EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000011501 (Gene tree)
Gene ID: 101608799
Gene Symbol: Gtf3a
Alias: 2010015D03Rik|2610111I01Rik|5330403M05Rik
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 9635 bases
Position: chrJH725469.1:9707685-9717319
Accession: 101608799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000006979	zf-C2H2	PF00096.26	4.9e-33	1	5
ENSJJAP00000006979	zf-C2H2	PF00096.26	4.9e-33	2	5
ENSJJAP00000006979	zf-C2H2	PF00096.26	4.9e-33	3	5
ENSJJAP00000006979	zf-C2H2	PF00096.26	4.9e-33	4	5
ENSJJAP00000006979	zf-C2H2	PF00096.26	4.9e-33	5	5
ENSJJAP00000006989	zf-C2H2	PF00096.26	8e-31	1	5
ENSJJAP00000006989	zf-C2H2	PF00096.26	8e-31	2	5
ENSJJAP00000006989	zf-C2H2	PF00096.26	8e-31	3	5
ENSJJAP00000006989	zf-C2H2	PF00096.26	8e-31	4	5
ENSJJAP00000006989	zf-C2H2	PF00096.26	8e-31	5	5
ENSJJAP00000006989	zf-met	PF12874.7	4.1e-06	1	1
ENSJJAP00000006979	zf-met	PF12874.7	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000013380	-	951	XM_012949067	ENSJJAP00000006979	311 (aa)	XP_012804521	-
ENSJJAT00000013390	-	810	-	ENSJJAP00000006989	269 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000011501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000011501's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000011501	Gtf3a	88	46.875	ENSJJAG00000000983	Zfp628	55	38.462
ENSJJAG00000011501	Gtf3a	90	34.973	ENSJJAG00000014350	Zfp961	70	34.973
ENSJJAG00000011501	Gtf3a	88	40.650	ENSJJAG00000021900	-	58	40.650
ENSJJAG00000011501	Gtf3a	89	54.386	ENSJJAG00000021785	Zfp574	60	52.941
ENSJJAG00000011501	Gtf3a	88	36.364	ENSJJAG00000023633	Zfp672	95	30.872
ENSJJAG00000011501	Gtf3a	99	37.190	ENSJJAG00000011934	Zfp865	72	36.800
ENSJJAG00000011501	Gtf3a	89	32.759	ENSJJAG00000023435	Zfp597	66	32.759
ENSJJAG00000011501	Gtf3a	88	39.024	ENSJJAG00000019878	Zfp1	59	38.462
ENSJJAG00000011501	Gtf3a	88	36.626	ENSJJAG00000020082	-	74	38.554
ENSJJAG00000011501	Gtf3a	90	47.619	ENSJJAG00000017493	Zfp236	63	46.377
ENSJJAG00000011501	Gtf3a	88	39.394	ENSJJAG00000018925	Zfp39	60	39.394
ENSJJAG00000011501	Gtf3a	66	50.000	ENSJJAG00000018599	Zfp784	50	50.000
ENSJJAG00000011501	Gtf3a	86	31.797	ENSJJAG00000013954	Zfp64	71	30.493
ENSJJAG00000011501	Gtf3a	88	41.270	ENSJJAG00000024260	-	63	41.667
ENSJJAG00000011501	Gtf3a	89	32.558	ENSJJAG00000000816	Zfp319	81	31.939
ENSJJAG00000011501	Gtf3a	88	44.615	ENSJJAG00000014531	Zfp661	58	44.615
ENSJJAG00000011501	Gtf3a	81	37.778	ENSJJAG00000017495	-	50	39.286
ENSJJAG00000011501	Gtf3a	88	36.364	ENSJJAG00000011464	Prdm5	78	36.220
ENSJJAG00000011501	Gtf3a	83	34.132	ENSJJAG00000020922	-	80	32.683
ENSJJAG00000011501	Gtf3a	88	37.158	ENSJJAG00000012972	Zfp709	70	37.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000011501	Gtf3a	99	78.710	ENSAMEG00000015824	GTF3A	91	78.710	Ailuropoda_melanoleuca
ENSJJAG00000011501	Gtf3a	89	80.144	ENSBTAG00000012600	GTF3A	82	80.144	Bos_taurus
ENSJJAG00000011501	Gtf3a	94	78.767	ENSCAFG00000006794	GTF3A	85	78.767	Canis_familiaris
ENSJJAG00000011501	Gtf3a	88	81.013	ENSCHIG00000010341	-	82	79.783	Capra_hircus
ENSJJAG00000011501	Gtf3a	95	76.351	ENSCHIG00000021040	-	73	76.351	Capra_hircus
ENSJJAG00000011501	Gtf3a	99	76.452	ENSTSYG00000004206	GTF3A	98	76.452	Carlito_syrichta
ENSJJAG00000011501	Gtf3a	97	77.600	ENSCAPG00000015862	GTF3A	98	78.764	Cavia_aperea
ENSJJAG00000011501	Gtf3a	89	83.264	ENSCPOG00000010143	GTF3A	87	83.264	Cavia_porcellus
ENSJJAG00000011501	Gtf3a	96	77.358	ENSCLAG00000003912	GTF3A	84	82.625	Chinchilla_lanigera
ENSJJAG00000011501	Gtf3a	99	76.623	ENSDNOG00000037405	-	72	76.623	Dasypus_novemcinctus
ENSJJAG00000011501	Gtf3a	84	82.424	ENSETEG00000003225	GTF3A	61	75.536	Echinops_telfairi
ENSJJAG00000011501	Gtf3a	100	78.457	ENSEASG00005022495	-	74	78.457	Equus_asinus_asinus
ENSJJAG00000011501	Gtf3a	89	74.059	ENSEASG00005013216	-	75	73.358	Equus_asinus_asinus
ENSJJAG00000011501	Gtf3a	100	73.312	ENSECAG00000024825	-	76	73.312	Equus_caballus
ENSJJAG00000011501	Gtf3a	100	78.778	ENSECAG00000014803	GTF3A	87	78.333	Equus_caballus
ENSJJAG00000011501	Gtf3a	99	77.670	ENSEEUG00000004307	GTF3A	80	77.670	Erinaceus_europaeus
ENSJJAG00000011501	Gtf3a	99	78.065	ENSFCAG00000006982	GTF3A	76	78.065	Felis_catus
ENSJJAG00000011501	Gtf3a	92	80.392	ENSFDAG00000016841	GTF3A	84	84.585	Fukomys_damarensis
ENSJJAG00000011501	Gtf3a	91	84.810	ENSHGLG00000004173	GTF3A	85	83.984	Heterocephalus_glaber_female
ENSJJAG00000011501	Gtf3a	91	84.810	ENSHGLG00100011561	GTF3A	85	83.984	Heterocephalus_glaber_male
ENSJJAG00000011501	Gtf3a	88	83.966	ENSSTOG00000013853	GTF3A	87	82.812	Ictidomys_tridecemlineatus
ENSJJAG00000011501	Gtf3a	99	71.019	ENSLAFG00000027315	GTF3A	90	71.019	Loxodonta_africana
ENSJJAG00000011501	Gtf3a	100	76.433	ENSMAUG00000016253	Gtf3a	90	76.433	Mesocricetus_auratus
ENSJJAG00000011501	Gtf3a	99	77.273	ENSMICG00000014763	GTF3A	94	76.510	Microcebus_murinus
ENSJJAG00000011501	Gtf3a	88	86.076	MGP_CAROLIEiJ_G0028031	Gtf3a	87	79.856	Mus_caroli
ENSJJAG00000011501	Gtf3a	88	85.232	ENSMUSG00000016503	Gtf3a	87	79.137	Mus_musculus
ENSJJAG00000011501	Gtf3a	99	76.452	MGP_PahariEiJ_G0024597	Gtf3a	90	77.492	Mus_pahari
ENSJJAG00000011501	Gtf3a	99	76.375	MGP_SPRETEiJ_G0029029	Gtf3a	90	76.375	Mus_spretus
ENSJJAG00000011501	Gtf3a	99	79.612	ENSMPUG00000005835	GTF3A	89	79.612	Mustela_putorius_furo
ENSJJAG00000011501	Gtf3a	88	83.898	ENSMLUG00000002158	GTF3A	90	81.786	Myotis_lucifugus
ENSJJAG00000011501	Gtf3a	99	80.259	ENSNLEG00000000331	GTF3A	90	80.259	Nomascus_leucogenys
ENSJJAG00000011501	Gtf3a	99	53.398	ENSMEUG00000010089	GTF3A	95	53.398	Notamacropus_eugenii
ENSJJAG00000011501	Gtf3a	90	71.786	ENSOPRG00000000854	-	70	71.786	Ochotona_princeps
ENSJJAG00000011501	Gtf3a	99	79.612	ENSODEG00000006725	GTF3A	77	79.612	Octodon_degus
ENSJJAG00000011501	Gtf3a	99	78.317	ENSOCUG00000011713	GTF3A	76	78.317	Oryctolagus_cuniculus
ENSJJAG00000011501	Gtf3a	99	79.677	ENSOGAG00000014589	GTF3A	90	79.677	Otolemur_garnettii
ENSJJAG00000011501	Gtf3a	89	74.007	ENSOARG00000012551	GTF3A	81	74.007	Ovis_aries
ENSJJAG00000011501	Gtf3a	99	78.065	ENSPPRG00000002368	GTF3A	90	78.065	Panthera_pardus
ENSJJAG00000011501	Gtf3a	96	77.258	ENSPTIG00000018958	GTF3A	82	77.258	Panthera_tigris_altaica
ENSJJAG00000011501	Gtf3a	99	50.192	ENSPSIG00000011722	GTF3A	98	50.192	Pelodiscus_sinensis
ENSJJAG00000011501	Gtf3a	99	79.612	ENSPPYG00000005235	GTF3A	91	79.612	Pongo_abelii
ENSJJAG00000011501	Gtf3a	99	77.597	ENSPCOG00000016742	GTF3A	74	77.597	Propithecus_coquereli
ENSJJAG00000011501	Gtf3a	99	75.405	ENSPVAG00000012837	GTF3A	78	75.405	Pteropus_vampyrus
ENSJJAG00000011501	Gtf3a	99	72.492	ENSRROG00000043264	GTF3A	88	72.492	Rhinopithecus_roxellana
ENSJJAG00000011501	Gtf3a	99	73.139	ENSSHAG00000016965	GTF3A	92	73.139	Sarcophilus_harrisii
ENSJJAG00000011501	Gtf3a	88	65.517	ENSSARG00000010692	GTF3A	75	65.809	Sorex_araneus
ENSJJAG00000011501	Gtf3a	99	64.630	ENSSPUG00000005307	GTF3A	88	64.630	Sphenodon_punctatus
ENSJJAG00000011501	Gtf3a	88	46.218	ENSTRUG00000005241	gtf3ab	89	44.068	Takifugu_rubripes
ENSJJAG00000011501	Gtf3a	88	83.913	ENSTBEG00000012075	GTF3A	61	81.641	Tupaia_belangeri
ENSJJAG00000011501	Gtf3a	99	69.481	ENSTTRG00000008538	GTF3A	79	69.481	Tursiops_truncatus
ENSJJAG00000011501	Gtf3a	99	78.065	ENSUAMG00000019189	GTF3A	91	78.065	Ursus_americanus
ENSJJAG00000011501	Gtf3a	99	76.849	ENSUMAG00000016941	GTF3A	98	76.849	Ursus_maritimus
ENSJJAG00000011501	Gtf3a	95	78.114	ENSVPAG00000004995	GTF3A	99	78.114	Vicugna_pacos
ENSJJAG00000011501	Gtf3a	99	76.774	ENSVVUG00000009197	GTF3A	90	76.774	Vulpes_vulpes