EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000010903 (Gene tree)
Gene ID: 101602575
Gene Symbol: Sf3b1
Alias: 2810001M05Rik|Prp10|SAP155|SF3b155|Targ4
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 43920 bases
Position: chrJH725448.1:18614859-18658778
Accession: 101602575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000006213	SF3b1	PF08920.10	3.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000012603	-	3885	XM_004653610	ENSJJAP00000006213	1294 (aa)	XP_004653667	-

Gene Model

Click here to download ENSJJAG00000010903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000010903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000010903	Sf3b1	99	99.922	ENSG00000115524	SF3B1	99	99.922	Homo_sapiens
ENSJJAG00000010903	Sf3b1	99	93.692	ENSAPOG00000011894	sf3b1	99	93.553	Acanthochromis_polyacanthus
ENSJJAG00000010903	Sf3b1	99	99.845	ENSAMEG00000013809	SF3B1	99	99.845	Ailuropoda_melanoleuca
ENSJJAG00000010903	Sf3b1	99	93.143	ENSACIG00000020910	sf3b1	96	92.989	Amphilophus_citrinellus
ENSJJAG00000010903	Sf3b1	99	93.553	ENSAOCG00000004478	sf3b1	99	93.553	Amphiprion_ocellaris
ENSJJAG00000010903	Sf3b1	99	93.553	ENSAPEG00000012937	sf3b1	99	93.553	Amphiprion_percula
ENSJJAG00000010903	Sf3b1	99	93.687	ENSATEG00000020435	sf3b1	99	93.687	Anabas_testudineus
ENSJJAG00000010903	Sf3b1	99	99.302	ENSAPLG00000003993	SF3B1	99	99.302	Anas_platyrhynchos
ENSJJAG00000010903	Sf3b1	99	98.837	ENSACAG00000009612	SF3B1	99	98.837	Anolis_carolinensis
ENSJJAG00000010903	Sf3b1	99	99.922	ENSANAG00000021577	SF3B1	100	99.914	Aotus_nancymaae
ENSJJAG00000010903	Sf3b1	99	92.780	ENSACLG00000023470	sf3b1	99	92.627	Astatotilapia_calliptera
ENSJJAG00000010903	Sf3b1	99	94.086	ENSAMXG00000002219	sf3b1	99	93.932	Astyanax_mexicanus
ENSJJAG00000010903	Sf3b1	99	99.845	ENSBTAG00000008915	SF3B1	99	99.845	Bos_taurus
ENSJJAG00000010903	Sf3b1	99	66.440	WBGene00011605	sftb-1	98	66.516	Caenorhabditis_elegans
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCJAG00000003902	SF3B1	99	99.922	Callithrix_jacchus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCAFG00000010826	SF3B1	99	99.922	Canis_familiaris
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCAFG00020004750	SF3B1	99	99.922	Canis_lupus_dingo
ENSJJAG00000010903	Sf3b1	99	99.845	ENSCHIG00000015226	SF3B1	100	99.768	Capra_hircus
ENSJJAG00000010903	Sf3b1	99	99.845	ENSTSYG00000009214	SF3B1	99	99.845	Carlito_syrichta
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCAPG00000006547	SF3B1	99	99.922	Cavia_aperea
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCPOG00000009353	SF3B1	99	99.922	Cavia_porcellus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCCAG00000020506	SF3B1	99	99.922	Cebus_capucinus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCATG00000035735	SF3B1	99	99.922	Cercocebus_atys
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCLAG00000014767	SF3B1	99	99.922	Chinchilla_lanigera
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCSAG00000011505	SF3B1	99	99.922	Chlorocebus_sabaeus
ENSJJAG00000010903	Sf3b1	76	98.039	ENSCHOG00000009860	SF3B1	75	98.000	Choloepus_hoffmanni
ENSJJAG00000010903	Sf3b1	99	99.147	ENSCPBG00000021902	SF3B1	99	99.321	Chrysemys_picta_bellii
ENSJJAG00000010903	Sf3b1	69	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSJJAG00000010903	Sf3b1	99	80.290	ENSCSAVG00000002559	-	99	79.893	Ciona_savignyi
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCANG00000029415	SF3B1	99	99.922	Colobus_angolensis_palliatus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCGRG00001016990	Sf3b1	99	99.922	Cricetulus_griseus_chok1gshd
ENSJJAG00000010903	Sf3b1	99	99.922	ENSCGRG00000005301	Sf3b1	99	99.922	Cricetulus_griseus_crigri
ENSJJAG00000010903	Sf3b1	99	89.985	ENSCSEG00000003860	sf3b1	99	89.908	Cynoglossus_semilaevis
ENSJJAG00000010903	Sf3b1	96	93.605	ENSCVAG00000003680	sf3b1	99	93.605	Cyprinodon_variegatus
ENSJJAG00000010903	Sf3b1	99	93.630	ENSDARG00000056138	sf3b1	99	93.553	Danio_rerio
ENSJJAG00000010903	Sf3b1	99	99.845	ENSDNOG00000011754	SF3B1	99	99.845	Dasypus_novemcinctus
ENSJJAG00000010903	Sf3b1	99	97.209	ENSDORG00000002399	Sf3b1	99	97.209	Dipodomys_ordii
ENSJJAG00000010903	Sf3b1	99	76.672	FBgn0031266	Sf3b1	99	76.672	Drosophila_melanogaster
ENSJJAG00000010903	Sf3b1	83	99.348	ENSETEG00000009188	SF3B1	99	99.348	Echinops_telfairi
ENSJJAG00000010903	Sf3b1	99	87.298	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSJJAG00000010903	Sf3b1	99	99.845	ENSEASG00005020159	SF3B1	96	99.845	Equus_asinus_asinus
ENSJJAG00000010903	Sf3b1	99	99.845	ENSECAG00000021657	SF3B1	96	99.845	Equus_caballus
ENSJJAG00000010903	Sf3b1	86	100.000	ENSEEUG00000000836	SF3B1	80	100.000	Erinaceus_europaeus
ENSJJAG00000010903	Sf3b1	99	93.059	ENSELUG00000005977	sf3b1	97	92.906	Esox_lucius
ENSJJAG00000010903	Sf3b1	99	99.922	ENSFCAG00000005038	SF3B1	99	99.922	Felis_catus
ENSJJAG00000010903	Sf3b1	99	99.380	ENSFALG00000004281	SF3B1	99	99.380	Ficedula_albicollis
ENSJJAG00000010903	Sf3b1	99	99.922	ENSFDAG00000017510	SF3B1	99	99.922	Fukomys_damarensis
ENSJJAG00000010903	Sf3b1	99	92.863	ENSFHEG00000014333	sf3b1	99	92.863	Fundulus_heteroclitus
ENSJJAG00000010903	Sf3b1	99	93.462	ENSGMOG00000006773	sf3b1	99	93.462	Gadus_morhua
ENSJJAG00000010903	Sf3b1	99	99.302	ENSGALG00000008038	SF3B1	99	99.302	Gallus_gallus
ENSJJAG00000010903	Sf3b1	99	93.441	ENSGAFG00000000704	sf3b1	99	93.441	Gambusia_affinis
ENSJJAG00000010903	Sf3b1	99	93.606	ENSGACG00000008839	sf3b1	99	93.606	Gasterosteus_aculeatus
ENSJJAG00000010903	Sf3b1	99	99.147	ENSGAGG00000017478	SF3B1	98	99.147	Gopherus_agassizii
ENSJJAG00000010903	Sf3b1	99	93.066	ENSGGOG00000009264	SF3B1	99	94.131	Gorilla_gorilla
ENSJJAG00000010903	Sf3b1	99	92.846	ENSHBUG00000007705	sf3b1	99	92.692	Haplochromis_burtoni
ENSJJAG00000010903	Sf3b1	99	99.922	ENSHGLG00000008285	-	99	99.922	Heterocephalus_glaber_female
ENSJJAG00000010903	Sf3b1	99	97.907	ENSHGLG00100005535	-	99	97.907	Heterocephalus_glaber_male
ENSJJAG00000010903	Sf3b1	99	92.977	ENSHCOG00000016775	sf3b1	99	92.824	Hippocampus_comes
ENSJJAG00000010903	Sf3b1	99	93.932	ENSIPUG00000013171	sf3b1	99	93.932	Ictalurus_punctatus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSSTOG00000011034	SF3B1	99	99.922	Ictidomys_tridecemlineatus
ENSJJAG00000010903	Sf3b1	99	93.032	ENSKMAG00000004009	sf3b1	99	92.956	Kryptolebias_marmoratus
ENSJJAG00000010903	Sf3b1	99	93.519	ENSLBEG00000022208	sf3b1	99	93.364	Labrus_bergylta
ENSJJAG00000010903	Sf3b1	99	92.390	ENSLACG00000014832	SF3B1	99	92.390	Latimeria_chalumnae
ENSJJAG00000010903	Sf3b1	99	94.785	ENSLOCG00000003899	sf3b1	99	94.632	Lepisosteus_oculatus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSLAFG00000001956	SF3B1	99	99.922	Loxodonta_africana
ENSJJAG00000010903	Sf3b1	99	99.922	ENSMMUG00000022430	SF3B1	98	99.922	Macaca_mulatta
ENSJJAG00000010903	Sf3b1	99	99.922	ENSMNEG00000042333	SF3B1	100	99.914	Macaca_nemestrina
ENSJJAG00000010903	Sf3b1	96	93.398	ENSMLEG00000026141	SF3B1	99	93.947	Mandrillus_leucophaeus
ENSJJAG00000010903	Sf3b1	99	93.548	ENSMAMG00000010241	sf3b1	99	93.548	Mastacembelus_armatus
ENSJJAG00000010903	Sf3b1	99	92.780	ENSMZEG00005021254	sf3b1	99	92.627	Maylandia_zebra
ENSJJAG00000010903	Sf3b1	99	98.682	ENSMGAG00000007017	SF3B1	99	98.682	Meleagris_gallopavo
ENSJJAG00000010903	Sf3b1	99	95.659	ENSMAUG00000009071	Sf3b1	98	95.659	Mesocricetus_auratus
ENSJJAG00000010903	Sf3b1	99	99.845	ENSMICG00000013879	SF3B1	99	99.845	Microcebus_murinus
ENSJJAG00000010903	Sf3b1	99	95.504	ENSMOCG00000000455	Sf3b1	99	95.504	Microtus_ochrogaster
ENSJJAG00000010903	Sf3b1	83	93.062	ENSMMOG00000000475	sf3b1	99	93.062	Mola_mola
ENSJJAG00000010903	Sf3b1	99	99.225	ENSMODG00000012275	SF3B1	99	99.225	Monodelphis_domestica
ENSJJAG00000010903	Sf3b1	99	93.472	ENSMALG00000017211	sf3b1	99	93.472	Monopterus_albus
ENSJJAG00000010903	Sf3b1	99	99.922	MGP_CAROLIEiJ_G0014141	Sf3b1	99	99.922	Mus_caroli
ENSJJAG00000010903	Sf3b1	99	99.922	ENSMUSG00000025982	Sf3b1	99	99.922	Mus_musculus
ENSJJAG00000010903	Sf3b1	99	99.922	MGP_SPRETEiJ_G0014947	Sf3b1	99	99.922	Mus_spretus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSMPUG00000007799	SF3B1	99	99.922	Mustela_putorius_furo
ENSJJAG00000010903	Sf3b1	99	98.682	ENSMLUG00000000840	SF3B1	99	98.682	Myotis_lucifugus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSNGAG00000021884	-	99	99.922	Nannospalax_galili
ENSJJAG00000010903	Sf3b1	99	88.992	ENSNBRG00000015816	sf3b1	99	88.992	Neolamprologus_brichardi
ENSJJAG00000010903	Sf3b1	99	99.922	ENSNLEG00000006861	SF3B1	99	99.922	Nomascus_leucogenys
ENSJJAG00000010903	Sf3b1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSJJAG00000010903	Sf3b1	99	87.907	ENSOPRG00000008596	SF3B1	99	87.907	Ochotona_princeps
ENSJJAG00000010903	Sf3b1	99	99.922	ENSODEG00000011153	-	99	99.922	Octodon_degus
ENSJJAG00000010903	Sf3b1	99	92.780	ENSONIG00000013758	sf3b1	99	92.627	Oreochromis_niloticus
ENSJJAG00000010903	Sf3b1	84	98.893	ENSOCUG00000012722	-	96	98.893	Oryctolagus_cuniculus
ENSJJAG00000010903	Sf3b1	99	93.318	ENSORLG00000020219	sf3b1	99	93.318	Oryzias_latipes
ENSJJAG00000010903	Sf3b1	99	93.318	ENSORLG00020001746	sf3b1	99	93.318	Oryzias_latipes_hni
ENSJJAG00000010903	Sf3b1	63	90.799	ENSORLG00015001759	sf3b1	96	90.799	Oryzias_latipes_hsok
ENSJJAG00000010903	Sf3b1	99	93.323	ENSOMEG00000019231	sf3b1	99	93.323	Oryzias_melastigma
ENSJJAG00000010903	Sf3b1	99	99.845	ENSOARG00000015374	SF3B1	99	99.845	Ovis_aries
ENSJJAG00000010903	Sf3b1	99	99.922	ENSPPAG00000035007	SF3B1	99	99.922	Pan_paniscus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSPPRG00000009090	SF3B1	99	99.922	Panthera_pardus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSPTIG00000021557	SF3B1	99	99.922	Panthera_tigris_altaica
ENSJJAG00000010903	Sf3b1	99	91.345	ENSPTRG00000012771	SF3B1	99	91.345	Pan_troglodytes
ENSJJAG00000010903	Sf3b1	99	99.922	ENSPANG00000013417	SF3B1	99	99.922	Papio_anubis
ENSJJAG00000010903	Sf3b1	99	95.000	ENSPKIG00000000784	sf3b1	99	94.846	Paramormyrops_kingsleyae
ENSJJAG00000010903	Sf3b1	99	97.907	ENSPSIG00000017222	SF3B1	98	97.907	Pelodiscus_sinensis
ENSJJAG00000010903	Sf3b1	90	93.947	ENSPMGG00000004330	sf3b1	98	93.777	Periophthalmus_magnuspinnatus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSPEMG00000010699	Sf3b1	99	99.922	Peromyscus_maniculatus_bairdii
ENSJJAG00000010903	Sf3b1	99	90.177	ENSPMAG00000001311	sf3b1	99	90.330	Petromyzon_marinus
ENSJJAG00000010903	Sf3b1	99	99.147	ENSPCIG00000010642	SF3B1	99	99.147	Phascolarctos_cinereus
ENSJJAG00000010903	Sf3b1	99	93.252	ENSPFOG00000000073	sf3b1	99	93.252	Poecilia_formosa
ENSJJAG00000010903	Sf3b1	99	93.323	ENSPLAG00000002293	sf3b1	99	93.323	Poecilia_latipinna
ENSJJAG00000010903	Sf3b1	99	93.323	ENSPMEG00000000446	sf3b1	97	93.323	Poecilia_mexicana
ENSJJAG00000010903	Sf3b1	99	93.400	ENSPREG00000019652	sf3b1	99	93.400	Poecilia_reticulata
ENSJJAG00000010903	Sf3b1	99	98.723	ENSPPYG00000013044	SF3B1	96	98.723	Pongo_abelii
ENSJJAG00000010903	Sf3b1	99	99.767	ENSPCAG00000009292	SF3B1	99	99.767	Procavia_capensis
ENSJJAG00000010903	Sf3b1	99	99.845	ENSPCOG00000024074	SF3B1	99	99.845	Propithecus_coquereli
ENSJJAG00000010903	Sf3b1	99	99.922	ENSPVAG00000008302	SF3B1	99	99.922	Pteropus_vampyrus
ENSJJAG00000010903	Sf3b1	99	92.780	ENSPNYG00000014939	sf3b1	99	92.627	Pundamilia_nyererei
ENSJJAG00000010903	Sf3b1	99	93.932	ENSPNAG00000008288	sf3b1	99	93.932	Pygocentrus_nattereri
ENSJJAG00000010903	Sf3b1	99	99.922	ENSRNOG00000013516	Sf3b1	99	99.922	Rattus_norvegicus
ENSJJAG00000010903	Sf3b1	99	96.357	ENSRBIG00000026096	SF3B1	99	96.357	Rhinopithecus_bieti
ENSJJAG00000010903	Sf3b1	99	99.922	ENSRROG00000031308	SF3B1	99	99.922	Rhinopithecus_roxellana
ENSJJAG00000010903	Sf3b1	99	99.922	ENSSBOG00000020080	SF3B1	99	99.922	Saimiri_boliviensis_boliviensis
ENSJJAG00000010903	Sf3b1	99	99.225	ENSSHAG00000017564	SF3B1	99	99.225	Sarcophilus_harrisii
ENSJJAG00000010903	Sf3b1	99	94.628	ENSSFOG00015021535	sf3b1	99	94.781	Scleropages_formosus
ENSJJAG00000010903	Sf3b1	99	92.879	ENSSMAG00000013977	sf3b1	98	92.726	Scophthalmus_maximus
ENSJJAG00000010903	Sf3b1	99	93.318	ENSSDUG00000017422	sf3b1	99	93.318	Seriola_dumerili
ENSJJAG00000010903	Sf3b1	99	93.241	ENSSLDG00000019495	sf3b1	99	93.241	Seriola_lalandi_dorsalis
ENSJJAG00000010903	Sf3b1	77	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSJJAG00000010903	Sf3b1	99	98.992	ENSSPUG00000000410	SF3B1	99	98.992	Sphenodon_punctatus
ENSJJAG00000010903	Sf3b1	99	93.625	ENSSPAG00000010451	sf3b1	98	93.625	Stegastes_partitus
ENSJJAG00000010903	Sf3b1	91	99.574	ENSSSCG00000016075	SF3B1	100	99.914	Sus_scrofa
ENSJJAG00000010903	Sf3b1	99	99.225	ENSTGUG00000010553	SF3B1	99	99.225	Taeniopygia_guttata
ENSJJAG00000010903	Sf3b1	99	93.395	ENSTRUG00000015534	sf3b1	99	93.241	Takifugu_rubripes
ENSJJAG00000010903	Sf3b1	87	100.000	ENSTBEG00000008714	SF3B1	92	100.000	Tupaia_belangeri
ENSJJAG00000010903	Sf3b1	92	94.058	ENSTTRG00000003414	SF3B1	91	94.058	Tursiops_truncatus
ENSJJAG00000010903	Sf3b1	94	95.652	ENSUAMG00000018506	SF3B1	99	98.988	Ursus_americanus
ENSJJAG00000010903	Sf3b1	99	99.922	ENSUMAG00000020945	SF3B1	99	99.922	Ursus_maritimus
ENSJJAG00000010903	Sf3b1	99	91.705	ENSVPAG00000005798	SF3B1	99	91.705	Vicugna_pacos
ENSJJAG00000010903	Sf3b1	99	99.922	ENSVVUG00000025948	SF3B1	94	99.922	Vulpes_vulpes
ENSJJAG00000010903	Sf3b1	99	96.667	ENSXETG00000013339	sf3b1	99	96.667	Xenopus_tropicalis
ENSJJAG00000010903	Sf3b1	99	89.799	ENSXCOG00000018086	sf3b1	99	89.684	Xiphophorus_couchianus
ENSJJAG00000010903	Sf3b1	99	93.323	ENSXMAG00000007369	sf3b1	99	93.624	Xiphophorus_maculatus