EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000010203 (Gene tree)
Gene ID: 101617912
Gene Symbol: Rnpc3
Alias: 2810441O16Rik|C030014B17Rik
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 19123 bases
Position: chrJH725465.1:9353727-9372849
Accession: 101617912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000005306	RRM_1	PF00076.22	4e-18	1	2
ENSJJAP00000005306	RRM_1	PF00076.22	4e-18	2	2
ENSJJAP00000005294	RRM_1	PF00076.22	5.3e-18	1	2
ENSJJAP00000005294	RRM_1	PF00076.22	5.3e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000011655	-	1389	-	ENSJJAP00000005306	462 (aa)	-	-
ENSJJAT00000011640	-	1539	XM_004659071	ENSJJAP00000005294	512 (aa)	XP_004659128	UPI0003331CFC

Gene Model

Click here to download ENSJJAG00000010203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000010203	Rnpc3	100	88.953	ENSG00000185946	RNPC3	100	91.304	Homo_sapiens
ENSJJAG00000010203	Rnpc3	96	55.984	ENSAPOG00000017371	rnpc3	96	56.237	Acanthochromis_polyacanthus
ENSJJAG00000010203	Rnpc3	99	88.386	ENSAMEG00000001694	RNPC3	99	85.934	Ailuropoda_melanoleuca
ENSJJAG00000010203	Rnpc3	96	52.495	ENSACIG00000021043	rnpc3	97	52.314	Amphilophus_citrinellus
ENSJJAG00000010203	Rnpc3	96	55.622	ENSAOCG00000014052	rnpc3	95	55.870	Amphiprion_ocellaris
ENSJJAG00000010203	Rnpc3	96	55.422	ENSAPEG00000008739	rnpc3	95	55.668	Amphiprion_percula
ENSJJAG00000010203	Rnpc3	96	54.150	ENSATEG00000021263	rnpc3	97	54.509	Anabas_testudineus
ENSJJAG00000010203	Rnpc3	88	68.874	ENSAPLG00000015605	RNPC3	99	68.653	Anas_platyrhynchos
ENSJJAG00000010203	Rnpc3	97	65.669	ENSACAG00000002029	RNPC3	95	66.870	Anolis_carolinensis
ENSJJAG00000010203	Rnpc3	100	88.178	ENSANAG00000019950	RNPC3	99	88.178	Aotus_nancymaae
ENSJJAG00000010203	Rnpc3	95	52.857	ENSACLG00000014702	rnpc3	96	52.857	Astatotilapia_calliptera
ENSJJAG00000010203	Rnpc3	95	57.347	ENSAMXG00000033372	rnpc3	96	57.347	Astyanax_mexicanus
ENSJJAG00000010203	Rnpc3	100	89.341	ENSBTAG00000019091	RNPC3	99	88.372	Bos_taurus
ENSJJAG00000010203	Rnpc3	100	84.109	ENSCJAG00000035686	RNPC3	99	83.527	Callithrix_jacchus
ENSJJAG00000010203	Rnpc3	100	87.234	ENSCAFG00000019972	RNPC3	99	85.687	Canis_familiaris
ENSJJAG00000010203	Rnpc3	100	87.234	ENSCAFG00020011300	RNPC3	99	85.687	Canis_lupus_dingo
ENSJJAG00000010203	Rnpc3	100	89.147	ENSCHIG00000020361	RNPC3	99	88.372	Capra_hircus
ENSJJAG00000010203	Rnpc3	100	87.016	ENSTSYG00000030256	RNPC3	99	86.240	Carlito_syrichta
ENSJJAG00000010203	Rnpc3	85	75.286	ENSCAPG00000013600	RNPC3	97	75.174	Cavia_aperea
ENSJJAG00000010203	Rnpc3	100	86.240	ENSCPOG00000031638	RNPC3	99	85.271	Cavia_porcellus
ENSJJAG00000010203	Rnpc3	100	88.178	ENSCCAG00000024301	RNPC3	99	87.403	Cebus_capucinus
ENSJJAG00000010203	Rnpc3	98	67.129	ENSCATG00000035930	-	95	65.580	Cercocebus_atys
ENSJJAG00000010203	Rnpc3	99	88.738	ENSCATG00000002086	RNPC3	99	87.767	Cercocebus_atys
ENSJJAG00000010203	Rnpc3	100	84.109	ENSCLAG00000005169	RNPC3	99	84.496	Chinchilla_lanigera
ENSJJAG00000010203	Rnpc3	99	88.544	ENSCSAG00000001519	RNPC3	99	87.573	Chlorocebus_sabaeus
ENSJJAG00000010203	Rnpc3	100	66.538	ENSCPBG00000028311	RNPC3	95	68.826	Chrysemys_picta_bellii
ENSJJAG00000010203	Rnpc3	95	36.905	ENSCING00000021276	-	98	37.374	Ciona_intestinalis
ENSJJAG00000010203	Rnpc3	93	36.907	ENSCSAVG00000002800	-	77	53.333	Ciona_savignyi
ENSJJAG00000010203	Rnpc3	99	88.350	ENSCANG00000031444	RNPC3	99	87.379	Colobus_angolensis_palliatus
ENSJJAG00000010203	Rnpc3	100	87.791	ENSCGRG00001019276	Rnpc3	100	86.628	Cricetulus_griseus_chok1gshd
ENSJJAG00000010203	Rnpc3	88	87.832	ENSCGRG00000000053	Rnpc3	100	87.832	Cricetulus_griseus_crigri
ENSJJAG00000010203	Rnpc3	95	53.988	ENSCSEG00000013475	rnpc3	96	53.768	Cynoglossus_semilaevis
ENSJJAG00000010203	Rnpc3	97	52.510	ENSCVAG00000002645	rnpc3	97	53.033	Cyprinodon_variegatus
ENSJJAG00000010203	Rnpc3	96	56.287	ENSDARG00000011247	rnpc3	97	57.143	Danio_rerio
ENSJJAG00000010203	Rnpc3	100	86.822	ENSDNOG00000047498	-	99	86.822	Dasypus_novemcinctus
ENSJJAG00000010203	Rnpc3	100	86.822	ENSDNOG00000044555	-	99	86.822	Dasypus_novemcinctus
ENSJJAG00000010203	Rnpc3	100	87.984	ENSDORG00000027343	Rnpc3	99	87.016	Dipodomys_ordii
ENSJJAG00000010203	Rnpc3	95	47.741	ENSEBUG00000002068	rnpc3	97	48.221	Eptatretus_burgeri
ENSJJAG00000010203	Rnpc3	100	87.427	ENSEASG00005015957	RNPC3	99	85.880	Equus_asinus_asinus
ENSJJAG00000010203	Rnpc3	100	87.814	ENSECAG00000021148	RNPC3	99	86.267	Equus_caballus
ENSJJAG00000010203	Rnpc3	96	53.295	ENSELUG00000002264	rnpc3	96	50.867	Esox_lucius
ENSJJAG00000010203	Rnpc3	100	88.008	ENSFCAG00000024312	RNPC3	99	87.621	Felis_catus
ENSJJAG00000010203	Rnpc3	88	71.302	ENSFALG00000002580	RNPC3	99	70.813	Ficedula_albicollis
ENSJJAG00000010203	Rnpc3	100	87.209	ENSFDAG00000019948	RNPC3	100	86.240	Fukomys_damarensis
ENSJJAG00000010203	Rnpc3	95	51.025	ENSFHEG00000020647	rnpc3	96	49.602	Fundulus_heteroclitus
ENSJJAG00000010203	Rnpc3	95	54.158	ENSGMOG00000019213	rnpc3	95	52.761	Gadus_morhua
ENSJJAG00000010203	Rnpc3	96	70.648	ENSGALG00000005162	RNPC3	88	70.265	Gallus_gallus
ENSJJAG00000010203	Rnpc3	96	53.175	ENSGAFG00000017236	rnpc3	96	53.307	Gambusia_affinis
ENSJJAG00000010203	Rnpc3	95	55.010	ENSGACG00000002048	rnpc3	96	54.473	Gasterosteus_aculeatus
ENSJJAG00000010203	Rnpc3	96	68.813	ENSGAGG00000008438	RNPC3	94	68.623	Gopherus_agassizii
ENSJJAG00000010203	Rnpc3	99	72.461	ENSGGOG00000026201	-	94	74.642	Gorilla_gorilla
ENSJJAG00000010203	Rnpc3	79	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSJJAG00000010203	Rnpc3	100	87.984	ENSHGLG00000001708	RNPC3	99	87.209	Heterocephalus_glaber_female
ENSJJAG00000010203	Rnpc3	100	87.984	ENSHGLG00100003005	RNPC3	99	87.209	Heterocephalus_glaber_male
ENSJJAG00000010203	Rnpc3	96	54.049	ENSHCOG00000017135	rnpc3	97	54.065	Hippocampus_comes
ENSJJAG00000010203	Rnpc3	95	57.172	ENSIPUG00000002916	rnpc3	97	56.313	Ictalurus_punctatus
ENSJJAG00000010203	Rnpc3	100	88.566	ENSSTOG00000025020	RNPC3	99	87.597	Ictidomys_tridecemlineatus
ENSJJAG00000010203	Rnpc3	96	53.659	ENSKMAG00000017358	rnpc3	97	52.695	Kryptolebias_marmoratus
ENSJJAG00000010203	Rnpc3	96	54.949	ENSLBEG00000024901	rnpc3	95	55.193	Labrus_bergylta
ENSJJAG00000010203	Rnpc3	95	60.852	ENSLACG00000005720	RNPC3	90	61.460	Latimeria_chalumnae
ENSJJAG00000010203	Rnpc3	96	59.394	ENSLOCG00000007986	rnpc3	96	60.081	Lepisosteus_oculatus
ENSJJAG00000010203	Rnpc3	100	85.465	ENSLAFG00000032342	RNPC3	100	85.465	Loxodonta_africana
ENSJJAG00000010203	Rnpc3	99	88.544	ENSMFAG00000002004	RNPC3	99	87.573	Macaca_fascicularis
ENSJJAG00000010203	Rnpc3	98	65.209	ENSMFAG00000002917	-	94	65.031	Macaca_fascicularis
ENSJJAG00000010203	Rnpc3	98	65.652	ENSMMUG00000002098	-	87	80.841	Macaca_mulatta
ENSJJAG00000010203	Rnpc3	99	88.544	ENSMMUG00000018039	RNPC3	99	87.573	Macaca_mulatta
ENSJJAG00000010203	Rnpc3	98	60.672	ENSMNEG00000029209	-	95	62.805	Macaca_nemestrina
ENSJJAG00000010203	Rnpc3	99	84.272	ENSMNEG00000033950	RNPC3	99	83.301	Macaca_nemestrina
ENSJJAG00000010203	Rnpc3	98	66.341	ENSMLEG00000034644	-	95	65.000	Mandrillus_leucophaeus
ENSJJAG00000010203	Rnpc3	99	88.738	ENSMLEG00000033628	RNPC3	99	87.767	Mandrillus_leucophaeus
ENSJJAG00000010203	Rnpc3	96	51.200	ENSMAMG00000007496	rnpc3	96	50.295	Mastacembelus_armatus
ENSJJAG00000010203	Rnpc3	95	52.390	ENSMZEG00005020233	rnpc3	97	52.485	Maylandia_zebra
ENSJJAG00000010203	Rnpc3	88	69.824	ENSMGAG00000006381	RNPC3	99	69.604	Meleagris_gallopavo
ENSJJAG00000010203	Rnpc3	97	88.755	ENSMAUG00000001358	Rnpc3	100	86.796	Mesocricetus_auratus
ENSJJAG00000010203	Rnpc3	100	88.953	ENSMICG00000029591	RNPC3	99	87.984	Microcebus_murinus
ENSJJAG00000010203	Rnpc3	97	88.400	ENSMOCG00000013423	Rnpc3	100	87.259	Microtus_ochrogaster
ENSJJAG00000010203	Rnpc3	96	50.509	ENSMMOG00000005309	rnpc3	96	50.505	Mola_mola
ENSJJAG00000010203	Rnpc3	100	76.117	ENSMODG00000002946	RNPC3	99	76.117	Monodelphis_domestica
ENSJJAG00000010203	Rnpc3	96	53.187	ENSMALG00000015471	rnpc3	97	53.737	Monopterus_albus
ENSJJAG00000010203	Rnpc3	100	86.240	MGP_CAROLIEiJ_G0025555	Rnpc3	100	85.078	Mus_caroli
ENSJJAG00000010203	Rnpc3	100	86.822	ENSMUSG00000027981	Rnpc3	99	86.853	Mus_musculus
ENSJJAG00000010203	Rnpc3	100	87.016	MGP_PahariEiJ_G0027001	Rnpc3	100	86.240	Mus_pahari
ENSJJAG00000010203	Rnpc3	100	86.240	MGP_SPRETEiJ_G0026505	Rnpc3	100	85.078	Mus_spretus
ENSJJAG00000010203	Rnpc3	100	87.234	ENSMPUG00000007349	RNPC3	99	87.234	Mustela_putorius_furo
ENSJJAG00000010203	Rnpc3	100	84.884	ENSMLUG00000028743	RNPC3	99	83.915	Myotis_lucifugus
ENSJJAG00000010203	Rnpc3	99	88.694	ENSNGAG00000010939	Rnpc3	99	88.694	Nannospalax_galili
ENSJJAG00000010203	Rnpc3	95	52.857	ENSNBRG00000012196	rnpc3	93	52.857	Neolamprologus_brichardi
ENSJJAG00000010203	Rnpc3	100	88.760	ENSNLEG00000012013	RNPC3	99	87.791	Nomascus_leucogenys
ENSJJAG00000010203	Rnpc3	100	83.721	ENSODEG00000007612	RNPC3	95	84.929	Octodon_degus
ENSJJAG00000010203	Rnpc3	95	53.673	ENSONIG00000004770	rnpc3	99	53.673	Oreochromis_niloticus
ENSJJAG00000010203	Rnpc3	90	74.249	ENSOANG00000008220	RNPC3	99	74.678	Ornithorhynchus_anatinus
ENSJJAG00000010203	Rnpc3	100	88.350	ENSOCUG00000004016	RNPC3	99	87.573	Oryctolagus_cuniculus
ENSJJAG00000010203	Rnpc3	96	53.226	ENSORLG00000005694	rnpc3	96	53.455	Oryzias_latipes
ENSJJAG00000010203	Rnpc3	96	54.049	ENSORLG00020005513	rnpc3	96	54.286	Oryzias_latipes_hni
ENSJJAG00000010203	Rnpc3	96	53.239	ENSORLG00015002179	rnpc3	96	53.469	Oryzias_latipes_hsok
ENSJJAG00000010203	Rnpc3	96	53.144	ENSOMEG00000017737	rnpc3	96	54.490	Oryzias_melastigma
ENSJJAG00000010203	Rnpc3	100	88.953	ENSOGAG00000026182	RNPC3	99	88.953	Otolemur_garnettii
ENSJJAG00000010203	Rnpc3	100	89.147	ENSOARG00000018719	RNPC3	99	88.372	Ovis_aries
ENSJJAG00000010203	Rnpc3	100	88.588	ENSPPAG00000037459	RNPC3	99	87.621	Pan_paniscus
ENSJJAG00000010203	Rnpc3	100	73.152	ENSPPAG00000030278	-	95	75.460	Pan_paniscus
ENSJJAG00000010203	Rnpc3	100	87.814	ENSPPRG00000020246	RNPC3	99	87.427	Panthera_pardus
ENSJJAG00000010203	Rnpc3	99	88.166	ENSPTIG00000009887	RNPC3	97	88.595	Panthera_tigris_altaica
ENSJJAG00000010203	Rnpc3	100	88.760	ENSPTRG00000033902	RNPC3	99	87.791	Pan_troglodytes
ENSJJAG00000010203	Rnpc3	100	72.287	ENSPTRG00000044227	-	95	74.127	Pan_troglodytes
ENSJJAG00000010203	Rnpc3	99	88.738	ENSPANG00000012137	RNPC3	99	87.767	Papio_anubis
ENSJJAG00000010203	Rnpc3	98	69.625	ENSPANG00000029957	-	96	65.923	Papio_anubis
ENSJJAG00000010203	Rnpc3	96	52.000	ENSPKIG00000008828	rnpc3	94	50.803	Paramormyrops_kingsleyae
ENSJJAG00000010203	Rnpc3	64	68.976	ENSPSIG00000007396	RNPC3	99	67.470	Pelodiscus_sinensis
ENSJJAG00000010203	Rnpc3	94	50.607	ENSPMGG00000011742	rnpc3	95	51.429	Periophthalmus_magnuspinnatus
ENSJJAG00000010203	Rnpc3	89	87.746	ENSPEMG00000020112	Rnpc3	100	88.496	Peromyscus_maniculatus_bairdii
ENSJJAG00000010203	Rnpc3	74	63.333	ENSPMAG00000003778	rnpc3	96	46.394	Petromyzon_marinus
ENSJJAG00000010203	Rnpc3	100	76.311	ENSPCIG00000004415	-	99	76.311	Phascolarctos_cinereus
ENSJJAG00000010203	Rnpc3	96	52.286	ENSPFOG00000009895	rnpc3	96	52.314	Poecilia_formosa
ENSJJAG00000010203	Rnpc3	96	52.286	ENSPLAG00000012023	rnpc3	96	52.314	Poecilia_latipinna
ENSJJAG00000010203	Rnpc3	96	52.485	ENSPMEG00000003663	rnpc3	96	52.515	Poecilia_mexicana
ENSJJAG00000010203	Rnpc3	96	51.690	ENSPREG00000010206	rnpc3	96	52.113	Poecilia_reticulata
ENSJJAG00000010203	Rnpc3	84	85.484	ENSPPYG00000001102	RNPC3	99	84.332	Pongo_abelii
ENSJJAG00000010203	Rnpc3	95	52.857	ENSPNYG00000020603	rnpc3	96	52.857	Pundamilia_nyererei
ENSJJAG00000010203	Rnpc3	95	55.031	ENSPNAG00000000524	rnpc3	88	54.957	Pygocentrus_nattereri
ENSJJAG00000010203	Rnpc3	100	85.465	ENSRNOG00000017310	Rnpc3	100	84.302	Rattus_norvegicus
ENSJJAG00000010203	Rnpc3	99	83.333	ENSRBIG00000043897	RNPC3	99	82.364	Rhinopithecus_bieti
ENSJJAG00000010203	Rnpc3	99	88.932	ENSRROG00000032334	RNPC3	99	87.961	Rhinopithecus_roxellana
ENSJJAG00000010203	Rnpc3	100	87.573	ENSSBOG00000024473	RNPC3	99	87.184	Saimiri_boliviensis_boliviensis
ENSJJAG00000010203	Rnpc3	100	75.728	ENSSHAG00000011859	RNPC3	99	75.728	Sarcophilus_harrisii
ENSJJAG00000010203	Rnpc3	96	58.350	ENSSFOG00015013055	rnpc3	98	56.238	Scleropages_formosus
ENSJJAG00000010203	Rnpc3	96	51.383	ENSSMAG00000020346	rnpc3	97	50.778	Scophthalmus_maximus
ENSJJAG00000010203	Rnpc3	96	53.937	ENSSDUG00000006600	rnpc3	96	54.491	Seriola_dumerili
ENSJJAG00000010203	Rnpc3	95	54.491	ENSSLDG00000007979	rnpc3	96	54.491	Seriola_lalandi_dorsalis
ENSJJAG00000010203	Rnpc3	97	64.271	ENSSPUG00000003872	-	92	64.706	Sphenodon_punctatus
ENSJJAG00000010203	Rnpc3	96	69.293	ENSSPUG00000008539	-	94	69.636	Sphenodon_punctatus
ENSJJAG00000010203	Rnpc3	96	54.158	ENSSPAG00000005633	rnpc3	96	55.010	Stegastes_partitus
ENSJJAG00000010203	Rnpc3	100	88.178	ENSSSCG00000037254	RNPC3	99	86.047	Sus_scrofa
ENSJJAG00000010203	Rnpc3	88	70.133	ENSTGUG00000004795	-	99	69.248	Taeniopygia_guttata
ENSJJAG00000010203	Rnpc3	96	54.858	ENSTNIG00000018963	rnpc3	97	54.898	Tetraodon_nigroviridis
ENSJJAG00000010203	Rnpc3	99	88.560	ENSUMAG00000007775	RNPC3	97	89.206	Ursus_maritimus
ENSJJAG00000010203	Rnpc3	100	87.234	ENSVVUG00000000331	RNPC3	99	85.687	Vulpes_vulpes
ENSJJAG00000010203	Rnpc3	98	51.267	ENSXETG00000025027	rnpc3	96	51.400	Xenopus_tropicalis
ENSJJAG00000010203	Rnpc3	96	51.190	ENSXCOG00000005013	rnpc3	96	50.484	Xiphophorus_couchianus
ENSJJAG00000010203	Rnpc3	96	52.475	ENSXMAG00000006495	rnpc3	96	52.505	Xiphophorus_maculatus