EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000010667 (Gene tree)
Gene ID: 101606034
Gene Symbol: Rtcb
Alias: D10Wsu52e|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 22980 bases
Position: chrJH725438.1:58401258-58424237
Accession: 101606034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000005839	RtcB	PF01139.17	3.3e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000012224	-	1580	XM_004650250	ENSJJAP00000005839	505 (aa)	XP_004650307	UPI000333190D

Gene Model

Click here to download ENSJJAG00000010667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010667's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000010667	Rtcb	100	99.010	ENSG00000100220	RTCB	100	99.010	Homo_sapiens
ENSJJAG00000010667	Rtcb	100	94.851	ENSAPOG00000006040	rtcb	100	94.851	Acanthochromis_polyacanthus
ENSJJAG00000010667	Rtcb	100	98.812	ENSAMEG00000016152	RTCB	100	98.812	Ailuropoda_melanoleuca
ENSJJAG00000010667	Rtcb	100	90.297	ENSACIG00000009083	rtcb	100	90.297	Amphilophus_citrinellus
ENSJJAG00000010667	Rtcb	100	95.050	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSJJAG00000010667	Rtcb	96	89.938	ENSAPEG00000024653	rtcb	100	89.938	Amphiprion_percula
ENSJJAG00000010667	Rtcb	100	95.050	ENSAPEG00000024701	rtcb	100	95.050	Amphiprion_percula
ENSJJAG00000010667	Rtcb	100	94.455	ENSATEG00000000618	rtcb	100	94.455	Anabas_testudineus
ENSJJAG00000010667	Rtcb	100	93.642	ENSACAG00000014817	RTCB	100	93.642	Anolis_carolinensis
ENSJJAG00000010667	Rtcb	100	82.970	ENSANAG00000018191	-	91	82.970	Aotus_nancymaae
ENSJJAG00000010667	Rtcb	72	94.444	ENSANAG00000023724	-	100	62.451	Aotus_nancymaae
ENSJJAG00000010667	Rtcb	100	93.663	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSJJAG00000010667	Rtcb	100	94.653	ENSAMXG00000042320	rtcb	100	94.653	Astyanax_mexicanus
ENSJJAG00000010667	Rtcb	100	99.010	ENSBTAG00000011070	RTCB	100	99.010	Bos_taurus
ENSJJAG00000010667	Rtcb	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSJJAG00000010667	Rtcb	100	99.010	ENSCJAG00000006128	RTCB	100	99.010	Callithrix_jacchus
ENSJJAG00000010667	Rtcb	100	94.455	ENSCAFG00000010789	-	100	94.455	Canis_familiaris
ENSJJAG00000010667	Rtcb	100	98.812	ENSCAFG00000001785	RTCB	100	98.812	Canis_familiaris
ENSJJAG00000010667	Rtcb	100	98.812	ENSCAFG00020004890	-	100	98.812	Canis_lupus_dingo
ENSJJAG00000010667	Rtcb	87	95.227	ENSCAFG00020018953	-	99	95.227	Canis_lupus_dingo
ENSJJAG00000010667	Rtcb	100	98.812	ENSCHIG00000027009	-	100	98.812	Capra_hircus
ENSJJAG00000010667	Rtcb	100	98.812	ENSTSYG00000012320	RTCB	100	98.812	Carlito_syrichta
ENSJJAG00000010667	Rtcb	94	98.532	ENSCAPG00000011647	RTCB	96	98.532	Cavia_aperea
ENSJJAG00000010667	Rtcb	100	99.010	ENSCCAG00000000618	RTCB	100	99.010	Cebus_capucinus
ENSJJAG00000010667	Rtcb	100	99.010	ENSCATG00000033424	RTCB	100	99.010	Cercocebus_atys
ENSJJAG00000010667	Rtcb	100	98.812	ENSCLAG00000007997	RTCB	100	98.812	Chinchilla_lanigera
ENSJJAG00000010667	Rtcb	100	98.812	ENSCSAG00000008351	RTCB	100	98.812	Chlorocebus_sabaeus
ENSJJAG00000010667	Rtcb	100	84.356	ENSCHOG00000009123	RTCB	100	84.356	Choloepus_hoffmanni
ENSJJAG00000010667	Rtcb	100	96.436	ENSCPBG00000023184	RTCB	100	96.436	Chrysemys_picta_bellii
ENSJJAG00000010667	Rtcb	100	81.386	ENSCING00000003830	-	100	81.386	Ciona_intestinalis
ENSJJAG00000010667	Rtcb	100	81.782	ENSCSAVG00000008124	-	99	81.782	Ciona_savignyi
ENSJJAG00000010667	Rtcb	100	95.248	ENSCANG00000001891	RTCB	100	95.248	Colobus_angolensis_palliatus
ENSJJAG00000010667	Rtcb	100	99.208	ENSCGRG00001011173	Rtcb	100	99.208	Cricetulus_griseus_chok1gshd
ENSJJAG00000010667	Rtcb	93	99.363	ENSCGRG00000009587	-	96	99.363	Cricetulus_griseus_crigri
ENSJJAG00000010667	Rtcb	100	93.663	ENSCSEG00000003986	rtcb	100	93.663	Cynoglossus_semilaevis
ENSJJAG00000010667	Rtcb	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSJJAG00000010667	Rtcb	100	94.257	ENSDARG00000101047	rtcb	100	94.257	Danio_rerio
ENSJJAG00000010667	Rtcb	80	95.823	ENSDNOG00000012425	RTCB	99	95.823	Dasypus_novemcinctus
ENSJJAG00000010667	Rtcb	100	98.416	ENSDORG00000010855	Rtcb	100	98.416	Dipodomys_ordii
ENSJJAG00000010667	Rtcb	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSJJAG00000010667	Rtcb	100	91.683	ENSETEG00000001988	RTCB	100	91.683	Echinops_telfairi
ENSJJAG00000010667	Rtcb	100	85.347	ENSEBUG00000014235	rtcb	100	85.347	Eptatretus_burgeri
ENSJJAG00000010667	Rtcb	100	99.208	ENSEASG00005019059	RTCB	100	99.208	Equus_asinus_asinus
ENSJJAG00000010667	Rtcb	100	99.208	ENSECAG00000023998	RTCB	100	99.208	Equus_caballus
ENSJJAG00000010667	Rtcb	89	89.485	ENSEEUG00000006251	RTCB	100	89.485	Erinaceus_europaeus
ENSJJAG00000010667	Rtcb	100	82.987	ENSELUG00000009275	rtcb	100	82.987	Esox_lucius
ENSJJAG00000010667	Rtcb	100	99.010	ENSFCAG00000026480	RTCB	100	99.010	Felis_catus
ENSJJAG00000010667	Rtcb	100	97.426	ENSFALG00000013334	RTCB	100	97.426	Ficedula_albicollis
ENSJJAG00000010667	Rtcb	100	98.812	ENSFDAG00000018150	RTCB	100	98.812	Fukomys_damarensis
ENSJJAG00000010667	Rtcb	100	94.059	ENSFHEG00000009595	rtcb	100	94.059	Fundulus_heteroclitus
ENSJJAG00000010667	Rtcb	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSJJAG00000010667	Rtcb	100	97.228	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSJJAG00000010667	Rtcb	100	94.455	ENSGAFG00000004198	rtcb	100	94.455	Gambusia_affinis
ENSJJAG00000010667	Rtcb	100	94.257	ENSGACG00000000586	rtcb	100	94.257	Gasterosteus_aculeatus
ENSJJAG00000010667	Rtcb	93	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSJJAG00000010667	Rtcb	100	99.010	ENSGGOG00000011402	RTCB	100	99.010	Gorilla_gorilla
ENSJJAG00000010667	Rtcb	100	93.663	ENSHBUG00000020571	rtcb	100	93.663	Haplochromis_burtoni
ENSJJAG00000010667	Rtcb	93	70.127	ENSHGLG00000001066	-	99	70.127	Heterocephalus_glaber_female
ENSJJAG00000010667	Rtcb	100	98.812	ENSHGLG00000004492	RTCB	100	98.812	Heterocephalus_glaber_female
ENSJJAG00000010667	Rtcb	100	98.812	ENSHGLG00100008965	RTCB	100	98.812	Heterocephalus_glaber_male
ENSJJAG00000010667	Rtcb	100	91.716	ENSHCOG00000006450	rtcb	100	91.716	Hippocampus_comes
ENSJJAG00000010667	Rtcb	100	94.851	ENSIPUG00000015443	rtcb	100	94.851	Ictalurus_punctatus
ENSJJAG00000010667	Rtcb	100	98.614	ENSSTOG00000003878	RTCB	100	98.614	Ictidomys_tridecemlineatus
ENSJJAG00000010667	Rtcb	100	93.861	ENSKMAG00000013178	rtcb	100	93.861	Kryptolebias_marmoratus
ENSJJAG00000010667	Rtcb	100	94.257	ENSLBEG00000010566	RTCB	100	94.257	Labrus_bergylta
ENSJJAG00000010667	Rtcb	100	93.267	ENSLBEG00000000214	rtcb	100	93.267	Labrus_bergylta
ENSJJAG00000010667	Rtcb	100	95.446	ENSLACG00000013033	RTCB	100	95.446	Latimeria_chalumnae
ENSJJAG00000010667	Rtcb	100	95.446	ENSLOCG00000016515	rtcb	99	95.446	Lepisosteus_oculatus
ENSJJAG00000010667	Rtcb	100	98.218	ENSLAFG00000002082	RTCB	100	98.218	Loxodonta_africana
ENSJJAG00000010667	Rtcb	100	98.812	ENSMFAG00000034419	RTCB	100	98.812	Macaca_fascicularis
ENSJJAG00000010667	Rtcb	100	98.812	ENSMMUG00000006720	RTCB	100	98.812	Macaca_mulatta
ENSJJAG00000010667	Rtcb	100	98.812	ENSMNEG00000040669	RTCB	100	98.812	Macaca_nemestrina
ENSJJAG00000010667	Rtcb	100	99.010	ENSMLEG00000040505	RTCB	100	99.010	Mandrillus_leucophaeus
ENSJJAG00000010667	Rtcb	100	94.653	ENSMAMG00000020676	rtcb	100	94.653	Mastacembelus_armatus
ENSJJAG00000010667	Rtcb	100	93.663	ENSMZEG00005018942	rtcb	100	93.663	Maylandia_zebra
ENSJJAG00000010667	Rtcb	100	96.844	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSJJAG00000010667	Rtcb	60	99.468	ENSMAUG00000008301	Rtcb	100	99.468	Mesocricetus_auratus
ENSJJAG00000010667	Rtcb	100	79.406	ENSMICG00000036677	-	100	79.406	Microcebus_murinus
ENSJJAG00000010667	Rtcb	100	98.812	ENSMICG00000013303	-	100	98.812	Microcebus_murinus
ENSJJAG00000010667	Rtcb	100	99.208	ENSMOCG00000002440	Rtcb	100	99.208	Microtus_ochrogaster
ENSJJAG00000010667	Rtcb	100	94.851	ENSMMOG00000005987	rtcb	100	94.851	Mola_mola
ENSJJAG00000010667	Rtcb	100	98.020	ENSMODG00000001414	RTCB	100	98.020	Monodelphis_domestica
ENSJJAG00000010667	Rtcb	100	94.455	ENSMALG00000007603	rtcb	100	94.455	Monopterus_albus
ENSJJAG00000010667	Rtcb	100	99.208	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.208	Mus_caroli
ENSJJAG00000010667	Rtcb	100	99.208	ENSMUSG00000001783	Rtcb	100	99.208	Mus_musculus
ENSJJAG00000010667	Rtcb	100	99.208	MGP_PahariEiJ_G0031396	Rtcb	100	99.208	Mus_pahari
ENSJJAG00000010667	Rtcb	100	99.208	MGP_SPRETEiJ_G0016507	Rtcb	100	99.208	Mus_spretus
ENSJJAG00000010667	Rtcb	100	98.812	ENSMPUG00000012285	RTCB	100	98.812	Mustela_putorius_furo
ENSJJAG00000010667	Rtcb	100	96.055	ENSMLUG00000007803	RTCB	100	96.055	Myotis_lucifugus
ENSJJAG00000010667	Rtcb	75	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSJJAG00000010667	Rtcb	100	93.663	ENSNBRG00000017202	rtcb	100	93.663	Neolamprologus_brichardi
ENSJJAG00000010667	Rtcb	100	99.010	ENSNLEG00000004960	RTCB	100	99.010	Nomascus_leucogenys
ENSJJAG00000010667	Rtcb	100	72.673	ENSMEUG00000007809	-	100	72.673	Notamacropus_eugenii
ENSJJAG00000010667	Rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSJJAG00000010667	Rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSJJAG00000010667	Rtcb	100	64.950	ENSODEG00000005042	-	100	64.950	Octodon_degus
ENSJJAG00000010667	Rtcb	100	94.455	ENSONIG00000007474	rtcb	100	94.455	Oreochromis_niloticus
ENSJJAG00000010667	Rtcb	100	98.020	ENSOANG00000005524	RTCB	100	98.020	Ornithorhynchus_anatinus
ENSJJAG00000010667	Rtcb	93	99.149	ENSOCUG00000008270	RTCB	96	99.149	Oryctolagus_cuniculus
ENSJJAG00000010667	Rtcb	100	93.861	ENSORLG00000020093	rtcb	100	93.861	Oryzias_latipes
ENSJJAG00000010667	Rtcb	100	93.861	ENSORLG00020003706	rtcb	100	93.861	Oryzias_latipes_hni
ENSJJAG00000010667	Rtcb	100	94.059	ENSORLG00015002968	rtcb	100	94.059	Oryzias_latipes_hsok
ENSJJAG00000010667	Rtcb	100	93.663	ENSOMEG00000021278	rtcb	100	93.663	Oryzias_melastigma
ENSJJAG00000010667	Rtcb	100	98.218	ENSOGAG00000001425	RTCB	100	98.218	Otolemur_garnettii
ENSJJAG00000010667	Rtcb	100	98.812	ENSOARG00000018008	RTCB	100	98.812	Ovis_aries
ENSJJAG00000010667	Rtcb	100	99.010	ENSPPAG00000028667	RTCB	100	99.010	Pan_paniscus
ENSJJAG00000010667	Rtcb	100	99.010	ENSPPRG00000004038	RTCB	100	99.010	Panthera_pardus
ENSJJAG00000010667	Rtcb	94	95.789	ENSPTIG00000020499	RTCB	97	95.789	Panthera_tigris_altaica
ENSJJAG00000010667	Rtcb	100	99.010	ENSPTRG00000014287	RTCB	100	99.010	Pan_troglodytes
ENSJJAG00000010667	Rtcb	100	98.812	ENSPANG00000016035	RTCB	100	98.812	Papio_anubis
ENSJJAG00000010667	Rtcb	100	93.267	ENSPKIG00000001881	rtcb	100	93.267	Paramormyrops_kingsleyae
ENSJJAG00000010667	Rtcb	91	97.609	ENSPSIG00000011690	RTCB	100	97.609	Pelodiscus_sinensis
ENSJJAG00000010667	Rtcb	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSJJAG00000010667	Rtcb	100	99.208	ENSPEMG00000019548	Rtcb	100	99.208	Peromyscus_maniculatus_bairdii
ENSJJAG00000010667	Rtcb	100	91.089	ENSPMAG00000005657	rtcb	100	91.089	Petromyzon_marinus
ENSJJAG00000010667	Rtcb	100	98.416	ENSPCIG00000009467	RTCB	100	98.416	Phascolarctos_cinereus
ENSJJAG00000010667	Rtcb	100	94.851	ENSPFOG00000003058	rtcb	100	94.851	Poecilia_formosa
ENSJJAG00000010667	Rtcb	100	94.653	ENSPLAG00000017663	rtcb	100	94.653	Poecilia_latipinna
ENSJJAG00000010667	Rtcb	100	94.851	ENSPMEG00000006227	rtcb	100	94.851	Poecilia_mexicana
ENSJJAG00000010667	Rtcb	100	94.455	ENSPREG00000018467	rtcb	100	94.455	Poecilia_reticulata
ENSJJAG00000010667	Rtcb	100	99.010	ENSPPYG00000011752	RTCB	100	99.010	Pongo_abelii
ENSJJAG00000010667	Rtcb	93	81.144	ENSPCAG00000013641	RTCB	100	81.144	Procavia_capensis
ENSJJAG00000010667	Rtcb	100	99.010	ENSPCOG00000017243	RTCB	100	99.010	Propithecus_coquereli
ENSJJAG00000010667	Rtcb	93	98.511	ENSPVAG00000002380	RTCB	100	98.511	Pteropus_vampyrus
ENSJJAG00000010667	Rtcb	100	93.663	ENSPNYG00000022760	rtcb	100	93.663	Pundamilia_nyererei
ENSJJAG00000010667	Rtcb	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
ENSJJAG00000010667	Rtcb	100	99.208	ENSRNOG00000004813	Rtcb	100	99.208	Rattus_norvegicus
ENSJJAG00000010667	Rtcb	100	90.119	ENSRBIG00000042090	RTCB	100	90.119	Rhinopithecus_bieti
ENSJJAG00000010667	Rtcb	100	94.059	ENSSBOG00000020085	-	100	94.059	Saimiri_boliviensis_boliviensis
ENSJJAG00000010667	Rtcb	94	98.945	ENSSHAG00000016277	RTCB	100	98.945	Sarcophilus_harrisii
ENSJJAG00000010667	Rtcb	100	94.059	ENSSFOG00015011572	RTCB	100	94.059	Scleropages_formosus
ENSJJAG00000010667	Rtcb	100	93.069	ENSSFOG00015000763	rtcb	100	93.069	Scleropages_formosus
ENSJJAG00000010667	Rtcb	100	90.495	ENSSMAG00000005096	rtcb	100	90.495	Scophthalmus_maximus
ENSJJAG00000010667	Rtcb	100	93.861	ENSSDUG00000012605	rtcb	100	93.861	Seriola_dumerili
ENSJJAG00000010667	Rtcb	100	94.059	ENSSLDG00000019458	rtcb	100	94.059	Seriola_lalandi_dorsalis
ENSJJAG00000010667	Rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSJJAG00000010667	Rtcb	100	95.842	ENSSPUG00000012814	RTCB	100	95.842	Sphenodon_punctatus
ENSJJAG00000010667	Rtcb	100	95.050	ENSSPAG00000004623	rtcb	100	95.050	Stegastes_partitus
ENSJJAG00000010667	Rtcb	100	99.010	ENSSSCG00000000158	RTCB	100	99.010	Sus_scrofa
ENSJJAG00000010667	Rtcb	100	97.426	ENSTGUG00000010947	RTCB	99	97.426	Taeniopygia_guttata
ENSJJAG00000010667	Rtcb	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSJJAG00000010667	Rtcb	100	93.861	ENSTNIG00000002484	rtcb	100	93.861	Tetraodon_nigroviridis
ENSJJAG00000010667	Rtcb	100	85.545	ENSTBEG00000004418	RTCB	100	85.545	Tupaia_belangeri
ENSJJAG00000010667	Rtcb	93	98.085	ENSTTRG00000006417	RTCB	100	98.085	Tursiops_truncatus
ENSJJAG00000010667	Rtcb	100	98.812	ENSUAMG00000022792	RTCB	100	98.812	Ursus_americanus
ENSJJAG00000010667	Rtcb	100	98.812	ENSUMAG00000017225	RTCB	100	98.812	Ursus_maritimus
ENSJJAG00000010667	Rtcb	100	98.812	ENSVPAG00000005375	RTCB	100	98.812	Vicugna_pacos
ENSJJAG00000010667	Rtcb	100	98.812	ENSVVUG00000023408	RTCB	100	99.017	Vulpes_vulpes
ENSJJAG00000010667	Rtcb	100	94.455	ENSXETG00000011523	rtcb	100	94.455	Xenopus_tropicalis
ENSJJAG00000010667	Rtcb	100	94.455	ENSXMAG00000002855	rtcb	100	94.455	Xiphophorus_maculatus