EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000009561 (Gene tree)
Gene ID: 101596815
Gene Symbol: Snd1
Alias: Tudor-SN|p100 co-activator
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 487114 bases
Position: chrJH725463.1:28836250-29323363
Accession: 101596815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000004619	TUDOR	PF00567.24	5.1e-28	1	1
ENSJJAP00000004619	SNase	PF00565.17	6.3e-69	1	5
ENSJJAP00000004619	SNase	PF00565.17	6.3e-69	2	5
ENSJJAP00000004619	SNase	PF00565.17	6.3e-69	3	5
ENSJJAP00000004619	SNase	PF00565.17	6.3e-69	4	5
ENSJJAP00000004619	SNase	PF00565.17	6.3e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000010807	-	2733	XM_004658615	ENSJJAP00000004619	910 (aa)	XP_004658672	UPI00033307B4

Gene Model

Click here to download ENSJJAG00000009561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000009561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000009561	Snd1	100	98.681	ENSG00000197157	SND1	100	98.681	Homo_sapiens
ENSJJAG00000009561	Snd1	100	83.772	ENSAPOG00000017599	snd1	99	84.650	Acanthochromis_polyacanthus
ENSJJAG00000009561	Snd1	100	98.465	ENSAMEG00000004664	SND1	94	98.465	Ailuropoda_melanoleuca
ENSJJAG00000009561	Snd1	98	82.083	ENSACIG00000003551	snd1	99	81.960	Amphilophus_citrinellus
ENSJJAG00000009561	Snd1	100	83.553	ENSAOCG00000014166	snd1	99	84.427	Amphiprion_ocellaris
ENSJJAG00000009561	Snd1	100	83.553	ENSAPEG00000007067	snd1	99	84.427	Amphiprion_percula
ENSJJAG00000009561	Snd1	98	82.905	ENSATEG00000018475	snd1	88	84.151	Anabas_testudineus
ENSJJAG00000009561	Snd1	100	98.901	ENSANAG00000034463	SND1	100	98.901	Aotus_nancymaae
ENSJJAG00000009561	Snd1	99	83.077	ENSACLG00000022897	snd1	99	84.076	Astatotilapia_calliptera
ENSJJAG00000009561	Snd1	99	84.158	ENSAMXG00000016318	snd1	98	84.744	Astyanax_mexicanus
ENSJJAG00000009561	Snd1	100	98.901	ENSBTAG00000010692	SND1	100	98.901	Bos_taurus
ENSJJAG00000009561	Snd1	98	46.820	WBGene00006626	tsn-1	98	47.420	Caenorhabditis_elegans
ENSJJAG00000009561	Snd1	100	98.681	ENSCJAG00000017668	SND1	100	98.681	Callithrix_jacchus
ENSJJAG00000009561	Snd1	100	98.901	ENSCAFG00000001700	SND1	100	98.901	Canis_familiaris
ENSJJAG00000009561	Snd1	100	98.901	ENSCAFG00020021639	SND1	100	98.901	Canis_lupus_dingo
ENSJJAG00000009561	Snd1	100	99.231	ENSCHIG00000023390	SND1	100	99.231	Capra_hircus
ENSJJAG00000009561	Snd1	73	98.944	ENSTSYG00000004979	SND1	96	98.944	Carlito_syrichta
ENSJJAG00000009561	Snd1	99	85.000	ENSCAPG00000010677	SND1	98	85.045	Cavia_aperea
ENSJJAG00000009561	Snd1	100	98.352	ENSCPOG00000006251	SND1	100	98.352	Cavia_porcellus
ENSJJAG00000009561	Snd1	100	99.011	ENSCCAG00000036847	SND1	100	99.011	Cebus_capucinus
ENSJJAG00000009561	Snd1	100	98.901	ENSCATG00000035214	SND1	100	98.901	Cercocebus_atys
ENSJJAG00000009561	Snd1	100	98.681	ENSCLAG00000011796	SND1	100	98.681	Chinchilla_lanigera
ENSJJAG00000009561	Snd1	100	98.901	ENSCSAG00000010182	SND1	100	98.901	Chlorocebus_sabaeus
ENSJJAG00000009561	Snd1	78	91.176	ENSCHOG00000002218	SND1	86	91.176	Choloepus_hoffmanni
ENSJJAG00000009561	Snd1	100	91.978	ENSCPBG00000018094	SND1	98	92.937	Chrysemys_picta_bellii
ENSJJAG00000009561	Snd1	98	57.143	ENSCING00000000524	-	98	57.143	Ciona_intestinalis
ENSJJAG00000009561	Snd1	99	57.976	ENSCSAVG00000008807	-	99	58.122	Ciona_savignyi
ENSJJAG00000009561	Snd1	100	98.901	ENSCANG00000035119	SND1	100	98.901	Colobus_angolensis_palliatus
ENSJJAG00000009561	Snd1	100	97.802	ENSCGRG00001022514	Snd1	100	97.802	Cricetulus_griseus_chok1gshd
ENSJJAG00000009561	Snd1	97	97.851	ENSCGRG00000012277	Snd1	99	97.851	Cricetulus_griseus_crigri
ENSJJAG00000009561	Snd1	98	84.228	ENSCSEG00000008661	snd1	98	84.228	Cynoglossus_semilaevis
ENSJJAG00000009561	Snd1	100	83.991	ENSCVAG00000010316	snd1	100	83.678	Cyprinodon_variegatus
ENSJJAG00000009561	Snd1	100	84.228	ENSDARG00000006766	snd1	97	87.230	Danio_rerio
ENSJJAG00000009561	Snd1	97	95.941	ENSDNOG00000006795	SND1	100	95.941	Dasypus_novemcinctus
ENSJJAG00000009561	Snd1	100	98.791	ENSDORG00000000336	Snd1	100	98.791	Dipodomys_ordii
ENSJJAG00000009561	Snd1	98	50.703	FBgn0035121	Tudor-SN	98	50.811	Drosophila_melanogaster
ENSJJAG00000009561	Snd1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSJJAG00000009561	Snd1	60	67.568	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSJJAG00000009561	Snd1	100	97.408	ENSEASG00005008513	SND1	100	97.408	Equus_asinus_asinus
ENSJJAG00000009561	Snd1	100	99.011	ENSECAG00000011451	SND1	100	99.011	Equus_caballus
ENSJJAG00000009561	Snd1	100	86.813	ENSEEUG00000014737	SND1	100	86.813	Erinaceus_europaeus
ENSJJAG00000009561	Snd1	99	82.237	ENSELUG00000001805	snd1	95	83.166	Esox_lucius
ENSJJAG00000009561	Snd1	100	98.901	ENSFCAG00000008289	SND1	100	98.901	Felis_catus
ENSJJAG00000009561	Snd1	100	98.571	ENSFDAG00000015881	SND1	100	98.571	Fukomys_damarensis
ENSJJAG00000009561	Snd1	99	82.093	ENSFHEG00000004093	snd1	97	84.633	Fundulus_heteroclitus
ENSJJAG00000009561	Snd1	64	74.294	ENSGMOG00000018932	snd1	64	74.294	Gadus_morhua
ENSJJAG00000009561	Snd1	100	84.211	ENSGAFG00000008421	snd1	99	85.118	Gambusia_affinis
ENSJJAG00000009561	Snd1	100	54.289	ENSGACG00000019793	snd1	98	54.757	Gasterosteus_aculeatus
ENSJJAG00000009561	Snd1	100	98.901	ENSGGOG00000009614	SND1	100	98.901	Gorilla_gorilla
ENSJJAG00000009561	Snd1	99	83.590	ENSHBUG00000019135	snd1	99	84.076	Haplochromis_burtoni
ENSJJAG00000009561	Snd1	100	98.242	ENSHGLG00000003618	SND1	100	98.242	Heterocephalus_glaber_female
ENSJJAG00000009561	Snd1	99	97.790	ENSHGLG00100012449	SND1	100	97.790	Heterocephalus_glaber_male
ENSJJAG00000009561	Snd1	100	82.675	ENSHCOG00000005266	snd1	98	83.893	Hippocampus_comes
ENSJJAG00000009561	Snd1	100	82.604	ENSIPUG00000013279	snd1	98	83.630	Ictalurus_punctatus
ENSJJAG00000009561	Snd1	100	98.791	ENSSTOG00000002140	SND1	100	98.791	Ictidomys_tridecemlineatus
ENSJJAG00000009561	Snd1	100	83.772	ENSKMAG00000016997	snd1	98	84.787	Kryptolebias_marmoratus
ENSJJAG00000009561	Snd1	100	84.732	ENSLBEG00000013563	snd1	99	83.315	Labrus_bergylta
ENSJJAG00000009561	Snd1	99	85.226	ENSLOCG00000015537	snd1	98	85.226	Lepisosteus_oculatus
ENSJJAG00000009561	Snd1	100	98.132	ENSLAFG00000009696	SND1	100	98.132	Loxodonta_africana
ENSJJAG00000009561	Snd1	100	98.901	ENSMFAG00000038114	SND1	100	98.901	Macaca_fascicularis
ENSJJAG00000009561	Snd1	100	98.901	ENSMMUG00000015432	SND1	100	98.901	Macaca_mulatta
ENSJJAG00000009561	Snd1	100	98.901	ENSMNEG00000039808	SND1	100	98.901	Macaca_nemestrina
ENSJJAG00000009561	Snd1	100	98.791	ENSMLEG00000029040	SND1	100	98.791	Mandrillus_leucophaeus
ENSJJAG00000009561	Snd1	99	83.682	ENSMAMG00000011739	snd1	98	84.375	Mastacembelus_armatus
ENSJJAG00000009561	Snd1	99	83.077	ENSMZEG00005005681	snd1	99	84.076	Maylandia_zebra
ENSJJAG00000009561	Snd1	100	98.681	ENSMICG00000000097	SND1	100	98.681	Microcebus_murinus
ENSJJAG00000009561	Snd1	100	98.462	ENSMOCG00000005040	Snd1	100	98.462	Microtus_ochrogaster
ENSJJAG00000009561	Snd1	100	83.443	ENSMMOG00000001795	snd1	99	84.316	Mola_mola
ENSJJAG00000009561	Snd1	99	95.764	ENSMODG00000015182	SND1	99	95.764	Monodelphis_domestica
ENSJJAG00000009561	Snd1	100	83.224	ENSMALG00000012071	snd1	98	84.040	Monopterus_albus
ENSJJAG00000009561	Snd1	100	98.242	MGP_CAROLIEiJ_G0028159	Snd1	100	98.242	Mus_caroli
ENSJJAG00000009561	Snd1	100	98.022	ENSMUSG00000001424	Snd1	100	98.022	Mus_musculus
ENSJJAG00000009561	Snd1	100	98.242	MGP_PahariEiJ_G0021917	Snd1	100	98.314	Mus_pahari
ENSJJAG00000009561	Snd1	100	98.242	MGP_SPRETEiJ_G0029159	Snd1	100	98.242	Mus_spretus
ENSJJAG00000009561	Snd1	100	98.791	ENSMPUG00000006545	SND1	100	98.791	Mustela_putorius_furo
ENSJJAG00000009561	Snd1	97	96.983	ENSMLUG00000017130	SND1	99	96.983	Myotis_lucifugus
ENSJJAG00000009561	Snd1	100	98.681	ENSNGAG00000011186	Snd1	100	98.681	Nannospalax_galili
ENSJJAG00000009561	Snd1	99	82.967	ENSNBRG00000006681	snd1	99	83.964	Neolamprologus_brichardi
ENSJJAG00000009561	Snd1	100	98.791	ENSNLEG00000012263	SND1	100	98.870	Nomascus_leucogenys
ENSJJAG00000009561	Snd1	91	100.000	ENSOPRG00000013405	SND1	91	100.000	Ochotona_princeps
ENSJJAG00000009561	Snd1	100	98.571	ENSODEG00000011502	SND1	100	98.571	Octodon_degus
ENSJJAG00000009561	Snd1	99	82.967	ENSONIG00000011481	snd1	96	83.964	Oreochromis_niloticus
ENSJJAG00000009561	Snd1	98	94.595	ENSOANG00000000817	SND1	99	93.980	Ornithorhynchus_anatinus
ENSJJAG00000009561	Snd1	100	97.582	ENSOCUG00000001620	SND1	100	97.582	Oryctolagus_cuniculus
ENSJJAG00000009561	Snd1	98	83.799	ENSORLG00000015201	snd1	98	83.799	Oryzias_latipes
ENSJJAG00000009561	Snd1	98	83.911	ENSORLG00020013991	snd1	98	83.911	Oryzias_latipes_hni
ENSJJAG00000009561	Snd1	98	83.911	ENSORLG00015012436	snd1	98	83.911	Oryzias_latipes_hsok
ENSJJAG00000009561	Snd1	100	83.004	ENSOMEG00000006406	snd1	98	84.228	Oryzias_melastigma
ENSJJAG00000009561	Snd1	100	98.575	ENSOGAG00000013356	SND1	94	98.575	Otolemur_garnettii
ENSJJAG00000009561	Snd1	97	96.384	ENSOARG00000002149	SND1	100	96.384	Ovis_aries
ENSJJAG00000009561	Snd1	100	98.791	ENSPPAG00000042947	SND1	100	98.791	Pan_paniscus
ENSJJAG00000009561	Snd1	100	98.901	ENSPPRG00000004494	SND1	100	98.901	Panthera_pardus
ENSJJAG00000009561	Snd1	100	98.791	ENSPTIG00000014214	SND1	100	98.791	Panthera_tigris_altaica
ENSJJAG00000009561	Snd1	100	98.791	ENSPTRG00000023911	SND1	100	98.791	Pan_troglodytes
ENSJJAG00000009561	Snd1	97	98.869	ENSPANG00000011997	SND1	99	98.869	Papio_anubis
ENSJJAG00000009561	Snd1	99	81.477	ENSPKIG00000023494	snd1	98	81.798	Paramormyrops_kingsleyae
ENSJJAG00000009561	Snd1	92	82.994	ENSPMGG00000003629	snd1	100	82.994	Periophthalmus_magnuspinnatus
ENSJJAG00000009561	Snd1	100	98.571	ENSPEMG00000010240	Snd1	100	98.571	Peromyscus_maniculatus_bairdii
ENSJJAG00000009561	Snd1	97	73.672	ENSPMAG00000007915	-	99	73.672	Petromyzon_marinus
ENSJJAG00000009561	Snd1	100	96.264	ENSPCIG00000011561	SND1	100	96.264	Phascolarctos_cinereus
ENSJJAG00000009561	Snd1	100	83.662	ENSPFOG00000001557	snd1	99	84.538	Poecilia_formosa
ENSJJAG00000009561	Snd1	100	83.662	ENSPLAG00000018459	snd1	96	84.538	Poecilia_latipinna
ENSJJAG00000009561	Snd1	100	84.101	ENSPMEG00000006803	snd1	99	84.983	Poecilia_mexicana
ENSJJAG00000009561	Snd1	100	83.991	ENSPREG00000002189	snd1	99	84.872	Poecilia_reticulata
ENSJJAG00000009561	Snd1	93	98.635	ENSPPYG00000017972	SND1	100	98.635	Pongo_abelii
ENSJJAG00000009561	Snd1	100	86.484	ENSPCAG00000011305	SND1	99	86.399	Procavia_capensis
ENSJJAG00000009561	Snd1	100	98.681	ENSPCOG00000026791	SND1	100	98.681	Propithecus_coquereli
ENSJJAG00000009561	Snd1	100	96.923	ENSPVAG00000013945	SND1	100	96.923	Pteropus_vampyrus
ENSJJAG00000009561	Snd1	99	83.077	ENSPNYG00000000932	snd1	99	84.076	Pundamilia_nyererei
ENSJJAG00000009561	Snd1	100	83.589	ENSPNAG00000001206	snd1	98	84.556	Pygocentrus_nattereri
ENSJJAG00000009561	Snd1	99	97.907	ENSRNOG00000031173	Snd1	99	97.907	Rattus_norvegicus
ENSJJAG00000009561	Snd1	73	99.060	ENSRBIG00000027782	-	93	99.240	Rhinopithecus_bieti
ENSJJAG00000009561	Snd1	100	98.901	ENSRROG00000033020	SND1	100	98.901	Rhinopithecus_roxellana
ENSJJAG00000009561	Snd1	100	98.901	ENSSBOG00000032461	SND1	100	98.901	Saimiri_boliviensis_boliviensis
ENSJJAG00000009561	Snd1	98	92.905	ENSSHAG00000015359	SND1	100	92.905	Sarcophilus_harrisii
ENSJJAG00000009561	Snd1	100	82.372	ENSSFOG00015001103	snd1	98	83.463	Scleropages_formosus
ENSJJAG00000009561	Snd1	98	83.893	ENSSMAG00000001932	snd1	93	83.630	Scophthalmus_maximus
ENSJJAG00000009561	Snd1	100	83.553	ENSSDUG00000002699	snd1	92	84.427	Seriola_dumerili
ENSJJAG00000009561	Snd1	100	76.316	ENSSLDG00000001950	snd1	98	77.086	Seriola_lalandi_dorsalis
ENSJJAG00000009561	Snd1	86	99.057	ENSSARG00000004877	SND1	92	99.057	Sorex_araneus
ENSJJAG00000009561	Snd1	73	87.652	ENSSPUG00000017586	SND1	96	87.652	Sphenodon_punctatus
ENSJJAG00000009561	Snd1	73	84.433	ENSSPAG00000021398	snd1	96	86.562	Stegastes_partitus
ENSJJAG00000009561	Snd1	100	98.791	ENSSSCG00000016590	SND1	100	98.791	Sus_scrofa
ENSJJAG00000009561	Snd1	99	82.930	ENSTRUG00000014067	snd1	98	83.445	Takifugu_rubripes
ENSJJAG00000009561	Snd1	100	83.114	ENSTNIG00000011019	snd1	98	84.116	Tetraodon_nigroviridis
ENSJJAG00000009561	Snd1	93	93.042	ENSTBEG00000003999	SND1	100	93.042	Tupaia_belangeri
ENSJJAG00000009561	Snd1	100	94.066	ENSTTRG00000006059	SND1	100	94.066	Tursiops_truncatus
ENSJJAG00000009561	Snd1	91	98.859	ENSUAMG00000005604	-	93	98.859	Ursus_americanus
ENSJJAG00000009561	Snd1	71	89.610	ENSUAMG00000002820	-	86	89.516	Ursus_americanus
ENSJJAG00000009561	Snd1	100	98.681	ENSUMAG00000005960	SND1	100	98.681	Ursus_maritimus
ENSJJAG00000009561	Snd1	77	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSJJAG00000009561	Snd1	100	98.681	ENSVVUG00000007226	SND1	100	98.681	Vulpes_vulpes
ENSJJAG00000009561	Snd1	97	84.972	ENSXETG00000023043	snd1	100	84.897	Xenopus_tropicalis
ENSJJAG00000009561	Snd1	92	81.473	ENSXCOG00000013629	snd1	99	81.473	Xiphophorus_couchianus
ENSJJAG00000009561	Snd1	100	84.211	ENSXMAG00000011469	snd1	99	85.095	Xiphophorus_maculatus