EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000011727 (Gene tree)
Gene ID: 101610515
Gene Symbol: Ddx42
Alias: 1810047H21Rik|B430002H05Rik|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 29752 bases
Position: chrJH725452.1:2440081-2469832
Accession: 101610515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000007320	ResIII	PF04851.15	5.7e-07	1	1
ENSJJAP00000007320	DEAD	PF00270.29	5.5e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000013729	-	2760	XM_004655076	ENSJJAP00000007320	919 (aa)	XP_004655133	-

Gene Model

Click here to download ENSJJAG00000011727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000011727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000011727	Ddx42	60	37.786	ENSJJAG00000017587	Ddx5	78	40.741
ENSJJAG00000011727	Ddx42	53	31.211	ENSJJAG00000023695	Ddx59	74	31.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000011727	Ddx42	100	94.574	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSJJAG00000011727	Ddx42	91	75.939	ENSAPOG00000017675	ddx42	98	73.539	Acanthochromis_polyacanthus
ENSJJAG00000011727	Ddx42	100	95.080	ENSAMEG00000003200	DDX42	100	95.080	Ailuropoda_melanoleuca
ENSJJAG00000011727	Ddx42	84	71.501	ENSACIG00000007376	ddx42	99	73.511	Amphilophus_citrinellus
ENSJJAG00000011727	Ddx42	91	76.478	ENSAOCG00000003520	ddx42	99	72.370	Amphiprion_ocellaris
ENSJJAG00000011727	Ddx42	100	71.658	ENSAPEG00000000984	ddx42	99	72.698	Amphiprion_percula
ENSJJAG00000011727	Ddx42	99	71.991	ENSATEG00000022920	ddx42	99	73.448	Anabas_testudineus
ENSJJAG00000011727	Ddx42	100	83.544	ENSAPLG00000010544	DDX42	100	84.615	Anas_platyrhynchos
ENSJJAG00000011727	Ddx42	100	84.452	ENSACAG00000003994	DDX42	99	84.681	Anolis_carolinensis
ENSJJAG00000011727	Ddx42	100	95.489	ENSANAG00000035693	DDX42	100	95.489	Aotus_nancymaae
ENSJJAG00000011727	Ddx42	91	76.631	ENSACLG00000025113	ddx42	99	73.504	Astatotilapia_calliptera
ENSJJAG00000011727	Ddx42	82	80.871	ENSAMXG00000011435	ddx42	100	70.601	Astyanax_mexicanus
ENSJJAG00000011727	Ddx42	100	94.444	ENSBTAG00000021058	DDX42	100	94.444	Bos_taurus
ENSJJAG00000011727	Ddx42	65	52.673	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSJJAG00000011727	Ddx42	100	95.596	ENSCJAG00000019649	DDX42	99	97.925	Callithrix_jacchus
ENSJJAG00000011727	Ddx42	100	95.401	ENSCAFG00000012818	DDX42	100	95.401	Canis_familiaris
ENSJJAG00000011727	Ddx42	100	95.508	ENSCAFG00020026631	DDX42	100	95.508	Canis_lupus_dingo
ENSJJAG00000011727	Ddx42	100	94.468	ENSCHIG00000014431	DDX42	100	94.468	Capra_hircus
ENSJJAG00000011727	Ddx42	100	94.130	ENSTSYG00000001380	DDX42	100	94.130	Carlito_syrichta
ENSJJAG00000011727	Ddx42	73	74.889	ENSCAPG00000013621	DDX42	94	74.889	Cavia_aperea
ENSJJAG00000011727	Ddx42	100	96.125	ENSCPOG00000005633	DDX42	100	96.125	Cavia_porcellus
ENSJJAG00000011727	Ddx42	100	90.215	ENSCCAG00000020612	DDX42	100	94.205	Cebus_capucinus
ENSJJAG00000011727	Ddx42	100	95.059	ENSCATG00000030490	DDX42	100	95.059	Cercocebus_atys
ENSJJAG00000011727	Ddx42	100	96.344	ENSCLAG00000003497	DDX42	100	96.344	Chinchilla_lanigera
ENSJJAG00000011727	Ddx42	100	90.688	ENSCSAG00000003914	DDX42	100	90.688	Chlorocebus_sabaeus
ENSJJAG00000011727	Ddx42	79	94.643	ENSCHOG00000006241	DDX42	79	94.643	Choloepus_hoffmanni
ENSJJAG00000011727	Ddx42	100	83.612	ENSCPBG00000026682	DDX42	100	84.029	Chrysemys_picta_bellii
ENSJJAG00000011727	Ddx42	100	95.059	ENSCANG00000034663	DDX42	99	96.691	Colobus_angolensis_palliatus
ENSJJAG00000011727	Ddx42	100	94.952	ENSCGRG00001009775	Ddx42	100	95.166	Cricetulus_griseus_chok1gshd
ENSJJAG00000011727	Ddx42	100	94.952	ENSCGRG00000011718	Ddx42	100	95.166	Cricetulus_griseus_crigri
ENSJJAG00000011727	Ddx42	91	75.149	ENSCSEG00000021574	ddx42	99	71.152	Cynoglossus_semilaevis
ENSJJAG00000011727	Ddx42	100	70.874	ENSCVAG00000011404	ddx42	99	71.798	Cyprinodon_variegatus
ENSJJAG00000011727	Ddx42	100	69.968	ENSDARG00000037928	ddx42	99	71.828	Danio_rerio
ENSJJAG00000011727	Ddx42	100	90.076	ENSDNOG00000007961	DDX42	100	90.076	Dasypus_novemcinctus
ENSJJAG00000011727	Ddx42	100	88.077	ENSDORG00000004199	Ddx42	100	87.755	Dipodomys_ordii
ENSJJAG00000011727	Ddx42	67	60.353	FBgn0036104	CG6418	87	56.052	Drosophila_melanogaster
ENSJJAG00000011727	Ddx42	81	73.342	ENSEBUG00000001155	ddx42	94	70.328	Eptatretus_burgeri
ENSJJAG00000011727	Ddx42	100	95.620	ENSEASG00005013089	DDX42	100	95.620	Equus_asinus_asinus
ENSJJAG00000011727	Ddx42	100	95.620	ENSECAG00000022684	DDX42	100	95.620	Equus_caballus
ENSJJAG00000011727	Ddx42	67	97.297	ENSEEUG00000009144	DDX42	85	97.297	Erinaceus_europaeus
ENSJJAG00000011727	Ddx42	100	70.011	ENSELUG00000020593	ddx42	100	70.957	Esox_lucius
ENSJJAG00000011727	Ddx42	100	95.615	ENSFCAG00000003499	DDX42	100	95.615	Felis_catus
ENSJJAG00000011727	Ddx42	90	89.247	ENSFALG00000004675	DDX42	74	89.008	Ficedula_albicollis
ENSJJAG00000011727	Ddx42	100	96.030	ENSFDAG00000020516	DDX42	100	96.030	Fukomys_damarensis
ENSJJAG00000011727	Ddx42	100	70.108	ENSFHEG00000023290	ddx42	99	71.061	Fundulus_heteroclitus
ENSJJAG00000011727	Ddx42	77	78.138	ENSGMOG00000004595	ddx42	88	78.138	Gadus_morhua
ENSJJAG00000011727	Ddx42	100	82.970	ENSGALG00000000581	DDX42	100	82.830	Gallus_gallus
ENSJJAG00000011727	Ddx42	91	74.911	ENSGAFG00000011846	ddx42	96	73.244	Gambusia_affinis
ENSJJAG00000011727	Ddx42	99	68.427	ENSGACG00000009782	ddx42	100	68.245	Gasterosteus_aculeatus
ENSJJAG00000011727	Ddx42	100	83.787	ENSGAGG00000024411	DDX42	99	83.682	Gopherus_agassizii
ENSJJAG00000011727	Ddx42	100	95.166	ENSGGOG00000006779	DDX42	100	95.166	Gorilla_gorilla
ENSJJAG00000011727	Ddx42	91	76.868	ENSHBUG00000008705	ddx42	99	73.718	Haplochromis_burtoni
ENSJJAG00000011727	Ddx42	100	91.828	ENSHGLG00000010024	DDX42	100	91.828	Heterocephalus_glaber_female
ENSJJAG00000011727	Ddx42	100	95.508	ENSHGLG00100004479	-	100	95.508	Heterocephalus_glaber_male
ENSJJAG00000011727	Ddx42	93	73.103	ENSHGLG00100007138	-	95	72.874	Heterocephalus_glaber_male
ENSJJAG00000011727	Ddx42	84	78.289	ENSHCOG00000003357	ddx42	99	70.390	Hippocampus_comes
ENSJJAG00000011727	Ddx42	100	66.631	ENSIPUG00000013327	ddx42	100	70.740	Ictalurus_punctatus
ENSJJAG00000011727	Ddx42	100	96.674	ENSSTOG00000008922	DDX42	100	96.674	Ictidomys_tridecemlineatus
ENSJJAG00000011727	Ddx42	99	70.539	ENSKMAG00000009914	ddx42	99	72.553	Kryptolebias_marmoratus
ENSJJAG00000011727	Ddx42	100	67.382	ENSLBEG00000004687	ddx42	100	67.880	Labrus_bergylta
ENSJJAG00000011727	Ddx42	99	76.496	ENSLACG00000013476	DDX42	97	78.680	Latimeria_chalumnae
ENSJJAG00000011727	Ddx42	100	74.866	ENSLOCG00000011764	ddx42	100	74.544	Lepisosteus_oculatus
ENSJJAG00000011727	Ddx42	100	94.979	ENSLAFG00000003249	DDX42	100	94.979	Loxodonta_africana
ENSJJAG00000011727	Ddx42	100	94.952	ENSMFAG00000031356	DDX42	100	94.952	Macaca_fascicularis
ENSJJAG00000011727	Ddx42	100	94.973	ENSMMUG00000016762	DDX42	100	94.973	Macaca_mulatta
ENSJJAG00000011727	Ddx42	100	94.952	ENSMNEG00000038250	DDX42	100	94.952	Macaca_nemestrina
ENSJJAG00000011727	Ddx42	100	94.468	ENSMLEG00000043080	DDX42	100	94.468	Mandrillus_leucophaeus
ENSJJAG00000011727	Ddx42	91	77.116	ENSMAMG00000021888	ddx42	98	72.679	Mastacembelus_armatus
ENSJJAG00000011727	Ddx42	91	76.631	ENSMZEG00005023103	ddx42	99	73.504	Maylandia_zebra
ENSJJAG00000011727	Ddx42	100	83.455	ENSMGAG00000001822	DDX42	100	82.934	Meleagris_gallopavo
ENSJJAG00000011727	Ddx42	76	96.875	ENSMAUG00000020774	-	94	96.875	Mesocricetus_auratus
ENSJJAG00000011727	Ddx42	100	95.914	ENSMICG00000009952	DDX42	100	95.914	Microcebus_murinus
ENSJJAG00000011727	Ddx42	100	94.522	ENSMOCG00000015504	Ddx42	100	94.522	Microtus_ochrogaster
ENSJJAG00000011727	Ddx42	90	72.196	ENSMMOG00000016963	ddx42	87	71.181	Mola_mola
ENSJJAG00000011727	Ddx42	51	97.859	ENSMODG00000009917	-	98	97.859	Monodelphis_domestica
ENSJJAG00000011727	Ddx42	99	71.231	ENSMALG00000007800	ddx42	99	72.610	Monopterus_albus
ENSJJAG00000011727	Ddx42	100	95.811	MGP_CAROLIEiJ_G0017314	Ddx42	100	95.811	Mus_caroli
ENSJJAG00000011727	Ddx42	100	95.596	ENSMUSG00000020705	Ddx42	100	95.596	Mus_musculus
ENSJJAG00000011727	Ddx42	76	99.255	MGP_PahariEiJ_G0018444	-	100	99.255	Mus_pahari
ENSJJAG00000011727	Ddx42	100	95.811	MGP_SPRETEiJ_G0018158	Ddx42	100	95.811	Mus_spretus
ENSJJAG00000011727	Ddx42	100	94.894	ENSMPUG00000014921	DDX42	100	94.894	Mustela_putorius_furo
ENSJJAG00000011727	Ddx42	100	92.526	ENSMLUG00000011645	DDX42	100	93.579	Myotis_lucifugus
ENSJJAG00000011727	Ddx42	100	96.552	ENSNGAG00000021897	Ddx42	100	96.552	Nannospalax_galili
ENSJJAG00000011727	Ddx42	91	75.592	ENSNBRG00000004466	ddx42	99	72.436	Neolamprologus_brichardi
ENSJJAG00000011727	Ddx42	100	95.156	ENSNLEG00000004248	DDX42	99	96.552	Nomascus_leucogenys
ENSJJAG00000011727	Ddx42	75	82.444	ENSMEUG00000013227	-	85	82.444	Notamacropus_eugenii
ENSJJAG00000011727	Ddx42	100	94.136	ENSOPRG00000014960	DDX42	100	94.136	Ochotona_princeps
ENSJJAG00000011727	Ddx42	100	92.903	ENSODEG00000007810	DDX42	100	92.903	Octodon_degus
ENSJJAG00000011727	Ddx42	91	76.896	ENSONIG00000000734	ddx42	99	73.718	Oreochromis_niloticus
ENSJJAG00000011727	Ddx42	59	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSJJAG00000011727	Ddx42	96	94.955	ENSOCUG00000004304	DDX42	88	94.955	Oryctolagus_cuniculus
ENSJJAG00000011727	Ddx42	100	71.767	ENSORLG00000002395	ddx42	100	70.390	Oryzias_latipes
ENSJJAG00000011727	Ddx42	100	72.121	ENSORLG00020011621	ddx42	100	72.108	Oryzias_latipes_hni
ENSJJAG00000011727	Ddx42	100	71.261	ENSORLG00015004487	ddx42	100	72.336	Oryzias_latipes_hsok
ENSJJAG00000011727	Ddx42	81	82.290	ENSOMEG00000020093	ddx42	100	72.403	Oryzias_melastigma
ENSJJAG00000011727	Ddx42	100	94.462	ENSOGAG00000006872	DDX42	100	94.462	Otolemur_garnettii
ENSJJAG00000011727	Ddx42	100	93.776	ENSOARG00000013540	DDX42	100	93.776	Ovis_aries
ENSJJAG00000011727	Ddx42	100	95.166	ENSPPAG00000007496	DDX42	100	95.166	Pan_paniscus
ENSJJAG00000011727	Ddx42	100	95.722	ENSPPRG00000002740	DDX42	100	95.722	Panthera_pardus
ENSJJAG00000011727	Ddx42	100	95.615	ENSPTIG00000009932	DDX42	100	95.615	Panthera_tigris_altaica
ENSJJAG00000011727	Ddx42	100	95.166	ENSPTRG00000009523	DDX42	100	95.166	Pan_troglodytes
ENSJJAG00000011727	Ddx42	100	94.952	ENSPANG00000020990	DDX42	100	94.952	Papio_anubis
ENSJJAG00000011727	Ddx42	100	70.996	ENSPKIG00000002901	ddx42	100	71.212	Paramormyrops_kingsleyae
ENSJJAG00000011727	Ddx42	86	91.056	ENSPSIG00000010289	DDX42	97	91.364	Pelodiscus_sinensis
ENSJJAG00000011727	Ddx42	100	67.738	ENSPMGG00000009323	ddx42	100	69.198	Periophthalmus_magnuspinnatus
ENSJJAG00000011727	Ddx42	100	95.601	ENSPEMG00000006755	Ddx42	100	95.601	Peromyscus_maniculatus_bairdii
ENSJJAG00000011727	Ddx42	81	72.346	ENSPMAG00000005580	ddx42	100	73.001	Petromyzon_marinus
ENSJJAG00000011727	Ddx42	100	90.476	ENSPCIG00000009093	DDX42	100	90.476	Phascolarctos_cinereus
ENSJJAG00000011727	Ddx42	100	69.656	ENSPFOG00000014104	ddx42	100	71.732	Poecilia_formosa
ENSJJAG00000011727	Ddx42	100	69.656	ENSPLAG00000010522	ddx42	100	71.732	Poecilia_latipinna
ENSJJAG00000011727	Ddx42	100	70.084	ENSPMEG00000010744	ddx42	100	71.203	Poecilia_mexicana
ENSJJAG00000011727	Ddx42	100	69.470	ENSPREG00000009926	ddx42	100	70.293	Poecilia_reticulata
ENSJJAG00000011727	Ddx42	100	92.479	ENSPPYG00000008531	DDX42	100	92.479	Pongo_abelii
ENSJJAG00000011727	Ddx42	92	89.095	ENSPCAG00000002474	DDX42	100	89.095	Procavia_capensis
ENSJJAG00000011727	Ddx42	100	85.256	ENSPCOG00000001559	DDX42	98	88.218	Propithecus_coquereli
ENSJJAG00000011727	Ddx42	100	90.822	ENSPVAG00000000160	DDX42	100	90.928	Pteropus_vampyrus
ENSJJAG00000011727	Ddx42	75	74.429	ENSPNYG00000013954	ddx42	97	70.833	Pundamilia_nyererei
ENSJJAG00000011727	Ddx42	79	80.654	ENSPNAG00000017352	ddx42	99	69.665	Pygocentrus_nattereri
ENSJJAG00000011727	Ddx42	100	95.166	ENSRNOG00000009474	Ddx42	100	95.381	Rattus_norvegicus
ENSJJAG00000011727	Ddx42	100	95.059	ENSRBIG00000004781	DDX42	99	96.691	Rhinopithecus_bieti
ENSJJAG00000011727	Ddx42	100	95.059	ENSRROG00000029794	DDX42	100	95.059	Rhinopithecus_roxellana
ENSJJAG00000011727	Ddx42	100	95.591	ENSSBOG00000029624	DDX42	100	95.591	Saimiri_boliviensis_boliviensis
ENSJJAG00000011727	Ddx42	71	60.688	ENSSHAG00000007919	-	99	60.389	Sarcophilus_harrisii
ENSJJAG00000011727	Ddx42	100	90.688	ENSSHAG00000012896	-	100	90.688	Sarcophilus_harrisii
ENSJJAG00000011727	Ddx42	82	81.627	ENSSFOG00015014064	ddx42	82	81.627	Scleropages_formosus
ENSJJAG00000011727	Ddx42	99	71.751	ENSSMAG00000009077	ddx42	100	72.005	Scophthalmus_maximus
ENSJJAG00000011727	Ddx42	99	72.776	ENSSDUG00000022221	ddx42	99	72.737	Seriola_dumerili
ENSJJAG00000011727	Ddx42	99	72.541	ENSSLDG00000018483	ddx42	100	72.103	Seriola_lalandi_dorsalis
ENSJJAG00000011727	Ddx42	100	93.910	ENSSARG00000009847	DDX42	100	93.910	Sorex_araneus
ENSJJAG00000011727	Ddx42	100	84.172	ENSSPUG00000018806	DDX42	100	83.543	Sphenodon_punctatus
ENSJJAG00000011727	Ddx42	91	76.568	ENSSPAG00000013055	ddx42	99	72.484	Stegastes_partitus
ENSJJAG00000011727	Ddx42	85	93.548	ENSSSCG00000017289	DDX42	97	93.548	Sus_scrofa
ENSJJAG00000011727	Ddx42	100	83.526	ENSTGUG00000001931	DDX42	100	83.526	Taeniopygia_guttata
ENSJJAG00000011727	Ddx42	99	70.779	ENSTRUG00000010711	ddx42	99	81.333	Takifugu_rubripes
ENSJJAG00000011727	Ddx42	83	93.693	ENSTBEG00000010159	DDX42	100	93.693	Tupaia_belangeri
ENSJJAG00000011727	Ddx42	100	95.091	ENSTTRG00000006962	DDX42	100	95.091	Tursiops_truncatus
ENSJJAG00000011727	Ddx42	100	94.973	ENSUAMG00000007321	DDX42	100	94.973	Ursus_americanus
ENSJJAG00000011727	Ddx42	100	94.427	ENSUMAG00000017438	DDX42	100	94.427	Ursus_maritimus
ENSJJAG00000011727	Ddx42	100	85.791	ENSVPAG00000009633	DDX42	100	85.791	Vicugna_pacos
ENSJJAG00000011727	Ddx42	100	95.615	ENSVVUG00000006095	DDX42	100	95.615	Vulpes_vulpes
ENSJJAG00000011727	Ddx42	100	76.385	ENSXETG00000003245	ddx42	100	76.440	Xenopus_tropicalis
ENSJJAG00000011727	Ddx42	84	70.558	ENSXCOG00000017560	ddx42	97	71.556	Xiphophorus_couchianus
ENSJJAG00000011727	Ddx42	100	71.383	ENSXMAG00000008138	ddx42	100	72.240	Xiphophorus_maculatus