EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000010502 (Gene tree)
Gene ID: 101597969
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 255 bases
Position: chrJH725449.1:14536471-14536725
Accession: 101597969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000005590	LSM	PF01423.22	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000011969	-	255	XM_012947860	ENSJJAP00000005590	84 (aa)	XP_012803314	UPI00064D1495

Gene Model

Click here to download ENSJJAG00000010502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000010502	-	87	35.616	ENSJJAG00000016942	-	92	35.616
ENSJJAG00000010502	-	86	43.056	ENSJJAG00000011211	-	90	43.056
ENSJJAG00000010502	-	100	77.381	ENSJJAG00000004558	-	100	77.381
ENSJJAG00000010502	-	80	47.761	ENSJJAG00000013845	-	84	47.761
ENSJJAG00000010502	-	76	84.375	ENSJJAG00000004828	-	98	84.375
ENSJJAG00000010502	-	89	86.667	ENSJJAG00000011272	-	100	84.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000010502	-	89	86.667	ENSG00000139343	SNRPF	100	84.884	Homo_sapiens
ENSJJAG00000010502	-	88	83.784	ENSAPOG00000003377	snrpf	66	82.353	Acanthochromis_polyacanthus
ENSJJAG00000010502	-	88	86.486	ENSAMEG00000002166	-	100	84.706	Ailuropoda_melanoleuca
ENSJJAG00000010502	-	90	77.632	ENSAMEG00000018718	-	100	77.907	Ailuropoda_melanoleuca
ENSJJAG00000010502	-	87	83.562	ENSACIG00000013216	snrpf	99	82.143	Amphilophus_citrinellus
ENSJJAG00000010502	-	87	83.562	ENSAOCG00000015108	snrpf	99	82.143	Amphiprion_ocellaris
ENSJJAG00000010502	-	87	83.562	ENSAPEG00000022022	snrpf	99	82.143	Amphiprion_percula
ENSJJAG00000010502	-	87	83.562	ENSATEG00000022625	snrpf	90	82.143	Anabas_testudineus
ENSJJAG00000010502	-	88	85.135	ENSACAG00000014073	SNRPF	98	83.529	Anolis_carolinensis
ENSJJAG00000010502	-	85	81.690	ENSANAG00000020297	-	75	80.488	Aotus_nancymaae
ENSJJAG00000010502	-	89	86.667	ENSANAG00000032845	SNRPF	100	84.884	Aotus_nancymaae
ENSJJAG00000010502	-	89	56.000	ENSANAG00000025860	-	100	56.977	Aotus_nancymaae
ENSJJAG00000010502	-	87	83.562	ENSACLG00000016066	snrpf	99	82.143	Astatotilapia_calliptera
ENSJJAG00000010502	-	89	81.333	ENSAMXG00000007421	snrpf	100	80.233	Astyanax_mexicanus
ENSJJAG00000010502	-	89	86.667	ENSBTAG00000016271	SNRPF	100	84.884	Bos_taurus
ENSJJAG00000010502	-	96	77.778	ENSBTAG00000050012	-	100	77.778	Bos_taurus
ENSJJAG00000010502	-	92	64.935	WBGene00004918	snr-5	87	64.935	Caenorhabditis_elegans
ENSJJAG00000010502	-	89	86.667	ENSCJAG00000002705	-	100	84.884	Callithrix_jacchus
ENSJJAG00000010502	-	89	86.667	ENSCAFG00000006395	-	77	84.884	Canis_familiaris
ENSJJAG00000010502	-	86	81.944	ENSCAFG00000031151	-	100	79.070	Canis_familiaris
ENSJJAG00000010502	-	86	81.944	ENSCAFG00020010823	-	100	79.070	Canis_lupus_dingo
ENSJJAG00000010502	-	86	84.722	ENSCAFG00020013161	-	77	84.722	Canis_lupus_dingo
ENSJJAG00000010502	-	89	80.263	ENSTSYG00000036502	-	100	79.310	Carlito_syrichta
ENSJJAG00000010502	-	96	79.012	ENSTSYG00000031636	-	68	79.012	Carlito_syrichta
ENSJJAG00000010502	-	89	78.667	ENSTSYG00000030635	-	100	77.907	Carlito_syrichta
ENSJJAG00000010502	-	88	86.486	ENSCAPG00000007242	SNRPF	100	84.706	Cavia_aperea
ENSJJAG00000010502	-	89	86.667	ENSCPOG00000013898	SNRPF	100	84.884	Cavia_porcellus
ENSJJAG00000010502	-	86	87.500	ENSCCAG00000017356	-	100	84.884	Cebus_capucinus
ENSJJAG00000010502	-	89	86.667	ENSCCAG00000037378	-	100	84.884	Cebus_capucinus
ENSJJAG00000010502	-	100	76.744	ENSCCAG00000033627	-	68	76.744	Cebus_capucinus
ENSJJAG00000010502	-	89	86.667	ENSCLAG00000007200	SNRPF	100	84.884	Chinchilla_lanigera
ENSJJAG00000010502	-	89	86.667	ENSCSAG00000003602	-	70	84.884	Chlorocebus_sabaeus
ENSJJAG00000010502	-	76	87.500	ENSCHOG00000009392	SNRPF	100	87.500	Choloepus_hoffmanni
ENSJJAG00000010502	-	89	78.667	ENSCPBG00000006227	-	100	76.744	Chrysemys_picta_bellii
ENSJJAG00000010502	-	99	83.133	ENSCPBG00000024287	-	67	83.133	Chrysemys_picta_bellii
ENSJJAG00000010502	-	100	79.070	ENSCPBG00000026463	-	100	79.070	Chrysemys_picta_bellii
ENSJJAG00000010502	-	100	77.381	ENSCPBG00000001985	-	100	77.381	Chrysemys_picta_bellii
ENSJJAG00000010502	-	99	76.471	ENSCSAVG00000007498	-	97	76.471	Ciona_savignyi
ENSJJAG00000010502	-	89	81.333	ENSCGRG00001008965	-	67	80.233	Cricetulus_griseus_chok1gshd
ENSJJAG00000010502	-	89	86.667	ENSCGRG00001017100	-	100	84.884	Cricetulus_griseus_chok1gshd
ENSJJAG00000010502	-	89	86.667	ENSCGRG00000000336	-	100	84.884	Cricetulus_griseus_crigri
ENSJJAG00000010502	-	94	79.747	ENSCGRG00000018878	-	99	79.747	Cricetulus_griseus_crigri
ENSJJAG00000010502	-	89	82.667	ENSCSEG00000004748	snrpf	100	81.395	Cynoglossus_semilaevis
ENSJJAG00000010502	-	88	83.784	ENSCVAG00000000397	snrpf	67	82.353	Cyprinodon_variegatus
ENSJJAG00000010502	-	89	81.818	ENSDARG00000105037	snrpf	100	80.682	Danio_rerio
ENSJJAG00000010502	-	89	86.667	ENSDNOG00000043775	-	55	84.884	Dasypus_novemcinctus
ENSJJAG00000010502	-	89	88.000	ENSDNOG00000048989	-	77	86.047	Dasypus_novemcinctus
ENSJJAG00000010502	-	89	72.000	ENSDNOG00000049373	-	75	69.767	Dasypus_novemcinctus
ENSJJAG00000010502	-	86	81.944	ENSDORG00000025351	-	100	81.944	Dipodomys_ordii
ENSJJAG00000010502	-	70	86.441	ENSDORG00000029740	-	85	84.286	Dipodomys_ordii
ENSJJAG00000010502	-	98	70.238	FBgn0000426	SmF	95	70.238	Drosophila_melanogaster
ENSJJAG00000010502	-	89	86.667	ENSETEG00000001558	-	100	84.884	Echinops_telfairi
ENSJJAG00000010502	-	94	65.823	ENSEBUG00000001793	-	85	65.823	Eptatretus_burgeri
ENSJJAG00000010502	-	89	86.667	ENSECAG00000019817	SNRPF	70	84.884	Equus_caballus
ENSJJAG00000010502	-	88	86.486	ENSEEUG00000013509	SNRPF	100	84.706	Erinaceus_europaeus
ENSJJAG00000010502	-	89	81.333	ENSELUG00000003121	RUXF	100	80.233	Esox_lucius
ENSJJAG00000010502	-	100	76.744	ENSELUG00000007737	RUXF	99	76.744	Esox_lucius
ENSJJAG00000010502	-	89	86.667	ENSFCAG00000029966	-	100	84.884	Felis_catus
ENSJJAG00000010502	-	89	65.333	ENSFCAG00000021942	-	100	66.279	Felis_catus
ENSJJAG00000010502	-	98	67.857	ENSFCAG00000031148	-	77	67.857	Felis_catus
ENSJJAG00000010502	-	88	86.486	ENSFALG00000010799	SNRPF	99	84.706	Ficedula_albicollis
ENSJJAG00000010502	-	89	86.667	ENSFDAG00000002831	-	100	84.884	Fukomys_damarensis
ENSJJAG00000010502	-	88	83.784	ENSFHEG00000003240	snrpf	75	82.353	Fundulus_heteroclitus
ENSJJAG00000010502	-	88	83.784	ENSGMOG00000007741	snrpf	100	82.353	Gadus_morhua
ENSJJAG00000010502	-	89	86.667	ENSGALG00000011409	SNRPF	100	84.884	Gallus_gallus
ENSJJAG00000010502	-	87	83.562	ENSGAFG00000016187	snrpf	97	82.143	Gambusia_affinis
ENSJJAG00000010502	-	88	82.432	ENSGACG00000020055	snrpf	100	81.176	Gasterosteus_aculeatus
ENSJJAG00000010502	-	69	82.759	ENSGAGG00000011163	-	100	82.759	Gopherus_agassizii
ENSJJAG00000010502	-	92	84.416	ENSGAGG00000022991	-	89	84.416	Gopherus_agassizii
ENSJJAG00000010502	-	86	83.333	ENSGAGG00000012945	-	77	82.143	Gopherus_agassizii
ENSJJAG00000010502	-	74	83.871	ENSGAGG00000020974	-	52	83.871	Gopherus_agassizii
ENSJJAG00000010502	-	82	79.710	ENSGAGG00000014132	-	100	71.429	Gopherus_agassizii
ENSJJAG00000010502	-	98	71.429	ENSGGOG00000039936	-	95	71.429	Gorilla_gorilla
ENSJJAG00000010502	-	94	63.291	ENSGGOG00000039564	-	96	63.291	Gorilla_gorilla
ENSJJAG00000010502	-	89	86.667	ENSGGOG00000001127	-	100	84.884	Gorilla_gorilla
ENSJJAG00000010502	-	89	86.667	ENSHGLG00000009108	SNRPF	100	84.884	Heterocephalus_glaber_female
ENSJJAG00000010502	-	89	85.333	ENSHGLG00000021172	-	100	83.721	Heterocephalus_glaber_female
ENSJJAG00000010502	-	89	85.333	ENSHGLG00100019596	-	100	83.721	Heterocephalus_glaber_male
ENSJJAG00000010502	-	88	86.486	ENSHGLG00100008103	-	100	84.706	Heterocephalus_glaber_male
ENSJJAG00000010502	-	75	74.286	ENSHCOG00000018663	snrpf	55	74.286	Hippocampus_comes
ENSJJAG00000010502	-	89	84.000	ENSIPUG00000018994	snrpf	100	82.558	Ictalurus_punctatus
ENSJJAG00000010502	-	89	86.667	ENSSTOG00000010434	-	100	84.884	Ictidomys_tridecemlineatus
ENSJJAG00000010502	-	89	82.667	ENSKMAG00000013566	snrpf	100	81.395	Kryptolebias_marmoratus
ENSJJAG00000010502	-	89	82.667	ENSLBEG00000008800	snrpf	100	81.395	Labrus_bergylta
ENSJJAG00000010502	-	89	85.333	ENSLACG00000002456	-	74	83.721	Latimeria_chalumnae
ENSJJAG00000010502	-	89	81.333	ENSLOCG00000015744	snrpf	100	80.233	Lepisosteus_oculatus
ENSJJAG00000010502	-	88	86.486	ENSLAFG00000017426	SNRPF	99	84.706	Loxodonta_africana
ENSJJAG00000010502	-	87	82.192	ENSMAMG00000016593	snrpf	99	80.952	Mastacembelus_armatus
ENSJJAG00000010502	-	87	83.562	ENSMZEG00005014701	snrpf	99	82.143	Maylandia_zebra
ENSJJAG00000010502	-	87	86.301	ENSMGAG00000011453	-	76	84.524	Meleagris_gallopavo
ENSJJAG00000010502	-	70	84.746	ENSMAUG00000010289	-	76	84.746	Mesocricetus_auratus
ENSJJAG00000010502	-	75	87.302	ENSMAUG00000019737	-	100	85.135	Mesocricetus_auratus
ENSJJAG00000010502	-	75	87.302	ENSMAUG00000016909	-	100	85.135	Mesocricetus_auratus
ENSJJAG00000010502	-	89	81.333	ENSMAUG00000008799	-	100	80.233	Mesocricetus_auratus
ENSJJAG00000010502	-	89	86.667	ENSMICG00000012153	-	100	84.884	Microcebus_murinus
ENSJJAG00000010502	-	89	84.000	ENSMICG00000030494	-	69	82.558	Microcebus_murinus
ENSJJAG00000010502	-	89	73.333	ENSMOCG00000022166	-	90	73.171	Microtus_ochrogaster
ENSJJAG00000010502	-	81	70.588	ENSMOCG00000020220	-	100	71.795	Microtus_ochrogaster
ENSJJAG00000010502	-	89	86.667	ENSMOCG00000020437	Snrpf	100	84.884	Microtus_ochrogaster
ENSJJAG00000010502	-	88	82.432	ENSMMOG00000007127	snrpf	100	81.176	Mola_mola
ENSJJAG00000010502	-	89	86.667	ENSMODG00000008091	SNRPF	75	84.884	Monodelphis_domestica
ENSJJAG00000010502	-	87	83.562	ENSMALG00000012328	snrpf	99	82.143	Monopterus_albus
ENSJJAG00000010502	-	89	86.667	MGP_CAROLIEiJ_G0015735	-	100	84.884	Mus_caroli
ENSJJAG00000010502	-	89	86.667	ENSMUSG00000020018	Snrpf	100	84.884	Mus_musculus
ENSJJAG00000010502	-	89	86.667	MGP_PahariEiJ_G0031350	Snrpf	100	84.884	Mus_pahari
ENSJJAG00000010502	-	89	86.667	MGP_SPRETEiJ_G0016553	Snrpf	100	84.884	Mus_spretus
ENSJJAG00000010502	-	89	86.667	ENSMPUG00000007176	-	77	84.884	Mustela_putorius_furo
ENSJJAG00000010502	-	89	86.667	ENSMLUG00000029201	-	81	84.884	Myotis_lucifugus
ENSJJAG00000010502	-	89	86.667	ENSMLUG00000026149	-	81	84.884	Myotis_lucifugus
ENSJJAG00000010502	-	89	86.667	ENSMLUG00000027932	-	81	84.884	Myotis_lucifugus
ENSJJAG00000010502	-	88	86.486	ENSMLUG00000013577	-	100	84.706	Myotis_lucifugus
ENSJJAG00000010502	-	100	67.442	ENSMLUG00000026269	-	81	67.442	Myotis_lucifugus
ENSJJAG00000010502	-	89	86.667	ENSNGAG00000024292	-	100	84.884	Nannospalax_galili
ENSJJAG00000010502	-	75	79.365	ENSNGAG00000005851	-	74	79.365	Nannospalax_galili
ENSJJAG00000010502	-	88	83.784	ENSNBRG00000011682	snrpf	87	82.353	Neolamprologus_brichardi
ENSJJAG00000010502	-	88	58.108	ENSMEUG00000000671	SNRPF	100	60.000	Notamacropus_eugenii
ENSJJAG00000010502	-	89	86.667	ENSODEG00000010328	-	100	84.884	Octodon_degus
ENSJJAG00000010502	-	89	85.333	ENSOCUG00000010925	SNRPF	76	83.721	Oryctolagus_cuniculus
ENSJJAG00000010502	-	88	81.081	ENSORLG00020008216	snrpf	100	80.000	Oryzias_latipes_hni
ENSJJAG00000010502	-	88	81.081	ENSORLG00015007418	snrpf	100	80.000	Oryzias_latipes_hsok
ENSJJAG00000010502	-	87	82.192	ENSOMEG00000003018	snrpf	99	80.952	Oryzias_melastigma
ENSJJAG00000010502	-	89	86.667	ENSOGAG00000030323	-	100	83.721	Otolemur_garnettii
ENSJJAG00000010502	-	89	86.667	ENSOARG00000011853	-	75	84.884	Ovis_aries
ENSJJAG00000010502	-	98	71.429	ENSPPAG00000037544	-	95	69.048	Pan_paniscus
ENSJJAG00000010502	-	94	67.089	ENSPPAG00000037479	-	96	67.089	Pan_paniscus
ENSJJAG00000010502	-	98	67.857	ENSPPRG00000007449	-	86	67.857	Panthera_pardus
ENSJJAG00000010502	-	89	86.667	ENSPPRG00000005875	-	100	84.884	Panthera_pardus
ENSJJAG00000010502	-	98	69.048	ENSPTIG00000005117	-	100	69.048	Panthera_tigris_altaica
ENSJJAG00000010502	-	89	86.667	ENSPTIG00000007520	SNRPF	100	84.884	Panthera_tigris_altaica
ENSJJAG00000010502	-	94	64.557	ENSPTRG00000047717	-	96	64.557	Pan_troglodytes
ENSJJAG00000010502	-	98	71.429	ENSPTRG00000043814	-	95	69.048	Pan_troglodytes
ENSJJAG00000010502	-	88	83.784	ENSPKIG00000014784	snrpf	93	82.353	Paramormyrops_kingsleyae
ENSJJAG00000010502	-	88	86.486	ENSPSIG00000016462	SNRPF	99	84.706	Pelodiscus_sinensis
ENSJJAG00000010502	-	88	82.432	ENSPMGG00000023548	snrpf	100	81.176	Periophthalmus_magnuspinnatus
ENSJJAG00000010502	-	89	86.667	ENSPEMG00000023326	Snrpf	100	84.884	Peromyscus_maniculatus_bairdii
ENSJJAG00000010502	-	87	83.562	ENSPLAG00000023932	snrpf	99	82.143	Poecilia_latipinna
ENSJJAG00000010502	-	87	83.562	ENSPMEG00000003377	snrpf	99	82.143	Poecilia_mexicana
ENSJJAG00000010502	-	87	83.562	ENSPREG00000022635	snrpf	97	82.143	Poecilia_reticulata
ENSJJAG00000010502	-	89	86.667	ENSPPYG00000004847	-	100	84.884	Pongo_abelii
ENSJJAG00000010502	-	89	86.667	ENSPCOG00000023833	-	100	84.884	Propithecus_coquereli
ENSJJAG00000010502	-	89	86.667	ENSPVAG00000009036	SNRPF	100	84.884	Pteropus_vampyrus
ENSJJAG00000010502	-	87	83.562	ENSPNYG00000021712	snrpf	99	82.143	Pundamilia_nyererei
ENSJJAG00000010502	-	87	82.192	ENSPNAG00000019117	snrpf	99	80.952	Pygocentrus_nattereri
ENSJJAG00000010502	-	89	86.667	ENSRNOG00000005556	Snrpf	100	84.884	Rattus_norvegicus
ENSJJAG00000010502	-	89	86.667	ENSRBIG00000030414	-	100	83.721	Rhinopithecus_bieti
ENSJJAG00000010502	-	89	86.667	ENSRROG00000021975	-	100	83.721	Rhinopithecus_roxellana
ENSJJAG00000010502	-	81	50.725	YPR182W	SMX3	80	50.725	Saccharomyces_cerevisiae
ENSJJAG00000010502	-	89	86.667	ENSSBOG00000036179	-	100	84.884	Saimiri_boliviensis_boliviensis
ENSJJAG00000010502	-	89	86.667	ENSSBOG00000012868	-	100	84.884	Saimiri_boliviensis_boliviensis
ENSJJAG00000010502	-	89	73.333	ENSSBOG00000032297	-	100	73.256	Saimiri_boliviensis_boliviensis
ENSJJAG00000010502	-	89	71.795	ENSSBOG00000027638	-	100	71.910	Saimiri_boliviensis_boliviensis
ENSJJAG00000010502	-	88	86.486	ENSSHAG00000012294	SNRPF	77	84.706	Sarcophilus_harrisii
ENSJJAG00000010502	-	76	84.375	ENSSFOG00015021523	snrpf	96	84.375	Scleropages_formosus
ENSJJAG00000010502	-	89	81.333	ENSSMAG00000005533	snrpf	99	80.233	Scophthalmus_maximus
ENSJJAG00000010502	-	77	84.615	ENSSDUG00000016283	snrpf	77	84.615	Seriola_dumerili
ENSJJAG00000010502	-	89	82.667	ENSSLDG00000005119	snrpf	100	81.395	Seriola_lalandi_dorsalis
ENSJJAG00000010502	-	95	63.750	ENSSLDG00000003885	-	98	63.750	Seriola_lalandi_dorsalis
ENSJJAG00000010502	-	87	86.301	ENSSPUG00000014590	-	99	84.524	Sphenodon_punctatus
ENSJJAG00000010502	-	88	83.784	ENSSPAG00000003283	snrpf	97	82.353	Stegastes_partitus
ENSJJAG00000010502	-	89	86.667	ENSSSCG00000000895	SNRPF	100	84.884	Sus_scrofa
ENSJJAG00000010502	-	69	81.034	ENSTRUG00000014956	snrpf	100	79.710	Takifugu_rubripes
ENSJJAG00000010502	-	89	82.667	ENSTNIG00000012672	snrpf	100	81.395	Tetraodon_nigroviridis
ENSJJAG00000010502	-	89	58.667	ENSTTRG00000006070	SNRPF	100	60.465	Tursiops_truncatus
ENSJJAG00000010502	-	89	86.667	ENSUAMG00000008176	-	100	84.884	Ursus_americanus
ENSJJAG00000010502	-	100	75.294	ENSUAMG00000001101	-	100	75.294	Ursus_americanus
ENSJJAG00000010502	-	89	86.667	ENSUMAG00000003528	-	100	84.884	Ursus_maritimus
ENSJJAG00000010502	-	89	77.333	ENSUMAG00000006177	-	100	74.118	Ursus_maritimus
ENSJJAG00000010502	-	89	86.667	ENSVPAG00000008712	-	100	84.884	Vicugna_pacos
ENSJJAG00000010502	-	93	82.051	ENSVVUG00000023821	-	100	82.051	Vulpes_vulpes
ENSJJAG00000010502	-	88	63.158	ENSXETG00000021630	snrpf	100	64.368	Xenopus_tropicalis
ENSJJAG00000010502	-	87	83.562	ENSXCOG00000013860	snrpf	97	82.143	Xiphophorus_couchianus
ENSJJAG00000010502	-	87	83.562	ENSXMAG00000015448	snrpf	99	82.143	Xiphophorus_maculatus