EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000011371 (Gene tree)
Gene ID: 101605101
Gene Symbol: Hnrnpu
Alias: Hnrpu|Sp120|scaffold attachment factor A
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 9834 bases
Position: chrJH725447.1:11251828-11261661
Accession: 101605101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000006831	SAP	PF02037.27	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000013228	-	2457	XM_004653266	ENSJJAP00000006831	818 (aa)	XP_004653323	-

Gene Model

Click here to download ENSJJAG00000011371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000011371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000011371	Hnrnpu	53	59.318	ENSJJAG00000011986	Hnrnpul1	61	52.273
ENSJJAG00000011371	Hnrnpu	62	48.669	ENSJJAG00000011206	Hnrnpul2	66	50.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000011371	Hnrnpu	100	96.614	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSJJAG00000011371	Hnrnpu	79	83.721	ENSAPOG00000017400	hnrnpub	86	83.721	Acanthochromis_polyacanthus
ENSJJAG00000011371	Hnrnpu	100	92.271	ENSAMEG00000009145	HNRNPU	100	92.150	Ailuropoda_melanoleuca
ENSJJAG00000011371	Hnrnpu	81	60.033	ENSACIG00000012138	hnrnpub	88	80.851	Amphilophus_citrinellus
ENSJJAG00000011371	Hnrnpu	79	86.047	ENSAOCG00000015843	hnrnpub	86	86.047	Amphiprion_ocellaris
ENSJJAG00000011371	Hnrnpu	79	86.047	ENSAPEG00000014679	hnrnpub	86	86.047	Amphiprion_percula
ENSJJAG00000011371	Hnrnpu	79	85.736	ENSACAG00000004511	HNRNPU	72	90.017	Anolis_carolinensis
ENSJJAG00000011371	Hnrnpu	100	94.317	ENSANAG00000033895	-	99	98.872	Aotus_nancymaae
ENSJJAG00000011371	Hnrnpu	79	78.723	ENSACLG00000008165	hnrnpub	86	78.723	Astatotilapia_calliptera
ENSJJAG00000011371	Hnrnpu	100	96.372	ENSBTAG00000007606	HNRNPU	100	96.372	Bos_taurus
ENSJJAG00000011371	Hnrnpu	100	96.252	ENSCJAG00000016914	HNRNPU	99	98.684	Callithrix_jacchus
ENSJJAG00000011371	Hnrnpu	100	94.196	ENSCAFG00020000918	HNRNPU	100	94.196	Canis_lupus_dingo
ENSJJAG00000011371	Hnrnpu	100	94.196	ENSCHIG00000004900	HNRNPU	100	94.196	Capra_hircus
ENSJJAG00000011371	Hnrnpu	100	96.602	ENSCPOG00000011887	HNRNPU	100	96.602	Cavia_porcellus
ENSJJAG00000011371	Hnrnpu	100	96.252	ENSCCAG00000037859	-	99	98.684	Cebus_capucinus
ENSJJAG00000011371	Hnrnpu	100	96.372	ENSCATG00000035273	HNRNPU	100	96.372	Cercocebus_atys
ENSJJAG00000011371	Hnrnpu	100	96.845	ENSCLAG00000007100	HNRNPU	100	96.845	Chinchilla_lanigera
ENSJJAG00000011371	Hnrnpu	100	94.196	ENSCSAG00000009219	HNRNPU	100	94.196	Chlorocebus_sabaeus
ENSJJAG00000011371	Hnrnpu	79	93.333	ENSCHOG00000001387	HNRNPU	79	93.333	Choloepus_hoffmanni
ENSJJAG00000011371	Hnrnpu	100	79.905	ENSCPBG00000009415	HNRNPU	98	81.000	Chrysemys_picta_bellii
ENSJJAG00000011371	Hnrnpu	100	92.503	ENSCANG00000022780	HNRNPU	100	91.294	Colobus_angolensis_palliatus
ENSJJAG00000011371	Hnrnpu	100	95.366	ENSCGRG00001020525	Hnrnpu	100	94.512	Cricetulus_griseus_chok1gshd
ENSJJAG00000011371	Hnrnpu	79	83.721	ENSCSEG00000010804	hnrnpub	96	62.635	Cynoglossus_semilaevis
ENSJJAG00000011371	Hnrnpu	80	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSJJAG00000011371	Hnrnpu	79	65.672	ENSDARG00000015206	hnrnpua	87	83.721	Danio_rerio
ENSJJAG00000011371	Hnrnpu	81	61.256	ENSDARG00000004735	hnrnpub	86	81.395	Danio_rerio
ENSJJAG00000011371	Hnrnpu	82	95.208	ENSDNOG00000000215	HNRNPU	88	99.158	Dasypus_novemcinctus
ENSJJAG00000011371	Hnrnpu	100	90.134	ENSDORG00000015491	Hnrnpu	100	90.743	Dipodomys_ordii
ENSJJAG00000011371	Hnrnpu	72	98.148	ENSETEG00000014565	HNRNPU	100	85.646	Echinops_telfairi
ENSJJAG00000011371	Hnrnpu	100	93.591	ENSEASG00005003017	HNRNPU	100	93.591	Equus_asinus_asinus
ENSJJAG00000011371	Hnrnpu	100	93.470	ENSECAG00000007955	HNRNPU	100	93.470	Equus_caballus
ENSJJAG00000011371	Hnrnpu	83	61.842	ENSELUG00000010733	hnrnpub	85	86.047	Esox_lucius
ENSJJAG00000011371	Hnrnpu	99	50.483	ENSELUG00000011966	hnrnpua	64	81.395	Esox_lucius
ENSJJAG00000011371	Hnrnpu	100	94.189	ENSFCAG00000002156	HNRNPU	99	98.308	Felis_catus
ENSJJAG00000011371	Hnrnpu	91	95.645	ENSFDAG00000006026	HNRNPU	99	98.822	Fukomys_damarensis
ENSJJAG00000011371	Hnrnpu	83	60.526	ENSFHEG00000022639	hnrnpub	69	69.643	Fundulus_heteroclitus
ENSJJAG00000011371	Hnrnpu	77	78.000	ENSGMOG00000001755	hnrnpub	77	61.120	Gadus_morhua
ENSJJAG00000011371	Hnrnpu	100	79.245	ENSGALG00000010671	HNRNPU	100	77.817	Gallus_gallus
ENSJJAG00000011371	Hnrnpu	81	63.492	ENSGAFG00000009369	hnrnpub	84	83.721	Gambusia_affinis
ENSJJAG00000011371	Hnrnpu	71	62.046	ENSGACG00000004679	hnrnpub	73	61.628	Gasterosteus_aculeatus
ENSJJAG00000011371	Hnrnpu	100	96.131	ENSGGOG00000004061	HNRNPU	99	99.060	Gorilla_gorilla
ENSJJAG00000011371	Hnrnpu	79	78.723	ENSHBUG00000012290	hnrnpub	86	78.723	Haplochromis_burtoni
ENSJJAG00000011371	Hnrnpu	100	95.042	ENSHGLG00000010594	-	100	95.042	Heterocephalus_glaber_female
ENSJJAG00000011371	Hnrnpu	82	98.182	ENSHGLG00100015093	HNRNPU	100	98.182	Heterocephalus_glaber_male
ENSJJAG00000011371	Hnrnpu	78	83.333	ENSHCOG00000020091	hnrnpub	90	54.141	Hippocampus_comes
ENSJJAG00000011371	Hnrnpu	76	83.721	ENSIPUG00000007749	hnrnpu	92	68.421	Ictalurus_punctatus
ENSJJAG00000011371	Hnrnpu	79	83.721	ENSKMAG00000004532	hnrnpub	99	47.368	Kryptolebias_marmoratus
ENSJJAG00000011371	Hnrnpu	83	59.459	ENSLBEG00000022520	hnrnpub	85	83.721	Labrus_bergylta
ENSJJAG00000011371	Hnrnpu	99	61.427	ENSLACG00000017463	HNRNPU	99	60.843	Latimeria_chalumnae
ENSJJAG00000011371	Hnrnpu	79	86.047	ENSLOCG00000016652	hnrnpua	82	86.047	Lepisosteus_oculatus
ENSJJAG00000011371	Hnrnpu	100	95.647	ENSLAFG00000021377	HNRNPU	100	95.647	Loxodonta_africana
ENSJJAG00000011371	Hnrnpu	100	96.372	ENSMFAG00000037308	HNRNPU	100	96.372	Macaca_fascicularis
ENSJJAG00000011371	Hnrnpu	100	94.526	ENSMMUG00000021098	HNRNPU	100	94.526	Macaca_mulatta
ENSJJAG00000011371	Hnrnpu	100	96.372	ENSMNEG00000043645	HNRNPU	100	96.372	Macaca_nemestrina
ENSJJAG00000011371	Hnrnpu	80	75.000	ENSMAMG00000007196	hnrnpub	86	75.000	Mastacembelus_armatus
ENSJJAG00000011371	Hnrnpu	79	78.723	ENSMZEG00005003185	hnrnpub	86	78.723	Maylandia_zebra
ENSJJAG00000011371	Hnrnpu	100	94.161	ENSMAUG00000008842	Hnrnpu	100	94.153	Mesocricetus_auratus
ENSJJAG00000011371	Hnrnpu	100	96.493	ENSMICG00000004616	HNRNPU	100	96.493	Microcebus_murinus
ENSJJAG00000011371	Hnrnpu	100	94.032	ENSMOCG00000015623	Hnrnpu	100	94.390	Microtus_ochrogaster
ENSJJAG00000011371	Hnrnpu	100	89.072	ENSMODG00000006515	HNRNPU	100	89.906	Monodelphis_domestica
ENSJJAG00000011371	Hnrnpu	76	83.721	ENSMALG00000018243	hnrnpub	75	83.721	Monopterus_albus
ENSJJAG00000011371	Hnrnpu	100	94.282	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	94.282	Mus_caroli
ENSJJAG00000011371	Hnrnpu	100	94.404	ENSMUSG00000039630	Hnrnpu	100	94.404	Mus_musculus
ENSJJAG00000011371	Hnrnpu	100	92.953	MGP_PahariEiJ_G0028193	Hnrnpu	100	93.074	Mus_pahari
ENSJJAG00000011371	Hnrnpu	100	94.404	MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.404	Mus_spretus
ENSJJAG00000011371	Hnrnpu	100	85.509	ENSMLUG00000000475	HNRNPU	100	83.473	Myotis_lucifugus
ENSJJAG00000011371	Hnrnpu	100	95.116	ENSNGAG00000019075	Hnrnpu	100	95.116	Nannospalax_galili
ENSJJAG00000011371	Hnrnpu	79	78.723	ENSNBRG00000017855	hnrnpub	86	78.723	Neolamprologus_brichardi
ENSJJAG00000011371	Hnrnpu	99	86.369	ENSMEUG00000000541	HNRNPU	99	87.286	Notamacropus_eugenii
ENSJJAG00000011371	Hnrnpu	70	99.029	ENSODEG00000014458	-	100	99.029	Octodon_degus
ENSJJAG00000011371	Hnrnpu	79	78.723	ENSONIG00000001260	hnrnpub	89	78.723	Oreochromis_niloticus
ENSJJAG00000011371	Hnrnpu	98	96.420	ENSOCUG00000014469	HNRNPU	93	96.420	Oryctolagus_cuniculus
ENSJJAG00000011371	Hnrnpu	79	83.721	ENSORLG00020005363	hnrnpub	86	83.721	Oryzias_latipes_hni
ENSJJAG00000011371	Hnrnpu	79	83.721	ENSORLG00015001190	hnrnpub	86	83.721	Oryzias_latipes_hsok
ENSJJAG00000011371	Hnrnpu	79	83.721	ENSOMEG00000014951	hnrnpub	86	83.721	Oryzias_melastigma
ENSJJAG00000011371	Hnrnpu	100	94.559	ENSOGAG00000014024	HNRNPU	100	94.559	Otolemur_garnettii
ENSJJAG00000011371	Hnrnpu	81	97.833	ENSOARG00000004985	HNRNPU	89	98.490	Ovis_aries
ENSJJAG00000011371	Hnrnpu	100	96.614	ENSPPAG00000038652	HNRNPU	99	99.060	Pan_paniscus
ENSJJAG00000011371	Hnrnpu	100	96.131	ENSPPRG00000002662	HNRNPU	99	98.308	Panthera_pardus
ENSJJAG00000011371	Hnrnpu	100	96.614	ENSPTRG00000002182	HNRNPU	99	99.060	Pan_troglodytes
ENSJJAG00000011371	Hnrnpu	100	94.282	ENSPANG00000011643	HNRNPU	100	94.282	Papio_anubis
ENSJJAG00000011371	Hnrnpu	79	83.721	ENSPKIG00000006885	hnrnpua	83	83.721	Paramormyrops_kingsleyae
ENSJJAG00000011371	Hnrnpu	85	66.352	ENSPKIG00000022332	hnrnpub	78	67.252	Paramormyrops_kingsleyae
ENSJJAG00000011371	Hnrnpu	100	93.214	ENSPCIG00000008657	HNRNPU	100	93.214	Phascolarctos_cinereus
ENSJJAG00000011371	Hnrnpu	81	65.079	ENSPFOG00000002908	hnrnpub	86	83.721	Poecilia_formosa
ENSJJAG00000011371	Hnrnpu	81	65.079	ENSPLAG00000004160	hnrnpub	87	68.421	Poecilia_latipinna
ENSJJAG00000011371	Hnrnpu	100	89.359	ENSPCOG00000003883	-	100	89.359	Propithecus_coquereli
ENSJJAG00000011371	Hnrnpu	100	96.372	ENSPCOG00000018655	-	100	96.372	Propithecus_coquereli
ENSJJAG00000011371	Hnrnpu	100	96.372	ENSPVAG00000002581	HNRNPU	100	96.372	Pteropus_vampyrus
ENSJJAG00000011371	Hnrnpu	79	78.723	ENSPNYG00000021642	hnrnpub	86	78.723	Pundamilia_nyererei
ENSJJAG00000011371	Hnrnpu	88	64.787	ENSPNAG00000001055	hnrnpub	84	83.721	Pygocentrus_nattereri
ENSJJAG00000011371	Hnrnpu	100	94.390	ENSRNOG00000033790	Hnrnpu	100	94.390	Rattus_norvegicus
ENSJJAG00000011371	Hnrnpu	100	93.552	ENSRBIG00000031519	HNRNPU	100	93.552	Rhinopithecus_bieti
ENSJJAG00000011371	Hnrnpu	100	94.526	ENSRROG00000041642	HNRNPU	100	94.526	Rhinopithecus_roxellana
ENSJJAG00000011371	Hnrnpu	74	66.461	ENSSFOG00015001124	hnrnpub	78	64.264	Scleropages_formosus
ENSJJAG00000011371	Hnrnpu	74	64.947	ENSSFOG00015019004	hnrnpu	77	67.412	Scleropages_formosus
ENSJJAG00000011371	Hnrnpu	77	61.863	ENSSMAG00000003607	hnrnpub	77	55.655	Scophthalmus_maximus
ENSJJAG00000011371	Hnrnpu	83	60.526	ENSSDUG00000005912	hnrnpub	79	56.372	Seriola_dumerili
ENSJJAG00000011371	Hnrnpu	83	60.526	ENSSLDG00000004899	hnrnpub	79	56.222	Seriola_lalandi_dorsalis
ENSJJAG00000011371	Hnrnpu	100	79.042	ENSSPUG00000011393	HNRNPU	100	80.314	Sphenodon_punctatus
ENSJJAG00000011371	Hnrnpu	94	50.448	ENSSPAG00000011853	hnrnpub	80	56.541	Stegastes_partitus
ENSJJAG00000011371	Hnrnpu	100	96.614	ENSSSCG00000010877	HNRNPU	100	96.614	Sus_scrofa
ENSJJAG00000011371	Hnrnpu	79	79.070	ENSTRUG00000007759	hnrnpub	84	79.070	Takifugu_rubripes
ENSJJAG00000011371	Hnrnpu	78	76.744	ENSTNIG00000009725	hnrnpub	90	76.744	Tetraodon_nigroviridis
ENSJJAG00000011371	Hnrnpu	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSJJAG00000011371	Hnrnpu	100	96.372	ENSUAMG00000021120	HNRNPU	99	98.684	Ursus_americanus
ENSJJAG00000011371	Hnrnpu	99	83.333	ENSUMAG00000012322	HNRNPU	98	93.961	Ursus_maritimus
ENSJJAG00000011371	Hnrnpu	78	92.293	ENSVPAG00000010520	HNRNPU	91	92.481	Vicugna_pacos
ENSJJAG00000011371	Hnrnpu	100	94.196	ENSVVUG00000026524	HNRNPU	100	94.196	Vulpes_vulpes
ENSJJAG00000011371	Hnrnpu	99	66.197	ENSXETG00000011386	hnrnpu	99	68.660	Xenopus_tropicalis
ENSJJAG00000011371	Hnrnpu	81	63.492	ENSXMAG00000010356	hnrnpub	85	83.721	Xiphophorus_maculatus