EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000010268 (Gene tree)
Gene ID: 101606891
Gene Symbol: Ythdc1
Alias: A730098D12Rik
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 19943 bases
Position: chrJH725514.1:3358169-3378111
Accession: 101606891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000005384	YTH	PF04146.15	8.5e-40	1	1
ENSJJAP00000005394	YTH	PF04146.15	9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000011750	-	2789	XM_004665370	ENSJJAP00000005384	693 (aa)	XP_004665427	-
ENSJJAT00000011761	-	2163	-	ENSJJAP00000005394	720 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000010268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000010268	Ythdc1	93	93.304	ENSG00000083896	YTHDC1	100	94.595	Homo_sapiens
ENSJJAG00000010268	Ythdc1	58	59.102	ENSAPOG00000013997	ythdc1	57	62.250	Acanthochromis_polyacanthus
ENSJJAG00000010268	Ythdc1	93	90.370	ENSAMEG00000005688	YTHDC1	91	89.926	Ailuropoda_melanoleuca
ENSJJAG00000010268	Ythdc1	71	57.412	ENSACIG00000019728	ythdc1	62	59.390	Amphilophus_citrinellus
ENSJJAG00000010268	Ythdc1	57	61.928	ENSAOCG00000000239	ythdc1	59	66.746	Amphiprion_ocellaris
ENSJJAG00000010268	Ythdc1	51	64.151	ENSAPEG00000000618	ythdc1	53	68.661	Amphiprion_percula
ENSJJAG00000010268	Ythdc1	92	83.483	ENSAPLG00000009921	YTHDC1	60	94.145	Anas_platyrhynchos
ENSJJAG00000010268	Ythdc1	93	83.358	ENSACAG00000009697	YTHDC1	59	91.803	Anolis_carolinensis
ENSJJAG00000010268	Ythdc1	93	93.462	ENSANAG00000001522	YTHDC1	92	92.719	Aotus_nancymaae
ENSJJAG00000010268	Ythdc1	57	60.482	ENSACLG00000019371	ythdc1	59	65.789	Astatotilapia_calliptera
ENSJJAG00000010268	Ythdc1	92	64.394	ENSAMXG00000006978	ythdc1	58	79.177	Astyanax_mexicanus
ENSJJAG00000010268	Ythdc1	93	90.045	ENSBTAG00000015572	YTHDC1	91	89.599	Bos_taurus
ENSJJAG00000010268	Ythdc1	93	92.125	ENSCJAG00000009934	YTHDC1	91	92.260	Callithrix_jacchus
ENSJJAG00000010268	Ythdc1	93	90.222	ENSCAFG00000002821	YTHDC1	91	89.778	Canis_familiaris
ENSJJAG00000010268	Ythdc1	93	90.222	ENSCAFG00020027112	YTHDC1	91	89.778	Canis_lupus_dingo
ENSJJAG00000010268	Ythdc1	92	85.321	ENSCHIG00000004810	YTHDC1	95	88.825	Capra_hircus
ENSJJAG00000010268	Ythdc1	93	92.262	ENSTSYG00000011668	YTHDC1	91	92.093	Carlito_syrichta
ENSJJAG00000010268	Ythdc1	91	66.510	ENSCAPG00000008722	YTHDC1	90	64.396	Cavia_aperea
ENSJJAG00000010268	Ythdc1	93	84.970	ENSCPOG00000010929	YTHDC1	90	84.341	Cavia_porcellus
ENSJJAG00000010268	Ythdc1	93	92.250	ENSCCAG00000035754	YTHDC1	91	92.081	Cebus_capucinus
ENSJJAG00000010268	Ythdc1	93	93.314	ENSCATG00000036320	YTHDC1	97	93.462	Cercocebus_atys
ENSJJAG00000010268	Ythdc1	92	93.433	ENSCLAG00000005482	YTHDC1	92	91.791	Chinchilla_lanigera
ENSJJAG00000010268	Ythdc1	93	92.125	ENSCSAG00000005252	YTHDC1	91	91.382	Chlorocebus_sabaeus
ENSJJAG00000010268	Ythdc1	93	86.357	ENSCPBG00000021965	YTHDC1	63	94.379	Chrysemys_picta_bellii
ENSJJAG00000010268	Ythdc1	93	93.165	ENSCANG00000004769	YTHDC1	96	93.269	Colobus_angolensis_palliatus
ENSJJAG00000010268	Ythdc1	93	93.006	ENSCGRG00001000816	Ythdc1	92	91.815	Cricetulus_griseus_chok1gshd
ENSJJAG00000010268	Ythdc1	93	91.815	ENSCGRG00000009807	Ythdc1	92	91.473	Cricetulus_griseus_crigri
ENSJJAG00000010268	Ythdc1	57	60.508	ENSCSEG00000020404	ythdc1	59	66.427	Cynoglossus_semilaevis
ENSJJAG00000010268	Ythdc1	57	60.789	ENSCVAG00000022349	ythdc1	59	65.542	Cyprinodon_variegatus
ENSJJAG00000010268	Ythdc1	92	63.650	ENSDARG00000051953	ythdc1	58	78.133	Danio_rerio
ENSJJAG00000010268	Ythdc1	93	90.255	ENSDNOG00000004949	YTHDC1	91	90.255	Dasypus_novemcinctus
ENSJJAG00000010268	Ythdc1	92	92.411	ENSDORG00000013045	Ythdc1	92	92.262	Dipodomys_ordii
ENSJJAG00000010268	Ythdc1	79	100.000	ENSETEG00000001878	YTHDC1	73	100.000	Echinops_telfairi
ENSJJAG00000010268	Ythdc1	93	90.815	ENSEASG00005018383	YTHDC1	92	89.889	Equus_asinus_asinus
ENSJJAG00000010268	Ythdc1	93	90.222	ENSECAG00000018303	YTHDC1	98	89.015	Equus_caballus
ENSJJAG00000010268	Ythdc1	93	89.450	ENSEEUG00000015466	YTHDC1	91	89.004	Erinaceus_europaeus
ENSJJAG00000010268	Ythdc1	92	62.312	ENSELUG00000014029	ythdc1	57	76.410	Esox_lucius
ENSJJAG00000010268	Ythdc1	93	90.504	ENSFCAG00000026791	YTHDC1	91	91.654	Felis_catus
ENSJJAG00000010268	Ythdc1	64	93.415	ENSFALG00000006581	YTHDC1	85	91.885	Ficedula_albicollis
ENSJJAG00000010268	Ythdc1	92	93.002	ENSFDAG00000018560	YTHDC1	92	91.757	Fukomys_damarensis
ENSJJAG00000010268	Ythdc1	65	66.038	ENSFHEG00000001286	ythdc1	60	55.128	Fundulus_heteroclitus
ENSJJAG00000010268	Ythdc1	53	77.340	ENSGMOG00000018815	ythdc1	71	77.340	Gadus_morhua
ENSJJAG00000010268	Ythdc1	92	85.938	ENSGALG00000035906	YTHDC1	55	95.761	Gallus_gallus
ENSJJAG00000010268	Ythdc1	58	62.093	ENSGACG00000015486	ythdc1	57	62.530	Gasterosteus_aculeatus
ENSJJAG00000010268	Ythdc1	92	86.486	ENSGAGG00000007108	YTHDC1	60	95.785	Gopherus_agassizii
ENSJJAG00000010268	Ythdc1	93	93.165	ENSGGOG00000021958	YTHDC1	97	93.256	Gorilla_gorilla
ENSJJAG00000010268	Ythdc1	57	60.482	ENSHBUG00000019288	ythdc1	59	65.789	Haplochromis_burtoni
ENSJJAG00000010268	Ythdc1	93	93.563	ENSHGLG00000006319	-	91	93.114	Heterocephalus_glaber_female
ENSJJAG00000010268	Ythdc1	95	69.839	ENSHGLG00000003239	-	86	69.970	Heterocephalus_glaber_female
ENSJJAG00000010268	Ythdc1	93	92.665	ENSHGLG00100001556	-	92	92.216	Heterocephalus_glaber_male
ENSJJAG00000010268	Ythdc1	95	68.367	ENSHGLG00100008060	-	86	68.460	Heterocephalus_glaber_male
ENSJJAG00000010268	Ythdc1	54	68.421	ENSHCOG00000001520	ythdc1	82	68.421	Hippocampus_comes
ENSJJAG00000010268	Ythdc1	93	66.569	ENSIPUG00000018136	ythdc1	61	81.549	Ictalurus_punctatus
ENSJJAG00000010268	Ythdc1	93	92.125	ENSSTOG00000013652	YTHDC1	91	92.273	Ictidomys_tridecemlineatus
ENSJJAG00000010268	Ythdc1	58	59.641	ENSKMAG00000006483	ythdc1	85	65.000	Kryptolebias_marmoratus
ENSJJAG00000010268	Ythdc1	64	62.791	ENSLBEG00000020831	ythdc1	71	77.143	Labrus_bergylta
ENSJJAG00000010268	Ythdc1	88	72.699	ENSLACG00000004893	YTHDC1	92	72.543	Latimeria_chalumnae
ENSJJAG00000010268	Ythdc1	93	72.429	ENSLOCG00000003045	ythdc1	89	86.321	Lepisosteus_oculatus
ENSJJAG00000010268	Ythdc1	93	92.954	ENSLAFG00000021592	YTHDC1	91	92.654	Loxodonta_africana
ENSJJAG00000010268	Ythdc1	93	93.314	ENSMFAG00000031927	YTHDC1	96	93.269	Macaca_fascicularis
ENSJJAG00000010268	Ythdc1	92	93.304	ENSMMUG00000002265	YTHDC1	95	90.533	Macaca_mulatta
ENSJJAG00000010268	Ythdc1	93	93.165	ENSMNEG00000033751	YTHDC1	96	93.269	Macaca_nemestrina
ENSJJAG00000010268	Ythdc1	93	93.165	ENSMLEG00000042147	YTHDC1	96	93.269	Mandrillus_leucophaeus
ENSJJAG00000010268	Ythdc1	57	61.871	ENSMAMG00000013122	ythdc1	58	66.348	Mastacembelus_armatus
ENSJJAG00000010268	Ythdc1	57	60.482	ENSMZEG00005023173	ythdc1	59	65.789	Maylandia_zebra
ENSJJAG00000010268	Ythdc1	93	83.508	ENSMGAG00000010391	YTHDC1	59	93.911	Meleagris_gallopavo
ENSJJAG00000010268	Ythdc1	93	92.560	ENSMAUG00000001286	Ythdc1	92	91.518	Mesocricetus_auratus
ENSJJAG00000010268	Ythdc1	93	94.179	ENSMICG00000034640	YTHDC1	91	92.090	Microcebus_murinus
ENSJJAG00000010268	Ythdc1	93	93.134	ENSMOCG00000020201	Ythdc1	92	91.791	Microtus_ochrogaster
ENSJJAG00000010268	Ythdc1	87	69.213	ENSMODG00000014337	-	94	69.554	Monodelphis_domestica
ENSJJAG00000010268	Ythdc1	93	87.237	ENSMODG00000020754	-	91	85.886	Monodelphis_domestica
ENSJJAG00000010268	Ythdc1	66	56.485	ENSMODG00000009173	-	88	59.953	Monodelphis_domestica
ENSJJAG00000010268	Ythdc1	96	50.213	ENSMODG00000010076	-	60	59.906	Monodelphis_domestica
ENSJJAG00000010268	Ythdc1	50	68.571	ENSMALG00000013412	ythdc1	56	68.768	Monopterus_albus
ENSJJAG00000010268	Ythdc1	93	93.006	MGP_CAROLIEiJ_G0027347	Ythdc1	93	90.095	Mus_caroli
ENSJJAG00000010268	Ythdc1	93	92.273	ENSMUSG00000035851	Ythdc1	93	89.546	Mus_musculus
ENSJJAG00000010268	Ythdc1	93	92.719	MGP_PahariEiJ_G0017126	Ythdc1	91	91.976	Mus_pahari
ENSJJAG00000010268	Ythdc1	93	92.571	MGP_SPRETEiJ_G0028339	Ythdc1	91	91.828	Mus_spretus
ENSJJAG00000010268	Ythdc1	93	72.083	ENSMPUG00000001743	YTHDC1	53	96.419	Mustela_putorius_furo
ENSJJAG00000010268	Ythdc1	92	91.168	ENSMLUG00000016300	YTHDC1	92	90.719	Myotis_lucifugus
ENSJJAG00000010268	Ythdc1	60	89.524	ENSNGAG00000024000	Ythdc1	93	87.173	Nannospalax_galili
ENSJJAG00000010268	Ythdc1	62	62.349	ENSNBRG00000007663	ythdc1	70	65.534	Neolamprologus_brichardi
ENSJJAG00000010268	Ythdc1	93	91.964	ENSNLEG00000009202	YTHDC1	96	91.522	Nomascus_leucogenys
ENSJJAG00000010268	Ythdc1	83	81.271	ENSMEUG00000007128	YTHDC1	81	81.271	Notamacropus_eugenii
ENSJJAG00000010268	Ythdc1	77	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSJJAG00000010268	Ythdc1	93	92.216	ENSODEG00000001715	YTHDC1	91	92.365	Octodon_degus
ENSJJAG00000010268	Ythdc1	58	63.048	ENSONIG00000012651	ythdc1	59	66.268	Oreochromis_niloticus
ENSJJAG00000010268	Ythdc1	88	76.471	ENSOANG00000014398	YTHDC1	55	96.962	Ornithorhynchus_anatinus
ENSJJAG00000010268	Ythdc1	93	79.586	ENSOCUG00000015886	YTHDC1	56	93.564	Oryctolagus_cuniculus
ENSJJAG00000010268	Ythdc1	57	61.650	ENSORLG00000030544	ythdc1	60	66.024	Oryzias_latipes
ENSJJAG00000010268	Ythdc1	57	60.628	ENSORLG00020019316	ythdc1	60	66.024	Oryzias_latipes_hni
ENSJJAG00000010268	Ythdc1	57	61.765	ENSOMEG00000000551	ythdc1	60	65.526	Oryzias_melastigma
ENSJJAG00000010268	Ythdc1	93	91.369	ENSOGAG00000003362	YTHDC1	91	90.327	Otolemur_garnettii
ENSJJAG00000010268	Ythdc1	93	90.045	ENSOARG00000008633	YTHDC1	91	89.599	Ovis_aries
ENSJJAG00000010268	Ythdc1	93	93.304	ENSPPAG00000041315	YTHDC1	97	91.313	Pan_paniscus
ENSJJAG00000010268	Ythdc1	93	91.543	ENSPPRG00000011979	YTHDC1	91	91.098	Panthera_pardus
ENSJJAG00000010268	Ythdc1	92	91.233	ENSPTIG00000015527	YTHDC1	93	90.788	Panthera_tigris_altaica
ENSJJAG00000010268	Ythdc1	93	93.304	ENSPTRG00000016105	YTHDC1	97	91.313	Pan_troglodytes
ENSJJAG00000010268	Ythdc1	93	93.314	ENSPANG00000021590	YTHDC1	96	93.462	Papio_anubis
ENSJJAG00000010268	Ythdc1	93	67.651	ENSPKIG00000018497	ythdc1	91	64.897	Paramormyrops_kingsleyae
ENSJJAG00000010268	Ythdc1	93	85.157	ENSPSIG00000002782	YTHDC1	60	94.145	Pelodiscus_sinensis
ENSJJAG00000010268	Ythdc1	93	93.006	ENSPEMG00000013850	Ythdc1	92	91.667	Peromyscus_maniculatus_bairdii
ENSJJAG00000010268	Ythdc1	93	87.087	ENSPCIG00000006870	YTHDC1	91	86.385	Phascolarctos_cinereus
ENSJJAG00000010268	Ythdc1	57	59.397	ENSPFOG00000013404	ythdc1	60	64.663	Poecilia_formosa
ENSJJAG00000010268	Ythdc1	57	59.397	ENSPLAG00000011079	ythdc1	85	64.663	Poecilia_latipinna
ENSJJAG00000010268	Ythdc1	57	59.397	ENSPMEG00000009238	ythdc1	60	64.663	Poecilia_mexicana
ENSJJAG00000010268	Ythdc1	71	58.019	ENSPREG00000016973	ythdc1	59	60.050	Poecilia_reticulata
ENSJJAG00000010268	Ythdc1	80	91.297	ENSPPYG00000014726	YTHDC1	91	90.444	Pongo_abelii
ENSJJAG00000010268	Ythdc1	76	89.091	ENSPCAG00000009607	YTHDC1	73	88.636	Procavia_capensis
ENSJJAG00000010268	Ythdc1	93	89.552	ENSPCOG00000019105	YTHDC1	91	87.463	Propithecus_coquereli
ENSJJAG00000010268	Ythdc1	93	87.870	ENSPVAG00000015551	YTHDC1	91	88.609	Pteropus_vampyrus
ENSJJAG00000010268	Ythdc1	57	60.482	ENSPNYG00000011687	ythdc1	59	65.789	Pundamilia_nyererei
ENSJJAG00000010268	Ythdc1	93	67.742	ENSPNAG00000028365	ythdc1	60	82.916	Pygocentrus_nattereri
ENSJJAG00000010268	Ythdc1	93	91.852	ENSRNOG00000001996	Ythdc1	91	92.444	Rattus_norvegicus
ENSJJAG00000010268	Ythdc1	93	92.125	ENSRBIG00000028279	YTHDC1	96	91.923	Rhinopithecus_bieti
ENSJJAG00000010268	Ythdc1	93	93.165	ENSRROG00000035028	YTHDC1	96	93.269	Rhinopithecus_roxellana
ENSJJAG00000010268	Ythdc1	93	93.314	ENSSBOG00000022353	YTHDC1	96	93.269	Saimiri_boliviensis_boliviensis
ENSJJAG00000010268	Ythdc1	93	86.937	ENSSHAG00000002538	YTHDC1	91	85.736	Sarcophilus_harrisii
ENSJJAG00000010268	Ythdc1	93	67.941	ENSSFOG00015003298	ythdc1	60	83.721	Scleropages_formosus
ENSJJAG00000010268	Ythdc1	57	59.397	ENSSMAG00000009086	ythdc1	60	65.468	Scophthalmus_maximus
ENSJJAG00000010268	Ythdc1	57	61.017	ENSSDUG00000022008	ythdc1	59	66.268	Seriola_dumerili
ENSJJAG00000010268	Ythdc1	57	61.017	ENSSLDG00000007926	ythdc1	59	66.268	Seriola_lalandi_dorsalis
ENSJJAG00000010268	Ythdc1	73	91.149	ENSSARG00000010960	YTHDC1	91	91.337	Sorex_araneus
ENSJJAG00000010268	Ythdc1	93	81.642	ENSSPUG00000009357	YTHDC1	62	93.473	Sphenodon_punctatus
ENSJJAG00000010268	Ythdc1	58	61.261	ENSSPAG00000011449	ythdc1	59	66.746	Stegastes_partitus
ENSJJAG00000010268	Ythdc1	93	90.694	ENSSSCG00000035505	YTHDC1	92	90.079	Sus_scrofa
ENSJJAG00000010268	Ythdc1	93	85.757	ENSTGUG00000004452	-	59	94.379	Taeniopygia_guttata
ENSJJAG00000010268	Ythdc1	64	72.500	ENSTRUG00000010142	ythdc1	69	72.500	Takifugu_rubripes
ENSJJAG00000010268	Ythdc1	92	50.663	ENSTNIG00000013243	ythdc1	79	64.155	Tetraodon_nigroviridis
ENSJJAG00000010268	Ythdc1	92	83.988	ENSTBEG00000011546	YTHDC1	91	84.290	Tupaia_belangeri
ENSJJAG00000010268	Ythdc1	93	89.630	ENSTTRG00000005083	YTHDC1	91	89.926	Tursiops_truncatus
ENSJJAG00000010268	Ythdc1	87	90.032	ENSUAMG00000010388	YTHDC1	92	90.429	Ursus_americanus
ENSJJAG00000010268	Ythdc1	100	82.108	ENSUMAG00000013668	YTHDC1	98	82.108	Ursus_maritimus
ENSJJAG00000010268	Ythdc1	92	92.379	ENSVPAG00000009040	YTHDC1	91	91.446	Vicugna_pacos
ENSJJAG00000010268	Ythdc1	93	91.556	ENSVVUG00000005387	YTHDC1	91	91.111	Vulpes_vulpes
ENSJJAG00000010268	Ythdc1	93	74.107	ENSXETG00000017960	ythdc1	91	71.651	Xenopus_tropicalis
ENSJJAG00000010268	Ythdc1	50	52.574	ENSXCOG00000000530	ythdc1	78	56.198	Xiphophorus_couchianus
ENSJJAG00000010268	Ythdc1	57	58.933	ENSXMAG00000005196	ythdc1	61	64.423	Xiphophorus_maculatus