EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000010314 (Gene tree)
Gene ID: -
Gene Symbol: Rad54b
Alias: E130016E03Rik
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 143807 bases
Position: chrJH725457.1:15197923-15341729
Accession: 101598176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000005398	ResIII	PF04851.15	4.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000011766	-	2730	XM_004656937	ENSJJAP00000005398	909 (aa)	XP_004656994	-

Gene Model

Click here to download ENSJJAG00000010314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000010314	Rad54b	69	36.892	ENSJJAG00000000235	-	80	37.049
ENSJJAG00000010314	Rad54b	59	31.115	ENSJJAG00000018150	Ercc6l2	83	31.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000010314	Rad54b	80	86.464	ENSG00000265817	FSBP	99	86.464	Homo_sapiens
ENSJJAG00000010314	Rad54b	99	82.508	ENSG00000197275	RAD54B	99	82.508	Homo_sapiens
ENSJJAG00000010314	Rad54b	100	81.689	ENSAMEG00000005834	-	100	81.689	Ailuropoda_melanoleuca
ENSJJAG00000010314	Rad54b	99	53.913	ENSACIG00000013005	rad54b	99	53.913	Amphilophus_citrinellus
ENSJJAG00000010314	Rad54b	99	53.805	ENSAOCG00000008523	rad54b	99	53.904	Amphiprion_ocellaris
ENSJJAG00000010314	Rad54b	99	53.166	ENSAPEG00000001673	rad54b	99	53.166	Amphiprion_percula
ENSJJAG00000010314	Rad54b	99	53.261	ENSATEG00000001527	rad54b	99	53.370	Anabas_testudineus
ENSJJAG00000010314	Rad54b	99	68.438	ENSAPLG00000014366	-	99	68.438	Anas_platyrhynchos
ENSJJAG00000010314	Rad54b	88	69.925	ENSACAG00000003671	-	99	69.925	Anolis_carolinensis
ENSJJAG00000010314	Rad54b	71	84.568	ENSANAG00000019528	-	99	84.568	Aotus_nancymaae
ENSJJAG00000010314	Rad54b	99	53.980	ENSACLG00000007826	rad54b	99	53.980	Astatotilapia_calliptera
ENSJJAG00000010314	Rad54b	85	58.323	ENSAMXG00000039985	rad54b	95	58.040	Astyanax_mexicanus
ENSJJAG00000010314	Rad54b	100	79.473	ENSBTAG00000000632	RAD54B	100	79.473	Bos_taurus
ENSJJAG00000010314	Rad54b	79	36.546	WBGene00013792	Y116A8C.13	98	33.679	Caenorhabditis_elegans
ENSJJAG00000010314	Rad54b	99	81.209	ENSCJAG00000000080	-	99	84.966	Callithrix_jacchus
ENSJJAG00000010314	Rad54b	100	78.947	ENSCAFG00000009179	RAD54B	99	78.947	Canis_familiaris
ENSJJAG00000010314	Rad54b	100	78.947	ENSCAFG00020012084	-	99	78.947	Canis_lupus_dingo
ENSJJAG00000010314	Rad54b	100	79.473	ENSCHIG00000008230	-	100	79.473	Capra_hircus
ENSJJAG00000010314	Rad54b	100	81.998	ENSTSYG00000013234	-	100	81.998	Carlito_syrichta
ENSJJAG00000010314	Rad54b	100	80.330	ENSCPOG00000011643	-	99	80.330	Cavia_porcellus
ENSJJAG00000010314	Rad54b	99	81.538	ENSCCAG00000011754	-	99	84.966	Cebus_capucinus
ENSJJAG00000010314	Rad54b	99	81.938	ENSCATG00000030661	-	99	86.030	Cercocebus_atys
ENSJJAG00000010314	Rad54b	99	80.947	ENSCLAG00000010476	-	99	80.947	Chinchilla_lanigera
ENSJJAG00000010314	Rad54b	99	81.938	ENSCSAG00000012712	-	99	81.938	Chlorocebus_sabaeus
ENSJJAG00000010314	Rad54b	99	68.547	ENSCPBG00000003204	-	99	68.845	Chrysemys_picta_bellii
ENSJJAG00000010314	Rad54b	99	82.048	ENSCANG00000017939	-	99	86.030	Colobus_angolensis_palliatus
ENSJJAG00000010314	Rad54b	100	80.220	ENSCGRG00001020184	Rad54b	100	80.220	Cricetulus_griseus_chok1gshd
ENSJJAG00000010314	Rad54b	100	79.121	ENSCGRG00000016752	Rad54b	100	79.121	Cricetulus_griseus_crigri
ENSJJAG00000010314	Rad54b	99	53.135	ENSCSEG00000001601	rad54b	99	53.135	Cynoglossus_semilaevis
ENSJJAG00000010314	Rad54b	99	54.957	ENSCVAG00000009200	rad54b	99	54.957	Cyprinodon_variegatus
ENSJJAG00000010314	Rad54b	86	58.020	ENSDARG00000092134	rad54b	100	59.969	Danio_rerio
ENSJJAG00000010314	Rad54b	99	78.791	ENSDNOG00000015535	-	99	78.791	Dasypus_novemcinctus
ENSJJAG00000010314	Rad54b	100	81.319	ENSDORG00000002492	Rad54b	100	81.319	Dipodomys_ordii
ENSJJAG00000010314	Rad54b	87	78.173	ENSETEG00000010605	-	100	78.173	Echinops_telfairi
ENSJJAG00000010314	Rad54b	99	46.976	ENSEBUG00000009104	rad54b	99	46.882	Eptatretus_burgeri
ENSJJAG00000010314	Rad54b	97	81.200	ENSEASG00005004021	-	100	81.200	Equus_asinus_asinus
ENSJJAG00000010314	Rad54b	100	81.319	ENSECAG00000021949	-	99	81.319	Equus_caballus
ENSJJAG00000010314	Rad54b	80	82.609	ENSEEUG00000008056	-	80	82.609	Erinaceus_europaeus
ENSJJAG00000010314	Rad54b	99	53.483	ENSELUG00000009287	rad54b	99	53.518	Esox_lucius
ENSJJAG00000010314	Rad54b	100	81.140	ENSFCAG00000015513	-	100	85.537	Felis_catus
ENSJJAG00000010314	Rad54b	99	66.812	ENSFALG00000005467	-	99	66.812	Ficedula_albicollis
ENSJJAG00000010314	Rad54b	99	80.727	ENSFDAG00000020541	-	100	80.727	Fukomys_damarensis
ENSJJAG00000010314	Rad54b	86	57.980	ENSFHEG00000014382	rad54b	87	57.980	Fundulus_heteroclitus
ENSJJAG00000010314	Rad54b	86	57.054	ENSGMOG00000014774	rad54b	98	57.054	Gadus_morhua
ENSJJAG00000010314	Rad54b	99	67.171	ENSGALG00000043597	RAD54B	99	67.171	Gallus_gallus
ENSJJAG00000010314	Rad54b	99	54.705	ENSGAFG00000007901	rad54b	99	54.705	Gambusia_affinis
ENSJJAG00000010314	Rad54b	99	54.028	ENSGACG00000009128	rad54b	99	54.028	Gasterosteus_aculeatus
ENSJJAG00000010314	Rad54b	99	68.777	ENSGAGG00000018747	-	99	68.777	Gopherus_agassizii
ENSJJAG00000010314	Rad54b	100	81.778	ENSGGOG00000023516	-	100	81.778	Gorilla_gorilla
ENSJJAG00000010314	Rad54b	99	53.814	ENSHBUG00000016017	rad54b	99	53.814	Haplochromis_burtoni
ENSJJAG00000010314	Rad54b	100	79.585	ENSHGLG00000008263	RAD54B	99	79.585	Heterocephalus_glaber_female
ENSJJAG00000010314	Rad54b	100	78.742	ENSHGLG00100008108	-	99	78.742	Heterocephalus_glaber_male
ENSJJAG00000010314	Rad54b	99	53.005	ENSHCOG00000004764	rad54b	98	55.583	Hippocampus_comes
ENSJJAG00000010314	Rad54b	99	52.947	ENSIPUG00000018531	rad54b	99	52.947	Ictalurus_punctatus
ENSJJAG00000010314	Rad54b	99	81.567	ENSSTOG00000010791	-	99	81.567	Ictidomys_tridecemlineatus
ENSJJAG00000010314	Rad54b	87	56.143	ENSKMAG00000004744	rad54b	93	56.143	Kryptolebias_marmoratus
ENSJJAG00000010314	Rad54b	82	69.396	ENSLACG00000000859	-	100	69.396	Latimeria_chalumnae
ENSJJAG00000010314	Rad54b	99	56.624	ENSLOCG00000010100	rad54b	93	63.396	Lepisosteus_oculatus
ENSJJAG00000010314	Rad54b	89	82.178	ENSLAFG00000015315	-	100	82.178	Loxodonta_africana
ENSJJAG00000010314	Rad54b	99	81.938	ENSMFAG00000031629	-	99	86.030	Macaca_fascicularis
ENSJJAG00000010314	Rad54b	99	81.938	ENSMMUG00000005659	-	99	81.938	Macaca_mulatta
ENSJJAG00000010314	Rad54b	99	81.918	ENSMNEG00000016408	-	99	81.918	Macaca_nemestrina
ENSJJAG00000010314	Rad54b	99	81.938	ENSMLEG00000006946	-	99	81.938	Mandrillus_leucophaeus
ENSJJAG00000010314	Rad54b	99	54.447	ENSMAMG00000012269	rad54b	99	54.447	Mastacembelus_armatus
ENSJJAG00000010314	Rad54b	99	53.814	ENSMZEG00005005281	rad54b	95	59.596	Maylandia_zebra
ENSJJAG00000010314	Rad54b	99	66.991	ENSMGAG00000012024	-	99	66.991	Meleagris_gallopavo
ENSJJAG00000010314	Rad54b	100	79.231	ENSMAUG00000013586	Rad54b	100	79.231	Mesocricetus_auratus
ENSJJAG00000010314	Rad54b	99	78.988	ENSMICG00000000754	-	99	78.988	Microcebus_murinus
ENSJJAG00000010314	Rad54b	100	78.266	ENSMOCG00000020035	Rad54b	99	78.485	Microtus_ochrogaster
ENSJJAG00000010314	Rad54b	99	52.814	ENSMMOG00000003394	rad54b	99	52.814	Mola_mola
ENSJJAG00000010314	Rad54b	88	77.210	ENSMODG00000007343	-	99	77.210	Monodelphis_domestica
ENSJJAG00000010314	Rad54b	71	58.669	ENSMALG00000001520	rad54b	99	58.669	Monopterus_albus
ENSJJAG00000010314	Rad54b	100	79.254	MGP_CAROLIEiJ_G0025810	Rad54b	100	79.254	Mus_caroli
ENSJJAG00000010314	Rad54b	100	79.693	ENSMUSG00000078773	Rad54b	100	79.693	Mus_musculus
ENSJJAG00000010314	Rad54b	100	79.473	MGP_PahariEiJ_G0023933	Rad54b	100	79.473	Mus_pahari
ENSJJAG00000010314	Rad54b	100	80.241	MGP_SPRETEiJ_G0026758	Rad54b	100	80.241	Mus_spretus
ENSJJAG00000010314	Rad54b	89	84.198	ENSMPUG00000008878	-	100	84.198	Mustela_putorius_furo
ENSJJAG00000010314	Rad54b	99	79.144	ENSMLUG00000008953	-	99	79.144	Myotis_lucifugus
ENSJJAG00000010314	Rad54b	100	82.533	ENSNGAG00000017537	Rad54b	100	82.533	Nannospalax_galili
ENSJJAG00000010314	Rad54b	99	54.089	ENSNBRG00000013394	rad54b	99	54.089	Neolamprologus_brichardi
ENSJJAG00000010314	Rad54b	99	82.398	ENSNLEG00000003062	-	99	86.050	Nomascus_leucogenys
ENSJJAG00000010314	Rad54b	83	71.311	ENSMEUG00000012426	-	82	71.311	Notamacropus_eugenii
ENSJJAG00000010314	Rad54b	89	75.248	ENSODEG00000002650	-	96	81.692	Octodon_degus
ENSJJAG00000010314	Rad54b	100	78.132	ENSODEG00000019564	-	100	78.132	Octodon_degus
ENSJJAG00000010314	Rad54b	99	54.162	ENSONIG00000006067	rad54b	99	54.162	Oreochromis_niloticus
ENSJJAG00000010314	Rad54b	83	74.768	ENSOANG00000011348	-	100	74.768	Ornithorhynchus_anatinus
ENSJJAG00000010314	Rad54b	100	80.220	ENSOCUG00000016478	-	99	80.220	Oryctolagus_cuniculus
ENSJJAG00000010314	Rad54b	99	54.420	ENSORLG00000008918	rad54b	99	62.191	Oryzias_latipes
ENSJJAG00000010314	Rad54b	71	62.191	ENSORLG00020012171	rad54b	99	62.191	Oryzias_latipes_hni
ENSJJAG00000010314	Rad54b	99	54.565	ENSORLG00015018536	rad54b	99	54.565	Oryzias_latipes_hsok
ENSJJAG00000010314	Rad54b	84	59.050	ENSOMEG00000004345	rad54b	99	59.050	Oryzias_melastigma
ENSJJAG00000010314	Rad54b	99	80.659	ENSOGAG00000007854	-	99	80.659	Otolemur_garnettii
ENSJJAG00000010314	Rad54b	89	82.635	ENSOARG00000007691	-	100	82.635	Ovis_aries
ENSJJAG00000010314	Rad54b	99	80.858	ENSPPAG00000029572	-	99	80.858	Pan_paniscus
ENSJJAG00000010314	Rad54b	100	81.031	ENSPPRG00000007571	-	100	85.537	Panthera_pardus
ENSJJAG00000010314	Rad54b	80	85.537	ENSPTIG00000012670	-	100	85.537	Panthera_tigris_altaica
ENSJJAG00000010314	Rad54b	99	82.288	ENSPTRG00000020427	-	99	86.326	Pan_troglodytes
ENSJJAG00000010314	Rad54b	99	82.048	ENSPANG00000019566	-	99	82.048	Papio_anubis
ENSJJAG00000010314	Rad54b	99	58.425	ENSPKIG00000014974	rad54b	99	58.425	Paramormyrops_kingsleyae
ENSJJAG00000010314	Rad54b	99	66.558	ENSPSIG00000002383	-	98	72.050	Pelodiscus_sinensis
ENSJJAG00000010314	Rad54b	100	80.900	ENSPEMG00000012133	Rad54b	100	80.900	Peromyscus_maniculatus_bairdii
ENSJJAG00000010314	Rad54b	87	57.644	ENSPMAG00000002916	rad54b	99	57.644	Petromyzon_marinus
ENSJJAG00000010314	Rad54b	89	77.009	ENSPCIG00000020151	-	94	76.866	Phascolarctos_cinereus
ENSJJAG00000010314	Rad54b	99	54.429	ENSPFOG00000023411	rad54b	99	54.429	Poecilia_formosa
ENSJJAG00000010314	Rad54b	99	54.749	ENSPLAG00000010430	rad54b	99	54.749	Poecilia_latipinna
ENSJJAG00000010314	Rad54b	99	54.459	ENSPMEG00000016873	rad54b	99	54.478	Poecilia_mexicana
ENSJJAG00000010314	Rad54b	99	54.017	ENSPREG00000018443	rad54b	99	54.017	Poecilia_reticulata
ENSJJAG00000010314	Rad54b	99	82.288	ENSPPYG00000018750	-	99	82.288	Pongo_abelii
ENSJJAG00000010314	Rad54b	99	82.527	ENSPCOG00000026845	-	99	85.931	Propithecus_coquereli
ENSJJAG00000010314	Rad54b	81	83.671	ENSPVAG00000000261	-	86	83.671	Pteropus_vampyrus
ENSJJAG00000010314	Rad54b	86	59.068	ENSPNYG00000018303	rad54b	96	59.068	Pundamilia_nyererei
ENSJJAG00000010314	Rad54b	99	54.144	ENSPNAG00000000295	rad54b	99	54.144	Pygocentrus_nattereri
ENSJJAG00000010314	Rad54b	100	76.839	ENSRNOG00000039949	Rad54b	100	76.839	Rattus_norvegicus
ENSJJAG00000010314	Rad54b	99	81.498	ENSRBIG00000020419	-	99	81.498	Rhinopithecus_bieti
ENSJJAG00000010314	Rad54b	99	81.498	ENSRROG00000039897	-	99	81.498	Rhinopithecus_roxellana
ENSJJAG00000010314	Rad54b	78	37.066	YBR073W	RDH54	78	37.323	Saccharomyces_cerevisiae
ENSJJAG00000010314	Rad54b	99	80.989	ENSSBOG00000028501	-	99	80.989	Saimiri_boliviensis_boliviensis
ENSJJAG00000010314	Rad54b	99	72.448	ENSSHAG00000017038	-	99	72.448	Sarcophilus_harrisii
ENSJJAG00000010314	Rad54b	62	66.667	ENSSFOG00015008483	rad54b	88	66.667	Scleropages_formosus
ENSJJAG00000010314	Rad54b	99	53.795	ENSSMAG00000018659	rad54b	99	53.787	Scophthalmus_maximus
ENSJJAG00000010314	Rad54b	85	58.935	ENSSDUG00000001122	rad54b	98	53.022	Seriola_dumerili
ENSJJAG00000010314	Rad54b	99	51.209	ENSSLDG00000013787	rad54b	99	53.165	Seriola_lalandi_dorsalis
ENSJJAG00000010314	Rad54b	99	66.703	ENSSPUG00000016497	-	99	66.703	Sphenodon_punctatus
ENSJJAG00000010314	Rad54b	99	54.162	ENSSPAG00000012800	rad54b	99	54.162	Stegastes_partitus
ENSJJAG00000010314	Rad54b	99	79.758	ENSSSCG00000006101	-	99	84.336	Sus_scrofa
ENSJJAG00000010314	Rad54b	99	67.029	ENSTGUG00000011880	-	99	67.029	Taeniopygia_guttata
ENSJJAG00000010314	Rad54b	86	59.343	ENSTRUG00000010015	rad54b	99	53.383	Takifugu_rubripes
ENSJJAG00000010314	Rad54b	100	76.839	ENSTTRG00000006312	-	100	76.839	Tursiops_truncatus
ENSJJAG00000010314	Rad54b	100	81.360	ENSUMAG00000016401	-	100	81.360	Ursus_maritimus
ENSJJAG00000010314	Rad54b	100	80.022	ENSVPAG00000003157	-	100	80.022	Vicugna_pacos
ENSJJAG00000010314	Rad54b	99	54.526	ENSXETG00000025924	rad54b	99	58.971	Xenopus_tropicalis
ENSJJAG00000010314	Rad54b	99	54.536	ENSXMAG00000013141	rad54b	99	54.121	Xiphophorus_maculatus