EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSJJAG00000010463 (Gene tree)
Gene ID
101613369
Gene Symbol
Msi1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Jaculus_jaculus
Status
putative
Strand
Plus strand
Length
25074 bases
Position
chrJH725505.1:6746754-6771827
Accession
101613369
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSJJAP00000005582RRM_1PF00076.224.6e-3412
ENSJJAP00000005582RRM_1PF00076.224.6e-3422
ENSJJAP00000005576RRM_1PF00076.224.8e-3412
ENSJJAP00000005576RRM_1PF00076.224.8e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSJJAT00000011961-1074-ENSJJAP00000005582357 (aa)--
ENSJJAT00000011955-1134XM_004664137ENSJJAP00000005576362 (aa)XP_004664194UPI0000073DD8
Gene Model
Click here to download ENSJJAG00000010463's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010463's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSJJAG00000010463Msi15044.444ENSJJAG00000000674-7639.744
ENSJJAG00000010463Msi15043.750ENSJJAG00000000423-7543.750
ENSJJAG00000010463Msi15439.474ENSJJAG00000011893Tra2b6937.179
ENSJJAG00000010463Msi15240.686ENSJJAG00000000149Hnrnpa36741.509
ENSJJAG00000010463Msi15437.915ENSJJAG00000002569-7734.296
ENSJJAG00000010463Msi15242.246ENSJJAG00000006954Hnrnpa07638.938
ENSJJAG00000010463Msi15438.542ENSJJAG00000023987-7435.270
ENSJJAG00000010463Msi15035.052ENSJJAG00000014196-5433.133
ENSJJAG00000010463Msi15042.308ENSJJAG00000024047-7539.004
ENSJJAG00000010463Msi15037.430ENSJJAG00000023126-7435.000
ENSJJAG00000010463Msi15341.146ENSJJAG00000017750-6041.146
ENSJJAG00000010463Msi15050.980ENSJJAG00000018972-6840.000
ENSJJAG00000010463Msi16262.222ENSJJAG00000006292-10062.896
ENSJJAG00000010463Msi15341.063ENSJJAG00000000715Dazap15141.063
ENSJJAG00000010463Msi15045.251ENSJJAG00000023387Hnrnpd8240.161
ENSJJAG00000010463Msi110084.530ENSJJAG00000010643-10084.254
ENSJJAG00000010463Msi15042.308ENSJJAG00000018392-5843.386
ENSJJAG00000010463Msi15040.782ENSJJAG00000022256-5940.782
ENSJJAG00000010463Msi15033.333ENSJJAG00000019688-9732.099
ENSJJAG00000010463Msi15236.170ENSJJAG00000016030-5937.500
ENSJJAG00000010463Msi15035.359ENSJJAG00000001446-7333.588
ENSJJAG00000010463Msi15043.017ENSJJAG00000000278-6439.381
ENSJJAG00000010463Msi15233.333ENSJJAG00000018536-6832.422
ENSJJAG00000010463Msi15238.624ENSJJAG00000002566-9433.007
ENSJJAG00000010463Msi15039.041ENSJJAG00000017527-6236.269
ENSJJAG00000010463Msi15041.111ENSJJAG00000012306-5839.665
ENSJJAG00000010463Msi15047.222ENSJJAG00000021673Hnrnpdl5739.271
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSJJAG00000010463Msi1100100.000ENSG00000135097MSI1100100.000Homo_sapiens
ENSJJAG00000010463Msi110084.254ENSAPOG00000023458-10084.254Acanthochromis_polyacanthus
ENSJJAG00000010463Msi110083.791ENSAPOG00000003191MSI110083.791Acanthochromis_polyacanthus
ENSJJAG00000010463Msi19882.447ENSAMEG00000013302MSI110082.447Ailuropoda_melanoleuca
ENSJJAG00000010463Msi19483.951ENSACIG00000017754-7883.951Amphilophus_citrinellus
ENSJJAG00000010463Msi110083.791ENSAOCG00000003804MSI110083.791Amphiprion_ocellaris
ENSJJAG00000010463Msi19878.338ENSAOCG00000009031-9579.228Amphiprion_ocellaris
ENSJJAG00000010463Msi110083.791ENSAPEG00000003245MSI110083.791Amphiprion_percula
ENSJJAG00000010463Msi110084.254ENSAPEG00000006857-8484.254Amphiprion_percula
ENSJJAG00000010463Msi110078.689ENSATEG00000023779-10078.689Anabas_testudineus
ENSJJAG00000010463Msi110080.435ENSATEG00000017059MSI110080.435Anabas_testudineus
ENSJJAG00000010463Msi110096.419ENSACAG00000002762MSI110096.419Anolis_carolinensis
ENSJJAG00000010463Msi1100100.000ENSANAG00000027151MSI1100100.000Aotus_nancymaae
ENSJJAG00000010463Msi18296.309ENSANAG00000027901-9296.309Aotus_nancymaae
ENSJJAG00000010463Msi110083.242ENSACLG00000011230MSI110083.242Astatotilapia_calliptera
ENSJJAG00000010463Msi110083.978ENSACLG00000000117-10085.337Astatotilapia_calliptera
ENSJJAG00000010463Msi19881.346ENSAMXG00000038960msi17683.735Astyanax_mexicanus
ENSJJAG00000010463Msi1100100.000ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSJJAG00000010463Msi1100100.000ENSCJAG00000008578MSI1100100.000Callithrix_jacchus
ENSJJAG00000010463Msi110099.724ENSCAFG00000010283MSI110099.724Canis_familiaris
ENSJJAG00000010463Msi194100.000ENSCAFG00020020585MSI1100100.000Canis_lupus_dingo
ENSJJAG00000010463Msi110095.890ENSCHIG00000024304MSI110095.890Capra_hircus
ENSJJAG00000010463Msi194100.000ENSTSYG00000033949MSI195100.000Carlito_syrichta
ENSJJAG00000010463Msi19489.776ENSCAPG00000003919MSI18989.776Cavia_aperea
ENSJJAG00000010463Msi198100.000ENSCPOG00000012361MSI1100100.000Cavia_porcellus
ENSJJAG00000010463Msi1100100.000ENSCCAG00000035567MSI1100100.000Cebus_capucinus
ENSJJAG00000010463Msi1100100.000ENSCATG00000030019MSI1100100.000Cercocebus_atys
ENSJJAG00000010463Msi198100.000ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSJJAG00000010463Msi17596.390ENSCSAG00000002265MSI19696.390Chlorocebus_sabaeus
ENSJJAG00000010463Msi110095.856ENSCPBG00000011349MSI110095.856Chrysemys_picta_bellii
ENSJJAG00000010463Msi198100.000ENSCANG00000040651MSI1100100.000Colobus_angolensis_palliatus
ENSJJAG00000010463Msi1100100.000ENSCGRG00001018883Msi1100100.000Cricetulus_griseus_chok1gshd
ENSJJAG00000010463Msi194100.000ENSCGRG00000002191Msi172100.000Cricetulus_griseus_crigri
ENSJJAG00000010463Msi19879.464ENSCSEG00000011032MSI110079.464Cynoglossus_semilaevis
ENSJJAG00000010463Msi110083.149ENSCSEG00000008352-10083.149Cynoglossus_semilaevis
ENSJJAG00000010463Msi110083.516ENSCSEG00000005834-10083.516Cynoglossus_semilaevis
ENSJJAG00000010463Msi16468.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSJJAG00000010463Msi15061.194ENSCVAG00000017430zgc:1107969461.194Cyprinodon_variegatus
ENSJJAG00000010463Msi110084.254ENSCVAG00000009100MSI110084.254Cyprinodon_variegatus
ENSJJAG00000010463Msi19882.663ENSDARG00000010710msi110085.022Danio_rerio
ENSJJAG00000010463Msi18082.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSJJAG00000010463Msi19889.970ENSDNOG00000005713MSI19189.970Dasypus_novemcinctus
ENSJJAG00000010463Msi19899.102ENSDORG00000005610Msi19995.480Dipodomys_ordii
ENSJJAG00000010463Msi19895.732ENSETEG00000004756MSI110095.732Echinops_telfairi
ENSJJAG00000010463Msi1100100.000ENSEASG00005004736MSI1100100.000Equus_asinus_asinus
ENSJJAG00000010463Msi1100100.000ENSECAG00000017526MSI1100100.000Equus_caballus
ENSJJAG00000010463Msi19482.143ENSELUG00000023280-10081.845Esox_lucius
ENSJJAG00000010463Msi19878.729ENSELUG00000023219MSI19280.387Esox_lucius
ENSJJAG00000010463Msi1100100.000ENSFCAG00000011007MSI1100100.000Felis_catus
ENSJJAG00000010463Msi19895.820ENSFALG00000007574MSI110095.820Ficedula_albicollis
ENSJJAG00000010463Msi19899.695ENSFDAG00000019586MSI110099.695Fukomys_damarensis
ENSJJAG00000010463Msi110084.530ENSFHEG00000022446MSI110084.530Fundulus_heteroclitus
ENSJJAG00000010463Msi110083.791ENSFHEG00000003560-10083.791Fundulus_heteroclitus
ENSJJAG00000010463Msi110082.597ENSGMOG00000001006MSI19982.320Gadus_morhua
ENSJJAG00000010463Msi110076.584ENSGMOG00000017838-10076.584Gadus_morhua
ENSJJAG00000010463Msi19495.238ENSGALG00000007227MSI19886.957Gallus_gallus
ENSJJAG00000010463Msi110066.111ENSGAFG00000005860-10066.111Gambusia_affinis
ENSJJAG00000010463Msi19885.380ENSGAFG00000021522MSI19485.380Gambusia_affinis
ENSJJAG00000010463Msi110083.425ENSGACG00000012679MSI110083.425Gasterosteus_aculeatus
ENSJJAG00000010463Msi110080.663ENSGACG00000008674-10080.663Gasterosteus_aculeatus
ENSJJAG00000010463Msi110095.580ENSGAGG00000016037MSI110095.580Gopherus_agassizii
ENSJJAG00000010463Msi194100.000ENSGGOG00000010328MSI1100100.000Gorilla_gorilla
ENSJJAG00000010463Msi110083.978ENSHBUG00000011841-10083.978Haplochromis_burtoni
ENSJJAG00000010463Msi110083.242ENSHBUG00000021921MSI110083.242Haplochromis_burtoni
ENSJJAG00000010463Msi110099.724ENSHGLG00000012782MSI110099.724Heterocephalus_glaber_female
ENSJJAG00000010463Msi19899.695ENSHGLG00100016848MSI110099.695Heterocephalus_glaber_male
ENSJJAG00000010463Msi110078.689ENSHCOG00000012067-10078.689Hippocampus_comes
ENSJJAG00000010463Msi19882.143ENSHCOG00000012019MSI110082.143Hippocampus_comes
ENSJJAG00000010463Msi110082.320ENSIPUG00000001976msi110082.320Ictalurus_punctatus
ENSJJAG00000010463Msi194100.000ENSSTOG00000009799MSI1100100.000Ictidomys_tridecemlineatus
ENSJJAG00000010463Msi110083.702ENSKMAG00000011251MSI110083.702Kryptolebias_marmoratus
ENSJJAG00000010463Msi19884.821ENSKMAG00000019877-10084.821Kryptolebias_marmoratus
ENSJJAG00000010463Msi110083.242ENSLBEG00000001375-10083.242Labrus_bergylta
ENSJJAG00000010463Msi110084.254ENSLBEG00000008789MSI110084.254Labrus_bergylta
ENSJJAG00000010463Msi19887.427ENSLACG00000018287MSI110087.427Latimeria_chalumnae
ENSJJAG00000010463Msi15170.000ENSLOCG00000008618zgc:1107967170.000Lepisosteus_oculatus
ENSJJAG00000010463Msi19189.426ENSLAFG00000009412MSI110089.426Loxodonta_africana
ENSJJAG00000010463Msi198100.000ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSJJAG00000010463Msi19798.291ENSMMUG00000031527MSI19798.291Macaca_mulatta
ENSJJAG00000010463Msi1100100.000ENSMNEG00000040034MSI1100100.000Macaca_nemestrina
ENSJJAG00000010463Msi198100.000ENSMLEG00000003921MSI1100100.000Mandrillus_leucophaeus
ENSJJAG00000010463Msi110083.425ENSMAMG00000002279MSI110083.425Mastacembelus_armatus
ENSJJAG00000010463Msi19883.976ENSMAMG00000018426-10083.791Mastacembelus_armatus
ENSJJAG00000010463Msi110083.978ENSMZEG00005000340-10083.978Maylandia_zebra
ENSJJAG00000010463Msi110083.242ENSMZEG00005026892MSI110083.242Maylandia_zebra
ENSJJAG00000010463Msi16598.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSJJAG00000010463Msi171100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSJJAG00000010463Msi1100100.000ENSMICG00000033181MSI1100100.000Microcebus_murinus
ENSJJAG00000010463Msi110099.724ENSMOCG00000002286Msi110099.724Microtus_ochrogaster
ENSJJAG00000010463Msi19876.316ENSMMOG00000010492MSI19477.448Mola_mola
ENSJJAG00000010463Msi19882.822ENSMMOG00000012265-9782.822Mola_mola
ENSJJAG00000010463Msi19168.373ENSMODG00000003189-10068.373Monodelphis_domestica
ENSJJAG00000010463Msi19885.044ENSMALG00000001426-10085.044Monopterus_albus
ENSJJAG00000010463Msi110083.978ENSMALG00000017889MSI110083.978Monopterus_albus
ENSJJAG00000010463Msi110099.448MGP_CAROLIEiJ_G0027626Msi110099.448Mus_caroli
ENSJJAG00000010463Msi110099.448ENSMUSG00000054256Msi110099.448Mus_musculus
ENSJJAG00000010463Msi110099.171MGP_PahariEiJ_G0024206Msi110099.171Mus_pahari
ENSJJAG00000010463Msi110099.448MGP_SPRETEiJ_G0028624Msi110099.448Mus_spretus
ENSJJAG00000010463Msi194100.000ENSMPUG00000003168MSI1100100.000Mustela_putorius_furo
ENSJJAG00000010463Msi19886.310ENSMLUG00000010313MSI110090.179Myotis_lucifugus
ENSJJAG00000010463Msi19893.855ENSNGAG00000014508Msi19793.855Nannospalax_galili
ENSJJAG00000010463Msi18877.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSJJAG00000010463Msi110083.978ENSNBRG00000000841-10083.978Neolamprologus_brichardi
ENSJJAG00000010463Msi19189.634ENSNLEG00000015636MSI110089.634Nomascus_leucogenys
ENSJJAG00000010463Msi19477.744ENSMEUG00000015759MSI110077.744Notamacropus_eugenii
ENSJJAG00000010463Msi19492.063ENSOPRG00000016879MSI110092.063Ochotona_princeps
ENSJJAG00000010463Msi198100.000ENSODEG00000006328MSI1100100.000Octodon_degus
ENSJJAG00000010463Msi110083.978ENSONIG00000011182MSI110083.978Oreochromis_niloticus
ENSJJAG00000010463Msi110083.516ENSONIG00000019452-10083.516Oreochromis_niloticus
ENSJJAG00000010463Msi19499.678ENSOCUG00000027716MSI110099.678Oryctolagus_cuniculus
ENSJJAG00000010463Msi110084.530ENSORLG00000019978-10084.530Oryzias_latipes
ENSJJAG00000010463Msi110083.791ENSORLG00000029593MSI110083.791Oryzias_latipes
ENSJJAG00000010463Msi110083.791ENSORLG00020008266MSI19984.273Oryzias_latipes_hni
ENSJJAG00000010463Msi110084.530ENSORLG00020001208-7184.530Oryzias_latipes_hni
ENSJJAG00000010463Msi110084.530ENSORLG00015013672-7682.353Oryzias_latipes_hsok
ENSJJAG00000010463Msi110083.791ENSORLG00015003916MSI110083.791Oryzias_latipes_hsok
ENSJJAG00000010463Msi110084.807ENSOMEG00000017536MSI110084.807Oryzias_melastigma
ENSJJAG00000010463Msi19886.842ENSOMEG00000002272-10084.615Oryzias_melastigma
ENSJJAG00000010463Msi19995.604ENSOGAG00000003847MSI19995.604Otolemur_garnettii
ENSJJAG00000010463Msi19496.061ENSOARG00000012097MSI110096.061Ovis_aries
ENSJJAG00000010463Msi198100.000ENSPPAG00000043073MSI1100100.000Pan_paniscus
ENSJJAG00000010463Msi1100100.000ENSPPRG00000000370MSI1100100.000Panthera_pardus
ENSJJAG00000010463Msi194100.000ENSPTIG00000008913MSI1100100.000Panthera_tigris_altaica
ENSJJAG00000010463Msi1100100.000ENSPTRG00000005531MSI1100100.000Pan_troglodytes
ENSJJAG00000010463Msi110099.724ENSPANG00000006335MSI110099.724Papio_anubis
ENSJJAG00000010463Msi19685.879ENSPKIG00000023575-10083.978Paramormyrops_kingsleyae
ENSJJAG00000010463Msi110085.083ENSPKIG00000016497MSI110085.083Paramormyrops_kingsleyae
ENSJJAG00000010463Msi18092.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSJJAG00000010463Msi19892.105ENSPSIG00000011608-9392.105Pelodiscus_sinensis
ENSJJAG00000010463Msi19483.025ENSPMGG00000000514MSI19783.025Periophthalmus_magnuspinnatus
ENSJJAG00000010463Msi19869.617ENSPMGG00000007743-8972.271Periophthalmus_magnuspinnatus
ENSJJAG00000010463Msi19994.958ENSPEMG00000010491Msi19994.958Peromyscus_maniculatus_bairdii
ENSJJAG00000010463Msi110084.254ENSPFOG00000013113MSI110084.254Poecilia_formosa
ENSJJAG00000010463Msi110083.791ENSPFOG00000008319-8683.791Poecilia_formosa
ENSJJAG00000010463Msi110084.254ENSPLAG00000014025-10084.254Poecilia_latipinna
ENSJJAG00000010463Msi110083.791ENSPLAG00000012431-9783.791Poecilia_latipinna
ENSJJAG00000010463Msi110083.242ENSPMEG00000007025-9379.822Poecilia_mexicana
ENSJJAG00000010463Msi110084.254ENSPMEG00000012796MSI110084.254Poecilia_mexicana
ENSJJAG00000010463Msi16180.365ENSPREG00000014574-10080.365Poecilia_reticulata
ENSJJAG00000010463Msi19879.370ENSPREG00000021416-9878.249Poecilia_reticulata
ENSJJAG00000010463Msi110099.171ENSPPYG00000005027MSI110099.171Pongo_abelii
ENSJJAG00000010463Msi19876.923ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSJJAG00000010463Msi1100100.000ENSPCOG00000017341MSI1100100.000Propithecus_coquereli
ENSJJAG00000010463Msi19882.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSJJAG00000010463Msi110083.242ENSPNYG00000004379MSI110083.242Pundamilia_nyererei
ENSJJAG00000010463Msi110083.978ENSPNYG00000002529-10083.978Pundamilia_nyererei
ENSJJAG00000010463Msi110082.597ENSPNAG00000019337msi110082.597Pygocentrus_nattereri
ENSJJAG00000010463Msi19499.678ENSRNOG00000001156Msi110099.678Rattus_norvegicus
ENSJJAG00000010463Msi194100.000ENSRBIG00000036889MSI1100100.000Rhinopithecus_bieti
ENSJJAG00000010463Msi19499.697ENSRROG00000041076MSI19399.697Rhinopithecus_roxellana
ENSJJAG00000010463Msi198100.000ENSSBOG00000030259MSI198100.000Saimiri_boliviensis_boliviensis
ENSJJAG00000010463Msi19487.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSJJAG00000010463Msi19886.842ENSSFOG00015014964-9586.842Scleropages_formosus
ENSJJAG00000010463Msi19885.380ENSSFOG00015005350MSI110085.119Scleropages_formosus
ENSJJAG00000010463Msi19485.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSJJAG00000010463Msi19883.025ENSSMAG00000018824MSI19783.025Scophthalmus_maximus
ENSJJAG00000010463Msi110084.254ENSSDUG00000001027MSI110084.254Seriola_dumerili
ENSJJAG00000010463Msi110083.516ENSSDUG00000022697-10083.516Seriola_dumerili
ENSJJAG00000010463Msi110084.254ENSSLDG00000016832MSI110084.254Seriola_lalandi_dorsalis
ENSJJAG00000010463Msi19882.209ENSSLDG00000018706-9783.486Seriola_lalandi_dorsalis
ENSJJAG00000010463Msi110095.028ENSSPUG00000015741MSI110095.028Sphenodon_punctatus
ENSJJAG00000010463Msi19886.217ENSSPAG00000013098-10086.217Stegastes_partitus
ENSJJAG00000010463Msi16169.863ENSSPAG00000014085-10070.320Stegastes_partitus
ENSJJAG00000010463Msi15374.375ENSSPAG00000015573zgc:1107968274.375Stegastes_partitus
ENSJJAG00000010463Msi110099.724ENSSSCG00000029365MSI110099.724Sus_scrofa
ENSJJAG00000010463Msi19896.784ENSTGUG00000009534MSI110096.784Taeniopygia_guttata
ENSJJAG00000010463Msi18180.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSJJAG00000010463Msi19475.988ENSTRUG00000015636-7977.469Takifugu_rubripes
ENSJJAG00000010463Msi110079.178ENSTNIG00000011469MSI110079.178Tetraodon_nigroviridis
ENSJJAG00000010463Msi19863.243ENSTNIG00000019814-9963.243Tetraodon_nigroviridis
ENSJJAG00000010463Msi19489.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSJJAG00000010463Msi19881.287ENSTTRG00000005663MSI110081.287Tursiops_truncatus
ENSJJAG00000010463Msi166100.000ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSJJAG00000010463Msi19894.212ENSUMAG00000006176MSI19094.212Ursus_maritimus
ENSJJAG00000010463Msi19899.099ENSVVUG00000020993MSI110099.099Vulpes_vulpes
ENSJJAG00000010463Msi110091.209ENSXETG00000012216msi110091.257Xenopus_tropicalis
ENSJJAG00000010463Msi19472.997ENSXCOG00000017605MSI18972.997Xiphophorus_couchianus
ENSJJAG00000010463Msi110083.516ENSXMAG00000018237-10083.516Xiphophorus_maculatus
ENSJJAG00000010463Msi110084.254ENSXMAG00000027103MSI110075.000Xiphophorus_maculatus

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