EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000010001 (Gene tree)
Gene ID: 101609800
Gene Symbol: R3hdm2
Alias: 1300003K24Rik
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 70071 bases
Position: chrJH725438.1:9067347-9137417
Accession: 101609800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000005142	R3H	PF01424.22	2e-10	1	1
ENSJJAP00000005130	R3H	PF01424.22	2.1e-10	1	1
ENSJJAP00000005126	R3H	PF01424.22	2.1e-10	1	1
ENSJJAP00000005122	R3H	PF01424.22	2.2e-10	1	1
ENSJJAP00000005137	R3H	PF01424.22	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000011441	-	3345	XM_004650009	ENSJJAP00000005130	974 (aa)	XP_004650066	UPI000333047B
ENSJJAT00000011449	-	3069	XM_004650010	ENSJJAP00000005137	1022 (aa)	XP_004650067	-
ENSJJAT00000011432	-	3580	XM_004650006	ENSJJAP00000005122	1040 (aa)	XP_004650063	UPI000332EFD9
ENSJJAT00000011454	-	2910	-	ENSJJAP00000005142	969 (aa)	-	-
ENSJJAT00000011436	-	3475	XM_004650007	ENSJJAP00000005126	1008 (aa)	XP_004650064	UPI000333074D

Gene Model

Click here to download ENSJJAG00000010001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000010001	R3hdm2	61	50.743	ENSJJAG00000018847	Arpp21	94	45.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000010001	R3hdm2	100	96.436	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSJJAG00000010001	R3hdm2	99	65.133	ENSAPOG00000020341	r3hdm2	99	65.434	Acanthochromis_polyacanthus
ENSJJAG00000010001	R3hdm2	62	36.018	ENSAPOG00000021873	-	92	35.359	Acanthochromis_polyacanthus
ENSJJAG00000010001	R3hdm2	100	94.837	ENSAMEG00000004812	R3HDM2	100	95.411	Ailuropoda_melanoleuca
ENSJJAG00000010001	R3hdm2	93	65.987	ENSACIG00000016146	r3hdm2	98	66.131	Amphilophus_citrinellus
ENSJJAG00000010001	R3hdm2	99	65.041	ENSAOCG00000023694	r3hdm2	99	65.285	Amphiprion_ocellaris
ENSJJAG00000010001	R3hdm2	64	37.374	ENSAOCG00000003840	-	93	36.153	Amphiprion_ocellaris
ENSJJAG00000010001	R3hdm2	99	64.986	ENSAPEG00000008851	r3hdm2	100	67.745	Amphiprion_percula
ENSJJAG00000010001	R3hdm2	64	36.797	ENSAPEG00000014325	-	91	36.364	Amphiprion_percula
ENSJJAG00000010001	R3hdm2	99	61.682	ENSATEG00000025024	r3hdm2	100	65.020	Anabas_testudineus
ENSJJAG00000010001	R3hdm2	100	79.373	ENSACAG00000006388	R3HDM2	100	79.373	Anolis_carolinensis
ENSJJAG00000010001	R3hdm2	98	90.292	ENSANAG00000031310	-	100	89.770	Aotus_nancymaae
ENSJJAG00000010001	R3hdm2	100	96.139	ENSANAG00000025397	-	100	96.139	Aotus_nancymaae
ENSJJAG00000010001	R3hdm2	99	64.495	ENSACLG00000019106	r3hdm2	99	65.746	Astatotilapia_calliptera
ENSJJAG00000010001	R3hdm2	94	61.181	ENSAMXG00000017180	r3hdm2	99	62.474	Astyanax_mexicanus
ENSJJAG00000010001	R3hdm2	100	92.383	ENSBTAG00000018361	R3HDM2	100	92.285	Bos_taurus
ENSJJAG00000010001	R3hdm2	100	95.842	ENSCJAG00000007365	R3HDM2	100	95.743	Callithrix_jacchus
ENSJJAG00000010001	R3hdm2	100	95.450	ENSCAFG00000000215	R3HDM2	100	95.648	Canis_familiaris
ENSJJAG00000010001	R3hdm2	100	93.672	ENSCAFG00020023713	R3HDM2	100	93.966	Canis_lupus_dingo
ENSJJAG00000010001	R3hdm2	100	94.172	ENSCHIG00000014022	R3HDM2	100	93.661	Capra_hircus
ENSJJAG00000010001	R3hdm2	100	94.659	ENSTSYG00000001449	R3HDM2	100	94.263	Carlito_syrichta
ENSJJAG00000010001	R3hdm2	100	93.359	ENSCPOG00000009217	R3HDM2	100	93.262	Cavia_porcellus
ENSJJAG00000010001	R3hdm2	89	95.875	ENSCCAG00000026083	R3HDM2	97	95.764	Cebus_capucinus
ENSJJAG00000010001	R3hdm2	100	96.238	ENSCATG00000036929	R3HDM2	100	96.238	Cercocebus_atys
ENSJJAG00000010001	R3hdm2	100	94.450	ENSCLAG00000011997	R3HDM2	100	94.067	Chinchilla_lanigera
ENSJJAG00000010001	R3hdm2	100	96.012	ENSCSAG00000004911	R3HDM2	100	96.012	Chlorocebus_sabaeus
ENSJJAG00000010001	R3hdm2	76	91.400	ENSCHOG00000005636	R3HDM2	91	91.400	Choloepus_hoffmanni
ENSJJAG00000010001	R3hdm2	100	79.925	ENSCPBG00000013922	R3HDM2	100	80.690	Chrysemys_picta_bellii
ENSJJAG00000010001	R3hdm2	100	95.050	ENSCANG00000043807	R3HDM2	100	94.554	Colobus_angolensis_palliatus
ENSJJAG00000010001	R3hdm2	100	93.589	ENSCGRG00001017324	R3hdm2	100	93.397	Cricetulus_griseus_chok1gshd
ENSJJAG00000010001	R3hdm2	100	94.076	ENSCGRG00000003862	R3hdm2	100	93.871	Cricetulus_griseus_crigri
ENSJJAG00000010001	R3hdm2	96	66.284	ENSCSEG00000010925	r3hdm2	100	65.581	Cynoglossus_semilaevis
ENSJJAG00000010001	R3hdm2	96	65.150	ENSCVAG00000009058	r3hdm2	100	64.078	Cyprinodon_variegatus
ENSJJAG00000010001	R3hdm2	93	63.515	ENSDARG00000102610	r3hdm2	99	64.579	Danio_rerio
ENSJJAG00000010001	R3hdm2	100	94.482	ENSDNOG00000015033	R3HDM2	100	94.098	Dasypus_novemcinctus
ENSJJAG00000010001	R3hdm2	94	95.870	ENSDORG00000011462	R3hdm2	99	95.435	Dipodomys_ordii
ENSJJAG00000010001	R3hdm2	100	95.498	ENSEASG00005007091	R3HDM2	100	95.115	Equus_asinus_asinus
ENSJJAG00000010001	R3hdm2	100	95.681	ENSECAG00000003157	R3HDM2	100	95.585	Equus_caballus
ENSJJAG00000010001	R3hdm2	98	62.943	ENSELUG00000015969	r3hdm2	98	64.507	Esox_lucius
ENSJJAG00000010001	R3hdm2	100	95.398	ENSFCAG00000000192	R3HDM2	99	95.308	Felis_catus
ENSJJAG00000010001	R3hdm2	89	80.645	ENSFALG00000000255	R3HDM2	100	80.645	Ficedula_albicollis
ENSJJAG00000010001	R3hdm2	100	94.078	ENSFDAG00000019385	R3HDM2	100	93.792	Fukomys_damarensis
ENSJJAG00000010001	R3hdm2	99	62.455	ENSFHEG00000016484	r3hdm2	99	64.391	Fundulus_heteroclitus
ENSJJAG00000010001	R3hdm2	62	35.493	ENSFHEG00000007936	-	88	34.498	Fundulus_heteroclitus
ENSJJAG00000010001	R3hdm2	95	65.222	ENSGMOG00000007961	r3hdm2	100	64.631	Gadus_morhua
ENSJJAG00000010001	R3hdm2	100	78.947	ENSGALG00000043736	R3HDM2	100	78.768	Gallus_gallus
ENSJJAG00000010001	R3hdm2	99	65.189	ENSGAFG00000013887	r3hdm2	100	64.842	Gambusia_affinis
ENSJJAG00000010001	R3hdm2	62	36.530	ENSGAFG00000015558	-	88	35.285	Gambusia_affinis
ENSJJAG00000010001	R3hdm2	95	67.485	ENSGACG00000006442	r3hdm2	100	68.473	Gasterosteus_aculeatus
ENSJJAG00000010001	R3hdm2	100	79.944	ENSGAGG00000017797	R3HDM2	99	80.504	Gopherus_agassizii
ENSJJAG00000010001	R3hdm2	100	96.337	ENSGGOG00000015007	R3HDM2	100	96.337	Gorilla_gorilla
ENSJJAG00000010001	R3hdm2	68	35.142	ENSHBUG00000018525	-	94	35.215	Haplochromis_burtoni
ENSJJAG00000010001	R3hdm2	100	94.828	ENSHGLG00000010434	-	100	94.540	Heterocephalus_glaber_female
ENSJJAG00000010001	R3hdm2	88	85.069	ENSHGLG00000010421	-	97	84.606	Heterocephalus_glaber_female
ENSJJAG00000010001	R3hdm2	100	94.732	ENSHGLG00100004183	-	100	94.444	Heterocephalus_glaber_male
ENSJJAG00000010001	R3hdm2	96	82.070	ENSHGLG00100018871	-	99	81.644	Heterocephalus_glaber_male
ENSJJAG00000010001	R3hdm2	99	63.343	ENSHCOG00000001142	r3hdm2	96	64.491	Hippocampus_comes
ENSJJAG00000010001	R3hdm2	99	62.570	ENSIPUG00000023873	r3hdm2	99	63.850	Ictalurus_punctatus
ENSJJAG00000010001	R3hdm2	100	95.277	ENSSTOG00000013424	R3HDM2	100	94.764	Ictidomys_tridecemlineatus
ENSJJAG00000010001	R3hdm2	67	34.254	ENSKMAG00000004052	-	94	33.891	Kryptolebias_marmoratus
ENSJJAG00000010001	R3hdm2	97	65.660	ENSKMAG00000012695	r3hdm2	99	65.306	Kryptolebias_marmoratus
ENSJJAG00000010001	R3hdm2	52	39.572	ENSLBEG00000002779	-	88	37.582	Labrus_bergylta
ENSJJAG00000010001	R3hdm2	99	64.510	ENSLBEG00000013115	r3hdm2	96	64.312	Labrus_bergylta
ENSJJAG00000010001	R3hdm2	95	73.212	ENSLACG00000019064	r3hdm2	100	73.112	Latimeria_chalumnae
ENSJJAG00000010001	R3hdm2	100	68.571	ENSLOCG00000005976	r3hdm2	100	69.048	Lepisosteus_oculatus
ENSJJAG00000010001	R3hdm2	100	93.678	ENSLAFG00000006510	R3HDM2	100	93.199	Loxodonta_africana
ENSJJAG00000010001	R3hdm2	100	96.111	ENSMFAG00000036385	R3HDM2	100	96.111	Macaca_fascicularis
ENSJJAG00000010001	R3hdm2	100	96.357	ENSMMUG00000021789	R3HDM2	100	96.357	Macaca_mulatta
ENSJJAG00000010001	R3hdm2	100	96.146	ENSMNEG00000025314	R3HDM2	100	96.146	Macaca_nemestrina
ENSJJAG00000010001	R3hdm2	100	96.337	ENSMLEG00000028915	R3HDM2	100	96.337	Mandrillus_leucophaeus
ENSJJAG00000010001	R3hdm2	67	34.801	ENSMAMG00000011755	-	94	34.371	Mastacembelus_armatus
ENSJJAG00000010001	R3hdm2	99	64.305	ENSMAMG00000009793	r3hdm2	99	64.489	Mastacembelus_armatus
ENSJJAG00000010001	R3hdm2	99	64.495	ENSMZEG00005007319	r3hdm2	99	65.746	Maylandia_zebra
ENSJJAG00000010001	R3hdm2	100	95.567	ENSMICG00000012389	R3HDM2	100	95.172	Microcebus_murinus
ENSJJAG00000010001	R3hdm2	100	94.151	ENSMOCG00000014425	R3hdm2	100	94.056	Microtus_ochrogaster
ENSJJAG00000010001	R3hdm2	94	67.519	ENSMMOG00000007448	r3hdm2	99	67.058	Mola_mola
ENSJJAG00000010001	R3hdm2	84	76.825	ENSMALG00000010211	r3hdm2	98	62.701	Monopterus_albus
ENSJJAG00000010001	R3hdm2	100	94.737	MGP_CAROLIEiJ_G0015896	R3hdm2	100	94.354	Mus_caroli
ENSJJAG00000010001	R3hdm2	100	95.019	ENSMUSG00000025404	R3hdm2	100	94.540	Mus_musculus
ENSJJAG00000010001	R3hdm2	100	94.626	MGP_PahariEiJ_G0031189	R3hdm2	100	94.722	Mus_pahari
ENSJJAG00000010001	R3hdm2	100	94.646	MGP_SPRETEiJ_G0016722	R3hdm2	100	94.264	Mus_spretus
ENSJJAG00000010001	R3hdm2	98	93.184	ENSMPUG00000001818	R3HDM2	97	93.476	Mustela_putorius_furo
ENSJJAG00000010001	R3hdm2	100	95.010	ENSMLUG00000004980	R3HDM2	100	95.010	Myotis_lucifugus
ENSJJAG00000010001	R3hdm2	100	96.065	ENSNGAG00000018800	R3hdm2	100	95.969	Nannospalax_galili
ENSJJAG00000010001	R3hdm2	94	65.106	ENSNBRG00000004483	r3hdm2	99	66.774	Neolamprologus_brichardi
ENSJJAG00000010001	R3hdm2	100	96.139	ENSNLEG00000017351	R3HDM2	100	96.139	Nomascus_leucogenys
ENSJJAG00000010001	R3hdm2	99	80.537	ENSMEUG00000008588	R3HDM2	100	80.058	Notamacropus_eugenii
ENSJJAG00000010001	R3hdm2	100	87.922	ENSOPRG00000013670	R3HDM2	100	87.718	Ochotona_princeps
ENSJJAG00000010001	R3hdm2	99	63.153	ENSONIG00000005075	r3hdm2	99	63.783	Oreochromis_niloticus
ENSJJAG00000010001	R3hdm2	68	35.637	ENSONIG00000002315	-	94	35.414	Oreochromis_niloticus
ENSJJAG00000010001	R3hdm2	100	94.752	ENSOCUG00000013258	R3HDM2	100	94.370	Oryctolagus_cuniculus
ENSJJAG00000010001	R3hdm2	99	64.345	ENSORLG00000005502	r3hdm2	99	64.810	Oryzias_latipes
ENSJJAG00000010001	R3hdm2	99	64.160	ENSORLG00020017069	r3hdm2	99	64.624	Oryzias_latipes_hni
ENSJJAG00000010001	R3hdm2	99	64.253	ENSORLG00015012735	r3hdm2	99	64.717	Oryzias_latipes_hsok
ENSJJAG00000010001	R3hdm2	63	33.627	ENSOMEG00000009631	-	97	32.289	Oryzias_melastigma
ENSJJAG00000010001	R3hdm2	63	33.627	ENSOMEG00000016256	-	97	32.289	Oryzias_melastigma
ENSJJAG00000010001	R3hdm2	99	60.905	ENSOMEG00000018079	r3hdm2	99	62.072	Oryzias_melastigma
ENSJJAG00000010001	R3hdm2	96	79.171	ENSOGAG00000027966	-	99	78.600	Otolemur_garnettii
ENSJJAG00000010001	R3hdm2	100	95.257	ENSOGAG00000012055	R3HDM2	100	94.763	Otolemur_garnettii
ENSJJAG00000010001	R3hdm2	100	91.626	ENSOARG00000006929	R3HDM2	100	91.529	Ovis_aries
ENSJJAG00000010001	R3hdm2	100	96.436	ENSPPAG00000034395	R3HDM2	100	96.436	Pan_paniscus
ENSJJAG00000010001	R3hdm2	100	95.252	ENSPPRG00000009240	R3HDM2	100	95.450	Panthera_pardus
ENSJJAG00000010001	R3hdm2	100	95.252	ENSPTIG00000008752	R3HDM2	100	95.450	Panthera_tigris_altaica
ENSJJAG00000010001	R3hdm2	100	96.213	ENSPTRG00000046457	R3HDM2	100	96.213	Pan_troglodytes
ENSJJAG00000010001	R3hdm2	98	95.161	ENSPANG00000024002	R3HDM2	100	95.161	Papio_anubis
ENSJJAG00000010001	R3hdm2	95	68.869	ENSPKIG00000003171	r3hdm2	99	67.469	Paramormyrops_kingsleyae
ENSJJAG00000010001	R3hdm2	65	69.552	ENSPSIG00000006954	R3HDM2	100	70.149	Pelodiscus_sinensis
ENSJJAG00000010001	R3hdm2	93	66.413	ENSPMGG00000007061	r3hdm2	99	66.219	Periophthalmus_magnuspinnatus
ENSJJAG00000010001	R3hdm2	100	94.056	ENSPEMG00000015964	R3hdm2	100	94.056	Peromyscus_maniculatus_bairdii
ENSJJAG00000010001	R3hdm2	100	88.944	ENSPCIG00000023841	R3HDM2	100	88.549	Phascolarctos_cinereus
ENSJJAG00000010001	R3hdm2	62	35.789	ENSPFOG00000008096	-	91	34.375	Poecilia_formosa
ENSJJAG00000010001	R3hdm2	94	71.758	ENSPFOG00000006077	r3hdm2	95	71.758	Poecilia_formosa
ENSJJAG00000010001	R3hdm2	62	35.489	ENSPLAG00000006973	-	91	34.091	Poecilia_latipinna
ENSJJAG00000010001	R3hdm2	99	64.353	ENSPLAG00000002971	r3hdm2	99	64.574	Poecilia_latipinna
ENSJJAG00000010001	R3hdm2	99	64.353	ENSPMEG00000005330	r3hdm2	99	64.574	Poecilia_mexicana
ENSJJAG00000010001	R3hdm2	62	35.789	ENSPMEG00000014457	-	91	34.820	Poecilia_mexicana
ENSJJAG00000010001	R3hdm2	99	64.444	ENSPREG00000008424	r3hdm2	99	64.662	Poecilia_reticulata
ENSJJAG00000010001	R3hdm2	98	92.887	ENSPPYG00000004685	R3HDM2	81	92.396	Pongo_abelii
ENSJJAG00000010001	R3hdm2	95	86.018	ENSPCAG00000014642	R3HDM2	100	86.018	Procavia_capensis
ENSJJAG00000010001	R3hdm2	100	95.945	ENSPCOG00000013201	R3HDM2	100	95.945	Propithecus_coquereli
ENSJJAG00000010001	R3hdm2	100	95.298	ENSPVAG00000003967	R3HDM2	100	95.202	Pteropus_vampyrus
ENSJJAG00000010001	R3hdm2	94	62.048	ENSPNYG00000013479	r3hdm2	100	63.323	Pundamilia_nyererei
ENSJJAG00000010001	R3hdm2	99	63.704	ENSPNAG00000017473	r3hdm2	99	64.469	Pygocentrus_nattereri
ENSJJAG00000010001	R3hdm2	100	93.780	ENSRNOG00000007801	R3hdm2	100	93.301	Rattus_norvegicus
ENSJJAG00000010001	R3hdm2	100	93.663	ENSRBIG00000037403	R3HDM2	100	93.267	Rhinopithecus_bieti
ENSJJAG00000010001	R3hdm2	100	96.449	ENSRROG00000022271	R3HDM2	100	96.337	Rhinopithecus_roxellana
ENSJJAG00000010001	R3hdm2	100	96.139	ENSSBOG00000023547	R3HDM2	100	96.139	Saimiri_boliviensis_boliviensis
ENSJJAG00000010001	R3hdm2	100	86.450	ENSSHAG00000003511	R3HDM2	100	86.260	Sarcophilus_harrisii
ENSJJAG00000010001	R3hdm2	94	67.449	ENSSFOG00015011219	r3hdm2	99	67.229	Scleropages_formosus
ENSJJAG00000010001	R3hdm2	99	64.837	ENSSMAG00000012073	r3hdm2	100	65.846	Scophthalmus_maximus
ENSJJAG00000010001	R3hdm2	64	36.442	ENSSDUG00000009188	-	92	35.694	Seriola_dumerili
ENSJJAG00000010001	R3hdm2	99	65.478	ENSSDUG00000019269	r3hdm2	100	65.848	Seriola_dumerili
ENSJJAG00000010001	R3hdm2	99	65.619	ENSSLDG00000005252	r3hdm2	100	65.989	Seriola_lalandi_dorsalis
ENSJJAG00000010001	R3hdm2	90	88.930	ENSSARG00000003958	R3HDM2	94	88.930	Sorex_araneus
ENSJJAG00000010001	R3hdm2	100	74.835	ENSSPUG00000014132	R3HDM2	100	74.929	Sphenodon_punctatus
ENSJJAG00000010001	R3hdm2	99	64.855	ENSSPAG00000022594	r3hdm2	100	66.955	Stegastes_partitus
ENSJJAG00000010001	R3hdm2	63	34.783	ENSSPAG00000016856	-	94	35.270	Stegastes_partitus
ENSJJAG00000010001	R3hdm2	100	93.648	ENSSSCG00000026498	R3HDM2	100	95.189	Sus_scrofa
ENSJJAG00000010001	R3hdm2	73	80.183	ENSTGUG00000015881	R3HDM2	100	80.183	Taeniopygia_guttata
ENSJJAG00000010001	R3hdm2	94	63.770	ENSTRUG00000015075	r3hdm2	99	65.268	Takifugu_rubripes
ENSJJAG00000010001	R3hdm2	87	82.184	ENSTNIG00000007057	r3hdm2	99	62.991	Tetraodon_nigroviridis
ENSJJAG00000010001	R3hdm2	81	94.982	ENSTBEG00000015967	R3HDM2	81	94.982	Tupaia_belangeri
ENSJJAG00000010001	R3hdm2	100	81.478	ENSTTRG00000013082	R3HDM2	95	95.376	Tursiops_truncatus
ENSJJAG00000010001	R3hdm2	100	95.122	ENSUAMG00000020913	R3HDM2	100	95.707	Ursus_americanus
ENSJJAG00000010001	R3hdm2	100	89.016	ENSUMAG00000019179	R3HDM2	100	89.780	Ursus_maritimus
ENSJJAG00000010001	R3hdm2	100	89.155	ENSVPAG00000008656	R3HDM2	100	89.155	Vicugna_pacos
ENSJJAG00000010001	R3hdm2	98	95.312	ENSVVUG00000018014	R3HDM2	97	95.508	Vulpes_vulpes
ENSJJAG00000010001	R3hdm2	100	73.289	ENSXETG00000017153	r3hdm2	100	72.624	Xenopus_tropicalis
ENSJJAG00000010001	R3hdm2	86	63.451	ENSXCOG00000013882	r3hdm2	100	64.196	Xiphophorus_couchianus
ENSJJAG00000010001	R3hdm2	62	36.241	ENSXMAG00000002994	-	88	35.015	Xiphophorus_maculatus
ENSJJAG00000010001	R3hdm2	99	64.576	ENSXMAG00000017978	r3hdm2	100	64.424	Xiphophorus_maculatus