EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000009178 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 1248 bases
Position: chrJH725516.1:11761536-11762783
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000004411	RRM_1	PF00076.22	5.6e-27	1	2
ENSJJAP00000004411	RRM_1	PF00076.22	5.6e-27	2	2
ENSJJAP00000004421	RRM_1	PF00076.22	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000010344	-	936	-	ENSJJAP00000004411	311 (aa)	-	-
ENSJJAT00000010383	-	903	-	ENSJJAP00000004421	300 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000009178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000009178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000009178	-	51	77.436	ENSJJAG00000018392	-	60	77.436
ENSJJAG00000009178	-	89	47.436	ENSJJAG00000022256	-	63	56.250
ENSJJAG00000009178	-	90	72.414	ENSJJAG00000000149	Hnrnpa3	92	77.011
ENSJJAG00000009178	-	87	62.951	ENSJJAG00000001446	-	57	68.116
ENSJJAG00000009178	-	56	37.379	ENSJJAG00000023387	Hnrnpd	62	38.554
ENSJJAG00000009178	-	94	49.254	ENSJJAG00000016030	-	55	61.878
ENSJJAG00000009178	-	92	49.038	ENSJJAG00000012306	-	59	61.272
ENSJJAG00000009178	-	86	77.273	ENSJJAG00000023987	-	69	47.511
ENSJJAG00000009178	-	62	39.024	ENSJJAG00000010643	-	51	39.024
ENSJJAG00000009178	-	94	53.526	ENSJJAG00000017750	-	57	62.983
ENSJJAG00000009178	-	99	71.137	ENSJJAG00000002569	-	83	68.590
ENSJJAG00000009178	-	90	49.664	ENSJJAG00000000423	-	59	62.857
ENSJJAG00000009178	-	50	65.625	ENSJJAG00000002566	-	58	65.556
ENSJJAG00000009178	-	60	53.586	ENSJJAG00000019688	-	70	59.783
ENSJJAG00000009178	-	98	79.868	ENSJJAG00000017527	-	88	77.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000009178	-	89	53.822	ENSAPOG00000019369	-	55	65.193	Acanthochromis_polyacanthus
ENSJJAG00000009178	-	89	52.716	ENSAOCG00000005289	-	54	65.193	Amphiprion_ocellaris
ENSJJAG00000009178	-	89	52.716	ENSAPEG00000004179	-	54	65.193	Amphiprion_percula
ENSJJAG00000009178	-	80	51.228	ENSACLG00000006940	-	54	66.851	Astatotilapia_calliptera
ENSJJAG00000009178	-	89	53.994	ENSCSEG00000007589	hnrnpa1a	67	66.298	Cynoglossus_semilaevis
ENSJJAG00000009178	-	51	43.784	ENSCSEG00000014051	-	73	49.020	Cynoglossus_semilaevis
ENSJJAG00000009178	-	89	50.314	ENSCVAG00000012637	hnrnpa1a	53	66.111	Cyprinodon_variegatus
ENSJJAG00000009178	-	54	62.069	ENSELUG00000007372	-	50	65.556	Esox_lucius
ENSJJAG00000009178	-	83	48.387	ENSGAFG00000007751	-	53	66.111	Gambusia_affinis
ENSJJAG00000009178	-	62	40.376	ENSGAFG00000016803	-	53	43.503	Gambusia_affinis
ENSJJAG00000009178	-	74	45.267	ENSKMAG00000020859	-	54	66.111	Kryptolebias_marmoratus
ENSJJAG00000009178	-	93	71.803	ENSMFAG00000028351	-	88	67.333	Macaca_fascicularis
ENSJJAG00000009178	-	89	52.716	ENSMAMG00000007606	-	53	65.746	Mastacembelus_armatus
ENSJJAG00000009178	-	71	56.809	ENSMALG00000014091	hnrnpa1a	53	65.746	Monopterus_albus
ENSJJAG00000009178	-	60	41.000	ENSNBRG00000018441	-	55	66.851	Neolamprologus_brichardi
ENSJJAG00000009178	-	89	49.704	ENSORLG00015022294	-	55	66.851	Oryzias_latipes_hsok
ENSJJAG00000009178	-	90	52.922	ENSOMEG00000015959	-	55	66.851	Oryzias_melastigma
ENSJJAG00000009178	-	64	57.692	ENSPMGG00000011804	hnrnpa1a	65	70.968	Periophthalmus_magnuspinnatus
ENSJJAG00000009178	-	52	45.989	ENSPMGG00000016392	-	91	51.634	Periophthalmus_magnuspinnatus
ENSJJAG00000009178	-	60	55.072	ENSPNAG00000007752	hnrnpa1a	68	69.079	Pygocentrus_nattereri
ENSJJAG00000009178	-	95	51.807	ENSSPAG00000018518	-	55	65.193	Stegastes_partitus
ENSJJAG00000009178	-	71	55.859	ENSTRUG00000020491	-	55	64.641	Takifugu_rubripes
ENSJJAG00000009178	-	61	32.569	ENSTNIG00000007398	-	68	50.282	Tetraodon_nigroviridis
ENSJJAG00000009178	-	67	56.198	ENSXCOG00000009001	-	78	66.111	Xiphophorus_couchianus
ENSJJAG00000009178	-	63	58.190	ENSXMAG00000008076	-	53	66.111	Xiphophorus_maculatus