EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000010421 (Gene tree)
Gene ID: 101611877
Gene Symbol: Rbm42
Alias: 1700003D06Rik|3100004P22Rik
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 10002 bases
Position: chrJH725469.1:1745636-1755637
Accession: 101611877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000005495	RRM_1	PF00076.22	5.3e-18	1	1
ENSJJAP00000005490	RRM_1	PF00076.22	5.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000011873	-	1341	-	ENSJJAP00000005495	446 (aa)	-	-
ENSJJAT00000011868	-	1631	XM_004659926	ENSJJAP00000005490	474 (aa)	XP_004659983	-

Gene Model

Click here to download ENSJJAG00000010421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000010421	Rbm42	99	96.452	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSJJAG00000010421	Rbm42	99	96.033	ENSAMEG00000000524	RBM42	100	96.033	Ailuropoda_melanoleuca
ENSJJAG00000010421	Rbm42	99	96.436	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSJJAG00000010421	Rbm42	99	96.017	ENSBTAG00000013440	RBM42	100	96.017	Bos_taurus
ENSJJAG00000010421	Rbm42	99	97.098	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSJJAG00000010421	Rbm42	99	89.518	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSJJAG00000010421	Rbm42	99	96.429	ENSCHIG00000009518	RBM42	100	96.429	Capra_hircus
ENSJJAG00000010421	Rbm42	99	95.816	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSJJAG00000010421	Rbm42	81	97.150	ENSCAPG00000009566	RBM42	99	97.150	Cavia_aperea
ENSJJAG00000010421	Rbm42	100	96.239	ENSCPOG00000012365	RBM42	100	96.239	Cavia_porcellus
ENSJJAG00000010421	Rbm42	99	96.646	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSJJAG00000010421	Rbm42	99	96.406	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSJJAG00000010421	Rbm42	100	95.796	ENSCLAG00000012865	RBM42	100	95.796	Chinchilla_lanigera
ENSJJAG00000010421	Rbm42	99	96.231	ENSCSAG00000004422	RBM42	100	96.231	Chlorocebus_sabaeus
ENSJJAG00000010421	Rbm42	99	88.323	ENSCANG00000030272	RBM42	100	88.323	Colobus_angolensis_palliatus
ENSJJAG00000010421	Rbm42	99	97.085	ENSCGRG00001018540	Rbm42	99	97.085	Cricetulus_griseus_chok1gshd
ENSJJAG00000010421	Rbm42	99	95.565	ENSDNOG00000037397	RBM42	100	95.565	Dasypus_novemcinctus
ENSJJAG00000010421	Rbm42	100	96.882	ENSDORG00000013001	Rbm42	100	96.882	Dipodomys_ordii
ENSJJAG00000010421	Rbm42	75	90.476	ENSETEG00000007878	RBM42	72	90.476	Echinops_telfairi
ENSJJAG00000010421	Rbm42	99	97.978	ENSEASG00005001074	RBM42	100	97.978	Equus_asinus_asinus
ENSJJAG00000010421	Rbm42	99	97.978	ENSECAG00000018215	RBM42	100	97.978	Equus_caballus
ENSJJAG00000010421	Rbm42	99	96.646	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSJJAG00000010421	Rbm42	100	96.231	ENSFDAG00000007440	RBM42	100	96.231	Fukomys_damarensis
ENSJJAG00000010421	Rbm42	99	96.617	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSJJAG00000010421	Rbm42	97	95.413	ENSHGLG00000008418	RBM42	100	94.878	Heterocephalus_glaber_female
ENSJJAG00000010421	Rbm42	97	95.413	ENSHGLG00100018667	RBM42	100	94.878	Heterocephalus_glaber_male
ENSJJAG00000010421	Rbm42	100	96.239	ENSSTOG00000013050	RBM42	100	96.239	Ictidomys_tridecemlineatus
ENSJJAG00000010421	Rbm42	97	92.077	ENSLAFG00000014993	RBM42	99	90.566	Loxodonta_africana
ENSJJAG00000010421	Rbm42	99	96.406	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSJJAG00000010421	Rbm42	99	96.847	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSJJAG00000010421	Rbm42	100	95.588	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSJJAG00000010421	Rbm42	99	96.406	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSJJAG00000010421	Rbm42	99	96.855	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSJJAG00000010421	Rbm42	100	96.659	ENSMOCG00000000405	Rbm42	100	96.659	Microtus_ochrogaster
ENSJJAG00000010421	Rbm42	99	97.982	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.982	Mus_caroli
ENSJJAG00000010421	Rbm42	99	97.982	ENSMUSG00000036733	Rbm42	99	97.982	Mus_musculus
ENSJJAG00000010421	Rbm42	99	98.430	MGP_PahariEiJ_G0012770	Rbm42	99	98.430	Mus_pahari
ENSJJAG00000010421	Rbm42	99	97.982	MGP_SPRETEiJ_G0030632	Rbm42	99	97.982	Mus_spretus
ENSJJAG00000010421	Rbm42	99	96.875	ENSMPUG00000006288	RBM42	100	96.875	Mustela_putorius_furo
ENSJJAG00000010421	Rbm42	99	94.969	ENSMLUG00000011334	RBM42	100	94.969	Myotis_lucifugus
ENSJJAG00000010421	Rbm42	100	95.991	ENSNGAG00000019698	Rbm42	100	95.991	Nannospalax_galili
ENSJJAG00000010421	Rbm42	70	97.605	ENSNLEG00000011272	-	94	90.782	Nomascus_leucogenys
ENSJJAG00000010421	Rbm42	95	83.589	ENSMEUG00000016300	RBM42	100	84.874	Notamacropus_eugenii
ENSJJAG00000010421	Rbm42	99	92.647	ENSOPRG00000001229	RBM42	100	87.605	Ochotona_princeps
ENSJJAG00000010421	Rbm42	99	96.205	ENSODEG00000013705	RBM42	99	96.205	Octodon_degus
ENSJJAG00000010421	Rbm42	99	95.787	ENSOCUG00000003337	RBM42	100	95.787	Oryctolagus_cuniculus
ENSJJAG00000010421	Rbm42	99	95.807	ENSOGAG00000004144	RBM42	100	95.807	Otolemur_garnettii
ENSJJAG00000010421	Rbm42	99	96.875	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSJJAG00000010421	Rbm42	99	96.646	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSJJAG00000010421	Rbm42	99	96.226	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSJJAG00000010421	Rbm42	99	96.617	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSJJAG00000010421	Rbm42	99	96.398	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSJJAG00000010421	Rbm42	100	97.327	ENSPEMG00000012065	Rbm42	100	97.327	Peromyscus_maniculatus_bairdii
ENSJJAG00000010421	Rbm42	99	95.052	ENSPPYG00000009871	RBM42	100	95.052	Pongo_abelii
ENSJJAG00000010421	Rbm42	87	95.738	ENSPCAG00000013053	RBM42	100	81.342	Procavia_capensis
ENSJJAG00000010421	Rbm42	99	96.855	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSJJAG00000010421	Rbm42	70	97.898	ENSPCOG00000020672	RBM42	81	97.898	Propithecus_coquereli
ENSJJAG00000010421	Rbm42	99	95.807	ENSPVAG00000012815	RBM42	100	95.807	Pteropus_vampyrus
ENSJJAG00000010421	Rbm42	99	97.758	ENSRNOG00000024278	Rbm42	99	97.758	Rattus_norvegicus
ENSJJAG00000010421	Rbm42	99	96.406	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSJJAG00000010421	Rbm42	99	96.875	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSJJAG00000010421	Rbm42	85	98.030	ENSSBOG00000030666	RBM42	100	98.030	Saimiri_boliviensis_boliviensis
ENSJJAG00000010421	Rbm42	99	86.250	ENSSARG00000010724	RBM42	100	86.250	Sorex_araneus
ENSJJAG00000010421	Rbm42	99	95.982	ENSSSCG00000002905	RBM42	100	95.982	Sus_scrofa
ENSJJAG00000010421	Rbm42	99	96.652	ENSUAMG00000020711	RBM42	100	96.652	Ursus_americanus
ENSJJAG00000010421	Rbm42	99	96.226	ENSUMAG00000020223	RBM42	100	96.226	Ursus_maritimus
ENSJJAG00000010421	Rbm42	99	96.652	ENSVVUG00000015117	RBM42	100	96.652	Vulpes_vulpes