EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000011495 (Gene tree)
Gene ID: 101615477
Gene Symbol: Snrnp48
Alias: 1110050F08Rik|6530403A03Rik
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 22228 bases
Position: chrJH725525.1:2653562-2675789
Accession: 101615477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000006973	zf-U11-48K	PF05253.12	9.3e-09	1	1
ENSJJAP00000006964	zf-U11-48K	PF05253.12	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000013374	-	843	-	ENSJJAP00000006973	280 (aa)	-	-
ENSJJAT00000013365	-	1027	XM_004666153	ENSJJAP00000006964	339 (aa)	XP_004666210	UPI00033335F4

Gene Model

Click here to download ENSJJAG00000011495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000011495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000011495	Snrnp48	100	85.546	ENSG00000168566	SNRNP48	100	85.546	Homo_sapiens
ENSJJAG00000011495	Snrnp48	81	48.227	ENSAPOG00000021430	snrnp48	83	47.917	Acanthochromis_polyacanthus
ENSJJAG00000011495	Snrnp48	99	83.573	ENSAMEG00000017349	SNRNP48	100	83.573	Ailuropoda_melanoleuca
ENSJJAG00000011495	Snrnp48	87	45.515	ENSACIG00000002032	snrnp48	82	45.936	Amphilophus_citrinellus
ENSJJAG00000011495	Snrnp48	81	47.518	ENSAOCG00000010562	snrnp48	79	48.551	Amphiprion_ocellaris
ENSJJAG00000011495	Snrnp48	81	48.214	ENSAPEG00000003231	snrnp48	83	47.902	Amphiprion_percula
ENSJJAG00000011495	Snrnp48	72	52.033	ENSATEG00000020210	snrnp48	82	48.592	Anabas_testudineus
ENSJJAG00000011495	Snrnp48	83	62.329	ENSACAG00000002811	SNRNP48	90	62.329	Anolis_carolinensis
ENSJJAG00000011495	Snrnp48	100	84.956	ENSANAG00000033538	SNRNP48	100	84.956	Aotus_nancymaae
ENSJJAG00000011495	Snrnp48	95	43.902	ENSAMXG00000015309	snrnp48	86	46.075	Astyanax_mexicanus
ENSJJAG00000011495	Snrnp48	100	80.588	ENSBTAG00000001123	SNRNP48	100	81.176	Bos_taurus
ENSJJAG00000011495	Snrnp48	100	85.251	ENSCJAG00000021330	SNRNP48	100	85.251	Callithrix_jacchus
ENSJJAG00000011495	Snrnp48	99	84.776	ENSCAFG00000009574	SNRNP48	84	84.412	Canis_familiaris
ENSJJAG00000011495	Snrnp48	100	84.706	ENSCAFG00020013203	SNRNP48	100	84.706	Canis_lupus_dingo
ENSJJAG00000011495	Snrnp48	100	82.059	ENSCHIG00000015216	SNRNP48	100	82.647	Capra_hircus
ENSJJAG00000011495	Snrnp48	100	83.186	ENSTSYG00000000698	SNRNP48	100	83.186	Carlito_syrichta
ENSJJAG00000011495	Snrnp48	91	79.221	ENSCAPG00000006768	SNRNP48	100	79.221	Cavia_aperea
ENSJJAG00000011495	Snrnp48	100	82.301	ENSCPOG00000007910	SNRNP48	100	82.301	Cavia_porcellus
ENSJJAG00000011495	Snrnp48	100	84.366	ENSCCAG00000035652	SNRNP48	100	84.366	Cebus_capucinus
ENSJJAG00000011495	Snrnp48	100	84.956	ENSCATG00000033947	SNRNP48	100	84.956	Cercocebus_atys
ENSJJAG00000011495	Snrnp48	100	84.661	ENSCLAG00000003765	SNRNP48	100	84.661	Chinchilla_lanigera
ENSJJAG00000011495	Snrnp48	100	85.251	ENSCSAG00000007409	SNRNP48	100	85.251	Chlorocebus_sabaeus
ENSJJAG00000011495	Snrnp48	85	61.921	ENSCPBG00000019146	SNRNP48	92	61.921	Chrysemys_picta_bellii
ENSJJAG00000011495	Snrnp48	100	85.251	ENSCANG00000030017	SNRNP48	100	85.251	Colobus_angolensis_palliatus
ENSJJAG00000011495	Snrnp48	100	86.136	ENSCGRG00001001076	-	100	85.841	Cricetulus_griseus_chok1gshd
ENSJJAG00000011495	Snrnp48	99	68.060	ENSCGRG00001008805	-	95	67.463	Cricetulus_griseus_chok1gshd
ENSJJAG00000011495	Snrnp48	100	86.136	ENSCGRG00000007781	Snrnp48	100	85.841	Cricetulus_griseus_crigri
ENSJJAG00000011495	Snrnp48	74	48.221	ENSCSEG00000000722	snrnp48	70	48.617	Cynoglossus_semilaevis
ENSJJAG00000011495	Snrnp48	89	46.326	ENSCVAG00000019829	snrnp48	67	49.057	Cyprinodon_variegatus
ENSJJAG00000011495	Snrnp48	81	42.907	ENSDARG00000039989	snrnp48	83	42.712	Danio_rerio
ENSJJAG00000011495	Snrnp48	100	82.941	ENSDNOG00000014978	SNRNP48	100	82.941	Dasypus_novemcinctus
ENSJJAG00000011495	Snrnp48	99	82.891	ENSDORG00000015140	Snrnp48	99	82.891	Dipodomys_ordii
ENSJJAG00000011495	Snrnp48	52	36.054	ENSEBUG00000016376	-	64	35.583	Eptatretus_burgeri
ENSJJAG00000011495	Snrnp48	99	85.207	ENSEASG00005012021	SNRNP48	99	85.207	Equus_asinus_asinus
ENSJJAG00000011495	Snrnp48	100	85.546	ENSECAG00000026937	SNRNP48	100	85.546	Equus_caballus
ENSJJAG00000011495	Snrnp48	100	72.277	ENSEEUG00000015437	SNRNP48	99	62.647	Erinaceus_europaeus
ENSJJAG00000011495	Snrnp48	87	46.711	ENSELUG00000009766	snrnp48	78	47.518	Esox_lucius
ENSJJAG00000011495	Snrnp48	100	85.546	ENSFCAG00000018853	SNRNP48	100	85.546	Felis_catus
ENSJJAG00000011495	Snrnp48	83	62.671	ENSFALG00000007797	SNRNP48	93	62.671	Ficedula_albicollis
ENSJJAG00000011495	Snrnp48	99	83.432	ENSFDAG00000009231	SNRNP48	99	83.432	Fukomys_damarensis
ENSJJAG00000011495	Snrnp48	59	55.941	ENSFHEG00000014647	snrnp48	82	51.261	Fundulus_heteroclitus
ENSJJAG00000011495	Snrnp48	74	46.429	ENSGMOG00000018599	-	86	43.310	Gadus_morhua
ENSJJAG00000011495	Snrnp48	78	64.727	ENSGALG00000013005	SNRNP48	85	65.339	Gallus_gallus
ENSJJAG00000011495	Snrnp48	72	50.607	ENSGAFG00000021639	snrnp48	79	48.201	Gambusia_affinis
ENSJJAG00000011495	Snrnp48	72	51.626	ENSGACG00000017756	-	77	49.813	Gasterosteus_aculeatus
ENSJJAG00000011495	Snrnp48	84	62.000	ENSGAGG00000000865	SNRNP48	97	62.000	Gopherus_agassizii
ENSJJAG00000011495	Snrnp48	100	85.841	ENSGGOG00000013220	SNRNP48	100	85.841	Gorilla_gorilla
ENSJJAG00000011495	Snrnp48	76	48.276	ENSHBUG00000017066	snrnp48	83	46.599	Haplochromis_burtoni
ENSJJAG00000011495	Snrnp48	99	84.024	ENSHGLG00000015241	SNRNP48	99	84.024	Heterocephalus_glaber_female
ENSJJAG00000011495	Snrnp48	99	84.024	ENSHGLG00100010027	SNRNP48	99	84.024	Heterocephalus_glaber_male
ENSJJAG00000011495	Snrnp48	71	47.521	ENSHCOG00000014066	snrnp48	81	44.406	Hippocampus_comes
ENSJJAG00000011495	Snrnp48	100	86.726	ENSSTOG00000014635	SNRNP48	100	86.726	Ictidomys_tridecemlineatus
ENSJJAG00000011495	Snrnp48	92	43.770	ENSKMAG00000016514	snrnp48	80	46.619	Kryptolebias_marmoratus
ENSJJAG00000011495	Snrnp48	78	47.368	ENSLBEG00000026249	snrnp48	82	46.341	Labrus_bergylta
ENSJJAG00000011495	Snrnp48	95	53.659	ENSLACG00000003958	SNRNP48	95	53.659	Latimeria_chalumnae
ENSJJAG00000011495	Snrnp48	83	51.020	ENSLOCG00000004187	snrnp48	84	50.847	Lepisosteus_oculatus
ENSJJAG00000011495	Snrnp48	100	81.711	ENSLAFG00000011152	SNRNP48	100	81.711	Loxodonta_africana
ENSJJAG00000011495	Snrnp48	100	85.546	ENSMFAG00000045216	SNRNP48	100	85.546	Macaca_fascicularis
ENSJJAG00000011495	Snrnp48	100	85.546	ENSMMUG00000014785	SNRNP48	100	85.546	Macaca_mulatta
ENSJJAG00000011495	Snrnp48	100	85.546	ENSMNEG00000042269	SNRNP48	100	85.546	Macaca_nemestrina
ENSJJAG00000011495	Snrnp48	100	85.546	ENSMLEG00000034004	SNRNP48	100	85.546	Mandrillus_leucophaeus
ENSJJAG00000011495	Snrnp48	77	46.591	ENSMAMG00000018673	snrnp48	73	46.667	Mastacembelus_armatus
ENSJJAG00000011495	Snrnp48	82	63.574	ENSMGAG00000006037	SNRNP48	99	62.329	Meleagris_gallopavo
ENSJJAG00000011495	Snrnp48	100	86.136	ENSMAUG00000011944	Snrnp48	100	85.841	Mesocricetus_auratus
ENSJJAG00000011495	Snrnp48	100	83.186	ENSMICG00000012497	SNRNP48	100	83.186	Microcebus_murinus
ENSJJAG00000011495	Snrnp48	100	85.841	ENSMOCG00000015555	Snrnp48	100	85.546	Microtus_ochrogaster
ENSJJAG00000011495	Snrnp48	57	51.020	ENSMMOG00000003072	-	62	51.020	Mola_mola
ENSJJAG00000011495	Snrnp48	98	68.023	ENSMODG00000009996	SNRNP48	93	68.023	Monodelphis_domestica
ENSJJAG00000011495	Snrnp48	74	49.213	ENSMALG00000005725	snrnp48	83	46.528	Monopterus_albus
ENSJJAG00000011495	Snrnp48	100	86.431	MGP_CAROLIEiJ_G0018441	Snrnp48	100	86.431	Mus_caroli
ENSJJAG00000011495	Snrnp48	100	85.546	ENSMUSG00000021431	Snrnp48	100	85.546	Mus_musculus
ENSJJAG00000011495	Snrnp48	100	85.841	MGP_PahariEiJ_G0019509	Snrnp48	100	85.841	Mus_pahari
ENSJJAG00000011495	Snrnp48	100	85.251	MGP_SPRETEiJ_G0019321	Snrnp48	100	85.251	Mus_spretus
ENSJJAG00000011495	Snrnp48	99	85.503	ENSNGAG00000004849	Snrnp48	99	85.503	Nannospalax_galili
ENSJJAG00000011495	Snrnp48	76	47.893	ENSNBRG00000012127	snrnp48	84	46.259	Neolamprologus_brichardi
ENSJJAG00000011495	Snrnp48	100	85.841	ENSNLEG00000011667	SNRNP48	100	85.841	Nomascus_leucogenys
ENSJJAG00000011495	Snrnp48	95	75.542	ENSOPRG00000015471	SNRNP48	100	75.232	Ochotona_princeps
ENSJJAG00000011495	Snrnp48	98	43.064	ENSONIG00000001520	snrnp48	96	41.360	Oreochromis_niloticus
ENSJJAG00000011495	Snrnp48	63	58.115	ENSOANG00000019888	-	100	61.058	Ornithorhynchus_anatinus
ENSJJAG00000011495	Snrnp48	84	84.615	ENSOCUG00000005168	SNRNP48	100	83.882	Oryctolagus_cuniculus
ENSJJAG00000011495	Snrnp48	88	46.906	ENSORLG00000015654	snrnp48	82	47.945	Oryzias_latipes
ENSJJAG00000011495	Snrnp48	88	46.580	ENSORLG00020015976	snrnp48	70	47.751	Oryzias_latipes_hni
ENSJJAG00000011495	Snrnp48	88	47.557	ENSORLG00015022379	snrnp48	70	48.789	Oryzias_latipes_hsok
ENSJJAG00000011495	Snrnp48	83	46.875	ENSOMEG00000022007	snrnp48	82	47.222	Oryzias_melastigma
ENSJJAG00000011495	Snrnp48	92	82.958	ENSOGAG00000005275	SNRNP48	96	83.281	Otolemur_garnettii
ENSJJAG00000011495	Snrnp48	85	81.185	ENSOARG00000017319	SNRNP48	100	81.185	Ovis_aries
ENSJJAG00000011495	Snrnp48	100	85.841	ENSPPAG00000032873	SNRNP48	100	85.841	Pan_paniscus
ENSJJAG00000011495	Snrnp48	100	85.251	ENSPPRG00000004283	SNRNP48	100	85.251	Panthera_pardus
ENSJJAG00000011495	Snrnp48	85	85.366	ENSPTIG00000013502	SNRNP48	100	85.366	Panthera_tigris_altaica
ENSJJAG00000011495	Snrnp48	100	85.841	ENSPTRG00000017703	SNRNP48	100	85.841	Pan_troglodytes
ENSJJAG00000011495	Snrnp48	100	85.546	ENSPANG00000000771	SNRNP48	100	85.546	Papio_anubis
ENSJJAG00000011495	Snrnp48	95	45.217	ENSPKIG00000013703	snrnp48	59	48.582	Paramormyrops_kingsleyae
ENSJJAG00000011495	Snrnp48	88	58.917	ENSPSIG00000002213	SNRNP48	96	59.672	Pelodiscus_sinensis
ENSJJAG00000011495	Snrnp48	72	48.571	ENSPMGG00000008120	snrnp48	86	48.571	Periophthalmus_magnuspinnatus
ENSJJAG00000011495	Snrnp48	100	86.726	ENSPEMG00000008872	Snrnp48	100	86.431	Peromyscus_maniculatus_bairdii
ENSJJAG00000011495	Snrnp48	72	51.822	ENSPFOG00000003578	snrnp48	79	49.281	Poecilia_formosa
ENSJJAG00000011495	Snrnp48	66	51.111	ENSPLAG00000002290	snrnp48	76	51.111	Poecilia_latipinna
ENSJJAG00000011495	Snrnp48	72	51.012	ENSPMEG00000018033	snrnp48	79	48.561	Poecilia_mexicana
ENSJJAG00000011495	Snrnp48	71	51.240	ENSPREG00000018541	snrnp48	79	48.561	Poecilia_reticulata
ENSJJAG00000011495	Snrnp48	100	85.251	ENSPPYG00000016209	SNRNP48	100	85.251	Pongo_abelii
ENSJJAG00000011495	Snrnp48	79	68.165	ENSPCAG00000011991	SNRNP48	99	68.165	Procavia_capensis
ENSJJAG00000011495	Snrnp48	100	82.891	ENSPVAG00000002854	SNRNP48	100	82.891	Pteropus_vampyrus
ENSJJAG00000011495	Snrnp48	76	48.276	ENSPNYG00000015399	snrnp48	92	46.599	Pundamilia_nyererei
ENSJJAG00000011495	Snrnp48	100	84.366	ENSRNOG00000013756	Snrnp48	100	84.366	Rattus_norvegicus
ENSJJAG00000011495	Snrnp48	91	84.839	ENSRBIG00000043856	SNRNP48	97	85.197	Rhinopithecus_bieti
ENSJJAG00000011495	Snrnp48	100	85.251	ENSRROG00000043229	SNRNP48	100	85.251	Rhinopithecus_roxellana
ENSJJAG00000011495	Snrnp48	100	85.546	ENSSBOG00000019486	SNRNP48	100	85.546	Saimiri_boliviensis_boliviensis
ENSJJAG00000011495	Snrnp48	99	67.908	ENSSHAG00000014483	SNRNP48	100	67.908	Sarcophilus_harrisii
ENSJJAG00000011495	Snrnp48	73	50.199	ENSSFOG00015006610	snrnp48	68	47.222	Scleropages_formosus
ENSJJAG00000011495	Snrnp48	87	45.791	ENSSDUG00000014953	snrnp48	82	47.703	Seriola_dumerili
ENSJJAG00000011495	Snrnp48	87	47.368	ENSSLDG00000005989	snrnp48	79	49.270	Seriola_lalandi_dorsalis
ENSJJAG00000011495	Snrnp48	98	57.020	ENSSPUG00000006257	SNRNP48	85	62.207	Sphenodon_punctatus
ENSJJAG00000011495	Snrnp48	77	48.148	ENSSPAG00000006454	snrnp48	80	47.826	Stegastes_partitus
ENSJJAG00000011495	Snrnp48	83	62.199	ENSTGUG00000007575	SNRNP48	93	62.199	Taeniopygia_guttata
ENSJJAG00000011495	Snrnp48	73	49.801	ENSTRUG00000007031	snrnp48	78	48.529	Takifugu_rubripes
ENSJJAG00000011495	Snrnp48	71	47.934	ENSTNIG00000012977	-	71	47.934	Tetraodon_nigroviridis
ENSJJAG00000011495	Snrnp48	100	78.804	ENSTBEG00000015620	SNRNP48	100	68.732	Tupaia_belangeri
ENSJJAG00000011495	Snrnp48	100	82.891	ENSTTRG00000016715	SNRNP48	100	82.891	Tursiops_truncatus
ENSJJAG00000011495	Snrnp48	100	86.136	ENSUAMG00000003690	SNRNP48	100	86.136	Ursus_americanus
ENSJJAG00000011495	Snrnp48	85	80.488	ENSVPAG00000003557	SNRNP48	100	80.488	Vicugna_pacos
ENSJJAG00000011495	Snrnp48	100	84.412	ENSVVUG00000004996	SNRNP48	100	84.412	Vulpes_vulpes
ENSJJAG00000011495	Snrnp48	86	53.488	ENSXETG00000020447	snrnp48	97	49.853	Xenopus_tropicalis
ENSJJAG00000011495	Snrnp48	66	50.885	ENSXCOG00000004478	snrnp48	68	50.885	Xiphophorus_couchianus
ENSJJAG00000011495	Snrnp48	72	51.417	ENSXMAG00000013595	snrnp48	70	51.417	Xiphophorus_maculatus