99.232	ENSMLEG00000040284	PRPF4	100	99.232	Mandrillus_leucophaeus
ENSJJAG00000008838	Prpf4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSJJAG00000008838	Prpf4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSJJAG00000008838	Prpf4	99	88.269	ENSMGAG00000001796	PRPF4	97	88.269	Meleagris_gallopavo
ENSJJAG00000008838	Prpf4	100	98.848	ENSMAUG00000018022	Prpf4	100	98.848	Mesocricetus_auratus
ENSJJAG00000008838	Prpf4	100	98.464	ENSMICG00000015022	PRPF4	100	98.276	Microcebus_murinus
ENSJJAG00000008838	Prpf4	100	98.656	ENSMOCG00000018273	Prpf4	100	98.656	Microtus_ochrogaster
ENSJJAG00000008838	Prpf4	97	74.653	ENSMMOG00000021177	prpf4	99	74.653	Mola_mola
ENSJJAG00000008838	Prpf4	100	95.220	ENSMODG00000004444	-	100	95.220	Monodelphis_domestica
ENSJJAG00000008838	Prpf4	100	95.029	ENSMODG00000025096	-	97	95.029	Monodelphis_domestica
ENSJJAG00000008838	Prpf4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSJJAG00000008838	Prpf4	100	99.040	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.040	Mus_caroli
ENSJJAG00000008838	Prpf4	100	99.040	ENSMUSG00000066148	Prpf4	100	99.040	Mus_musculus
ENSJJAG00000008838	Prpf4	100	98.848	MGP_PahariEiJ_G0028413	Prpf4	100	98.848	Mus_pahari
ENSJJAG00000008838	Prpf4	100	99.040	MGP_SPRETEiJ_G0027042	Prpf4	100	99.040	Mus_spretus
ENSJJAG00000008838	Prpf4	100	99.424	ENSMPUG00000007883	PRPF4	100	99.424	Mustela_putorius_furo
ENSJJAG00000008838	Prpf4	100	99.040	ENSMLUG00000015309	-	97	99.040	Myotis_lucifugus
ENSJJAG00000008838	Prpf4	100	97.121	ENSMLUG00000008626	-	97	97.121	Myotis_lucifugus
ENSJJAG00000008838	Prpf4	100	93.858	ENSNGAG00000000468	Prpf4	100	93.858	Nannospalax_galili
ENSJJAG00000008838	Prpf4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSJJAG00000008838	Prpf4	100	99.616	ENSNLEG00000016647	PRPF4	100	99.616	Nomascus_leucogenys
ENSJJAG00000008838	Prpf4	99	94.942	ENSMEUG00000013256	PRPF4	100	94.942	Notamacropus_eugenii
ENSJJAG00000008838	Prpf4	100	98.659	ENSOPRG00000005302	PRPF4	100	98.659	Ochotona_princeps
ENSJJAG00000008838	Prpf4	100	99.616	ENSODEG00000018147	PRPF4	100	99.616	Octodon_degus
ENSJJAG00000008838	Prpf4	99	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSJJAG00000008838	Prpf4	100	99.424	ENSOCUG00000005046	PRPF4	100	99.424	Oryctolagus_cuniculus
ENSJJAG00000008838	Prpf4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSJJAG00000008838	Prpf4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSJJAG00000008838	Prpf4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSJJAG00000008838	Prpf4	100	94.242	ENSOGAG00000007802	PRPF4	98	94.242	Otolemur_garnettii
ENSJJAG00000008838	Prpf4	100	99.424	ENSOARG00000006319	PRPF4	97	99.424	Ovis_aries
ENSJJAG00000008838	Prpf4	100	99.232	ENSPPAG00000041797	PRPF4	100	99.232	Pan_paniscus
ENSJJAG00000008838	Prpf4	100	99.616	ENSPPRG00000014360	PRPF4	100	99.616	Panthera_pardus
ENSJJAG00000008838	Prpf4	100	99.616	ENSPTIG00000009574	PRPF4	100	99.616	Panthera_tigris_altaica
ENSJJAG00000008838	Prpf4	100	99.232	ENSPTRG00000021274	PRPF4	100	99.042	Pan_troglodytes
ENSJJAG00000008838	Prpf4	100	99.232	ENSPANG00000025776	PRPF4	96	99.232	Papio_anubis
ENSJJAG00000008838	Prpf4	97	80.990	ENSPKIG00000017259	prpf4	99	80.990	Paramormyrops_kingsleyae
ENSJJAG00000008838	Prpf4	100	89.635	ENSPSIG00000010713	PRPF4	91	90.154	Pelodiscus_sinensis
ENSJJAG00000008838	Prpf4	99	58.425	ENSPMGG00000000997	prpf4	99	58.532	Periophthalmus_magnuspinnatus
ENSJJAG00000008838	Prpf4	100	99.232	ENSPEMG00000024115	Prpf4	100	99.232	Peromyscus_maniculatus_bairdii
ENSJJAG00000008838	Prpf4	99	94.942	ENSPCIG00000003821	PRPF4	99	94.942	Phascolarctos_cinereus
ENSJJAG00000008838	Prpf4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSJJAG00000008838	Prpf4	64	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSJJAG00000008838	Prpf4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSJJAG00000008838	Prpf4	98	99.025	ENSPCAG00000002561	PRPF4	99	99.025	Procavia_capensis
ENSJJAG00000008838	Prpf4	100	99.040	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSJJAG00000008838	Prpf4	100	95.402	ENSPVAG00000004708	PRPF4	100	95.402	Pteropus_vampyrus
ENSJJAG00000008838	Prpf4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSJJAG00000008838	Prpf4	97	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSJJAG00000008838	Prpf4	100	99.232	ENSRNOG00000014777	Prpf4	100	99.232	Rattus_norvegicus
ENSJJAG00000008838	Prpf4	100	99.424	ENSRBIG00000040221	PRPF4	100	99.424	Rhinopithecus_bieti
ENSJJAG00000008838	Prpf4	100	99.424	ENSRROG00000040240	PRPF4	100	99.424	Rhinopithecus_roxellana
ENSJJAG00000008838	Prpf4	100	95.411	ENSSHAG00000017658	PRPF4	100	95.411	Sarcophilus_harrisii
ENSJJAG00000008838	Prpf4	97	81.782	ENSSFOG00015008963	prpf4	99	81.782	Scleropages_formosus
ENSJJAG00000008838	Prpf4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSJJAG00000008838	Prpf4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSJJAG00000008838	Prpf4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSJJAG00000008838	Prpf4	100	90.403	ENSSPUG00000015582	PRPF4	100	90.403	Sphenodon_punctatus
ENSJJAG00000008838	Prpf4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSJJAG00000008838	Prpf4	100	99.616	ENSSSCG00000024648	PRPF4	100	99.616	Sus_scrofa
ENSJJAG00000008838	Prpf4	95	90.264	ENSTGUG00000002623	PRPF4	100	90.593	Taeniopygia_guttata
ENSJJAG00000008838	Prpf4	97	75.296	ENSTRUG00000008853	prpf4	99	75.296	Takifugu_rubripes
ENSJJAG00000008838	Prpf4	97	74.653	ENSTNIG00000013250	prpf4	99	74.653	Tetraodon_nigroviridis
ENSJJAG00000008838	Prpf4	100	90.805	ENSTBEG00000000821	PRPF4	100	90.805	Tupaia_belangeri
ENSJJAG00000008838	Prpf4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSJJAG00000008838	Prpf4	66	96.407	ENSUAMG00000018288	PRPF4	90	96.407	Ursus_americanus
ENSJJAG00000008838	Prpf4	100	98.656	ENSUMAG00000019375	PRPF4	100	98.656	Ursus_maritimus
ENSJJAG00000008838	Prpf4	100	98.851	ENSVPAG00000005281	PRPF4	100	98.851	Vicugna_pacos
ENSJJAG00000008838	Prpf4	100	98.286	ENSVVUG00000002476	PRPF4	100	98.286	Vulpes_vulpes
ENSJJAG00000008838	Prpf4	77	62.821	ENSXCOG00000006101	prpf4	93	62.148	Xiphophorus_couchianus
ENSJJAG00000008838	Prpf4	96	67.828	ENSXMAG00000002750	prpf4	98	67.828	Xiphophorus_maculatus