EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000011788 (Gene tree)
Gene ID: 101609081
Gene Symbol: Sf1
Alias: CW17R|MZFM|WBP4|Zfp162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 14961 bases
Position: chrJH725456.1:2705518-2720478
Accession: 101609081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000007373	KH_1	PF00013.29	2.3e-07	1	1
ENSJJAP00000007384	KH_1	PF00013.29	2.4e-07	1	1
ENSJJAP00000007384	zf-CCHC	PF00098.23	0.00016	1	1
ENSJJAP00000007373	zf-CCHC	PF00098.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000013784	-	3587	XM_004656633	ENSJJAP00000007373	639 (aa)	XP_004656690	UPI000332EF8A
ENSJJAT00000013795	-	3153	XM_004656634	ENSJJAP00000007384	638 (aa)	XP_004656691	UPI0003332913

Gene Model

Click here to download ENSJJAG00000011788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000011788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000011788	Sf1	59	80.928	ENSAPOG00000012341	sf1	60	76.047	Acanthochromis_polyacanthus
ENSJJAG00000011788	Sf1	99	91.446	ENSAMEG00000017828	SF1	91	94.567	Ailuropoda_melanoleuca
ENSJJAG00000011788	Sf1	58	82.979	ENSACIG00000016514	sf1	62	78.282	Amphilophus_citrinellus
ENSJJAG00000011788	Sf1	59	80.670	ENSAOCG00000010934	sf1	61	76.112	Amphiprion_ocellaris
ENSJJAG00000011788	Sf1	59	80.670	ENSAPEG00000009498	sf1	61	76.112	Amphiprion_percula
ENSJJAG00000011788	Sf1	58	82.368	ENSATEG00000001894	sf1	60	77.566	Anabas_testudineus
ENSJJAG00000011788	Sf1	100	99.687	ENSANAG00000026664	-	100	99.687	Aotus_nancymaae
ENSJJAG00000011788	Sf1	96	87.092	ENSANAG00000022607	-	99	87.396	Aotus_nancymaae
ENSJJAG00000011788	Sf1	57	84.553	ENSACLG00000007633	sf1	61	79.805	Astatotilapia_calliptera
ENSJJAG00000011788	Sf1	58	86.364	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSJJAG00000011788	Sf1	100	99.844	ENSBTAG00000001035	SF1	100	99.844	Bos_taurus
ENSJJAG00000011788	Sf1	100	99.844	ENSCJAG00000002780	SF1	100	99.844	Callithrix_jacchus
ENSJJAG00000011788	Sf1	100	99.687	ENSCAFG00000014239	SF1	100	99.687	Canis_familiaris
ENSJJAG00000011788	Sf1	100	99.844	ENSCAFG00020014381	SF1	100	99.844	Canis_lupus_dingo
ENSJJAG00000011788	Sf1	100	99.844	ENSCHIG00000025867	SF1	100	99.844	Capra_hircus
ENSJJAG00000011788	Sf1	98	78.571	ENSCAPG00000010762	SF1	100	78.571	Cavia_aperea
ENSJJAG00000011788	Sf1	98	99.203	ENSCPOG00000012290	SF1	100	99.203	Cavia_porcellus
ENSJJAG00000011788	Sf1	100	80.282	ENSCCAG00000023781	-	94	84.982	Cebus_capucinus
ENSJJAG00000011788	Sf1	100	99.687	ENSCCAG00000037881	SF1	100	99.687	Cebus_capucinus
ENSJJAG00000011788	Sf1	100	99.844	ENSCATG00000011564	SF1	100	99.844	Cercocebus_atys
ENSJJAG00000011788	Sf1	83	99.433	ENSCSAG00000007258	SF1	97	99.433	Chlorocebus_sabaeus
ENSJJAG00000011788	Sf1	65	93.541	ENSCHOG00000006008	SF1	79	93.541	Choloepus_hoffmanni
ENSJJAG00000011788	Sf1	81	86.680	ENSCPBG00000023763	SF1	66	85.328	Chrysemys_picta_bellii
ENSJJAG00000011788	Sf1	90	47.579	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSJJAG00000011788	Sf1	100	99.844	ENSCANG00000042201	SF1	100	99.844	Colobus_angolensis_palliatus
ENSJJAG00000011788	Sf1	100	99.687	ENSCGRG00001003677	Sf1	100	99.687	Cricetulus_griseus_chok1gshd
ENSJJAG00000011788	Sf1	82	98.095	ENSCGRG00000001708	Sf1	97	98.095	Cricetulus_griseus_crigri
ENSJJAG00000011788	Sf1	62	78.818	ENSCSEG00000014375	sf1	57	76.755	Cynoglossus_semilaevis
ENSJJAG00000011788	Sf1	58	84.595	ENSCVAG00000001670	sf1	63	79.218	Cyprinodon_variegatus
ENSJJAG00000011788	Sf1	79	81.638	ENSDARG00000008188	sf1	72	79.021	Danio_rerio
ENSJJAG00000011788	Sf1	83	98.866	ENSDNOG00000001282	SF1	97	98.866	Dasypus_novemcinctus
ENSJJAG00000011788	Sf1	100	99.844	ENSDORG00000016334	Sf1	100	99.844	Dipodomys_ordii
ENSJJAG00000011788	Sf1	92	92.308	ENSETEG00000012830	SF1	82	91.282	Echinops_telfairi
ENSJJAG00000011788	Sf1	83	99.055	ENSEASG00005018272	SF1	97	99.055	Equus_asinus_asinus
ENSJJAG00000011788	Sf1	83	99.244	ENSECAG00000024544	SF1	97	99.244	Equus_caballus
ENSJJAG00000011788	Sf1	62	98.982	ENSEEUG00000001058	SF1	100	98.982	Erinaceus_europaeus
ENSJJAG00000011788	Sf1	58	81.698	ENSELUG00000013225	sf1	54	78.469	Esox_lucius
ENSJJAG00000011788	Sf1	100	99.687	ENSFCAG00000012231	SF1	100	99.687	Felis_catus
ENSJJAG00000011788	Sf1	98	90.938	ENSFDAG00000009833	SF1	99	91.693	Fukomys_damarensis
ENSJJAG00000011788	Sf1	59	81.443	ENSFHEG00000022656	sf1	61	76.334	Fundulus_heteroclitus
ENSJJAG00000011788	Sf1	52	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSJJAG00000011788	Sf1	59	84.156	ENSGAFG00000019284	sf1	78	80.476	Gambusia_affinis
ENSJJAG00000011788	Sf1	71	89.231	ENSGAGG00000021691	SF1	72	85.328	Gopherus_agassizii
ENSJJAG00000011788	Sf1	58	83.158	ENSHBUG00000011598	sf1	61	77.494	Haplochromis_burtoni
ENSJJAG00000011788	Sf1	100	99.530	ENSHGLG00000009541	SF1	100	99.530	Heterocephalus_glaber_female
ENSJJAG00000011788	Sf1	95	85.075	ENSHGLG00100013879	-	99	87.894	Heterocephalus_glaber_male
ENSJJAG00000011788	Sf1	68	89.195	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSJJAG00000011788	Sf1	72	86.555	ENSHGLG00100008255	-	94	86.345	Heterocephalus_glaber_male
ENSJJAG00000011788	Sf1	59	81.347	ENSHCOG00000011388	sf1	58	76.998	Hippocampus_comes
ENSJJAG00000011788	Sf1	98	99.841	ENSSTOG00000009790	-	100	99.841	Ictidomys_tridecemlineatus
ENSJJAG00000011788	Sf1	73	96.667	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSJJAG00000011788	Sf1	60	82.653	ENSKMAG00000005854	sf1	63	77.518	Kryptolebias_marmoratus
ENSJJAG00000011788	Sf1	75	82.723	ENSLBEG00000019836	sf1	52	86.053	Labrus_bergylta
ENSJJAG00000011788	Sf1	65	78.571	ENSLACG00000018493	SF1	74	78.795	Latimeria_chalumnae
ENSJJAG00000011788	Sf1	58	85.561	ENSLOCG00000002130	sf1	59	80.296	Lepisosteus_oculatus
ENSJJAG00000011788	Sf1	99	95.349	ENSLAFG00000007201	SF1	100	95.349	Loxodonta_africana
ENSJJAG00000011788	Sf1	100	99.844	ENSMFAG00000033122	SF1	100	99.844	Macaca_fascicularis
ENSJJAG00000011788	Sf1	100	99.687	ENSMMUG00000022606	SF1	100	99.841	Macaca_mulatta
ENSJJAG00000011788	Sf1	100	99.844	ENSMNEG00000037901	SF1	100	99.844	Macaca_nemestrina
ENSJJAG00000011788	Sf1	98	99.841	ENSMLEG00000040706	SF1	95	99.841	Mandrillus_leucophaeus
ENSJJAG00000011788	Sf1	59	81.606	ENSMAMG00000001780	sf1	58	78.208	Mastacembelus_armatus
ENSJJAG00000011788	Sf1	58	82.895	ENSMZEG00005009196	sf1	61	77.262	Maylandia_zebra
ENSJJAG00000011788	Sf1	100	99.530	ENSMAUG00000014064	Sf1	100	99.530	Mesocricetus_auratus
ENSJJAG00000011788	Sf1	100	99.687	ENSMICG00000001202	SF1	100	99.687	Microcebus_murinus
ENSJJAG00000011788	Sf1	100	99.530	ENSMOCG00000022038	Sf1	100	99.530	Microtus_ochrogaster
ENSJJAG00000011788	Sf1	58	81.989	ENSMMOG00000020474	sf1	60	76.642	Mola_mola
ENSJJAG00000011788	Sf1	70	94.631	ENSMODG00000029407	SF1	97	94.631	Monodelphis_domestica
ENSJJAG00000011788	Sf1	100	99.531	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSJJAG00000011788	Sf1	100	99.531	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSJJAG00000011788	Sf1	100	99.531	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSJJAG00000011788	Sf1	100	99.531	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSJJAG00000011788	Sf1	100	98.592	ENSMPUG00000012684	SF1	100	98.592	Mustela_putorius_furo
ENSJJAG00000011788	Sf1	72	94.311	ENSMLUG00000029800	-	78	94.714	Myotis_lucifugus
ENSJJAG00000011788	Sf1	99	99.525	ENSMLUG00000015217	-	99	99.525	Myotis_lucifugus
ENSJJAG00000011788	Sf1	100	99.687	ENSNGAG00000005550	Sf1	100	99.687	Nannospalax_galili
ENSJJAG00000011788	Sf1	58	83.957	ENSNBRG00000017606	sf1	60	79.805	Neolamprologus_brichardi
ENSJJAG00000011788	Sf1	100	99.687	ENSNLEG00000005236	-	100	99.687	Nomascus_leucogenys
ENSJJAG00000011788	Sf1	80	98.441	ENSMEUG00000013424	SF1	97	98.441	Notamacropus_eugenii
ENSJJAG00000011788	Sf1	74	98.947	ENSOPRG00000005008	SF1	96	98.947	Ochotona_princeps
ENSJJAG00000011788	Sf1	100	89.368	ENSODEG00000006102	-	100	87.519	Octodon_degus
ENSJJAG00000011788	Sf1	58	82.632	ENSONIG00000015728	sf1	61	77.030	Oreochromis_niloticus
ENSJJAG00000011788	Sf1	63	85.714	ENSOANG00000002909	SF1	96	87.468	Ornithorhynchus_anatinus
ENSJJAG00000011788	Sf1	99	99.524	ENSOCUG00000026486	SF1	100	99.524	Oryctolagus_cuniculus
ENSJJAG00000011788	Sf1	60	80.818	ENSORLG00000011853	sf1	58	76.978	Oryzias_latipes
ENSJJAG00000011788	Sf1	61	79.500	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSJJAG00000011788	Sf1	58	80.628	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSJJAG00000011788	Sf1	60	79.795	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSJJAG00000011788	Sf1	100	99.530	ENSOGAG00000016196	SF1	100	99.530	Otolemur_garnettii
ENSJJAG00000011788	Sf1	83	94.946	ENSOARG00000009166	SF1	82	99.786	Ovis_aries
ENSJJAG00000011788	Sf1	96	99.837	ENSPPAG00000002799	-	100	99.837	Pan_paniscus
ENSJJAG00000011788	Sf1	98	99.681	ENSPPRG00000013566	SF1	100	99.837	Panthera_pardus
ENSJJAG00000011788	Sf1	70	98.652	ENSPTIG00000016141	SF1	80	98.652	Panthera_tigris_altaica
ENSJJAG00000011788	Sf1	100	99.687	ENSPTRG00000003846	SF1	100	99.687	Pan_troglodytes
ENSJJAG00000011788	Sf1	100	95.593	ENSPANG00000020754	SF1	97	99.433	Papio_anubis
ENSJJAG00000011788	Sf1	51	79.580	ENSPKIG00000012116	sf1	88	74.212	Paramormyrops_kingsleyae
ENSJJAG00000011788	Sf1	55	87.464	ENSPSIG00000003610	SF1	97	75.686	Pelodiscus_sinensis
ENSJJAG00000011788	Sf1	100	99.687	ENSPEMG00000010463	Sf1	100	99.687	Peromyscus_maniculatus_bairdii
ENSJJAG00000011788	Sf1	100	99.061	ENSPCIG00000018173	SF1	100	99.061	Phascolarctos_cinereus
ENSJJAG00000011788	Sf1	59	86.016	ENSPFOG00000013683	sf1	68	81.384	Poecilia_formosa
ENSJJAG00000011788	Sf1	58	84.127	ENSPLAG00000018076	sf1	61	79.426	Poecilia_latipinna
ENSJJAG00000011788	Sf1	58	84.127	ENSPMEG00000005726	sf1	62	79.665	Poecilia_mexicana
ENSJJAG00000011788	Sf1	58	83.202	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSJJAG00000011788	Sf1	100	99.530	ENSPPYG00000003098	-	100	99.530	Pongo_abelii
ENSJJAG00000011788	Sf1	82	97.719	ENSPCAG00000013631	SF1	78	97.719	Procavia_capensis
ENSJJAG00000011788	Sf1	100	99.687	ENSPCOG00000027546	SF1	100	99.687	Propithecus_coquereli
ENSJJAG00000011788	Sf1	82	97.719	ENSPVAG00000016938	SF1	79	97.719	Pteropus_vampyrus
ENSJJAG00000011788	Sf1	58	82.895	ENSPNYG00000004673	sf1	59	78.436	Pundamilia_nyererei
ENSJJAG00000011788	Sf1	58	85.714	ENSPNAG00000013072	sf1	59	78.846	Pygocentrus_nattereri
ENSJJAG00000011788	Sf1	100	99.531	ENSRNOG00000021085	Sf1	100	99.531	Rattus_norvegicus
ENSJJAG00000011788	Sf1	100	95.775	ENSRBIG00000042818	SF1	100	95.775	Rhinopithecus_bieti
ENSJJAG00000011788	Sf1	100	86.159	ENSRROG00000045655	SF1	98	98.235	Rhinopithecus_roxellana
ENSJJAG00000011788	Sf1	97	80.257	ENSSBOG00000022267	-	99	81.490	Saimiri_boliviensis_boliviensis
ENSJJAG00000011788	Sf1	63	92.195	ENSSHAG00000006841	SF1	75	93.415	Sarcophilus_harrisii
ENSJJAG00000011788	Sf1	62	80.798	ENSSFOG00015021978	sf1	55	77.053	Scleropages_formosus
ENSJJAG00000011788	Sf1	64	76.347	ENSSMAG00000007549	sf1	63	76.761	Scophthalmus_maximus
ENSJJAG00000011788	Sf1	59	80.206	ENSSDUG00000003903	sf1	63	76.636	Seriola_dumerili
ENSJJAG00000011788	Sf1	81	95.551	ENSSARG00000008180	SF1	100	95.551	Sorex_araneus
ENSJJAG00000011788	Sf1	79	82.950	ENSSPUG00000012907	SF1	86	81.418	Sphenodon_punctatus
ENSJJAG00000011788	Sf1	59	80.412	ENSSPAG00000019060	sf1	61	76.112	Stegastes_partitus
ENSJJAG00000011788	Sf1	100	99.687	ENSSSCG00000013021	SF1	100	99.687	Sus_scrofa
ENSJJAG00000011788	Sf1	84	62.983	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSJJAG00000011788	Sf1	96	84.967	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSJJAG00000011788	Sf1	81	94.981	ENSTTRG00000008857	SF1	96	95.349	Tursiops_truncatus
ENSJJAG00000011788	Sf1	82	96.947	ENSUAMG00000011977	SF1	100	96.947	Ursus_americanus
ENSJJAG00000011788	Sf1	82	97.391	ENSUMAG00000007268	SF1	89	100.000	Ursus_maritimus
ENSJJAG00000011788	Sf1	56	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSJJAG00000011788	Sf1	83	99.433	ENSVVUG00000028585	SF1	97	99.433	Vulpes_vulpes
ENSJJAG00000011788	Sf1	97	69.545	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSJJAG00000011788	Sf1	57	85.479	ENSXCOG00000003704	sf1	75	81.188	Xiphophorus_couchianus
ENSJJAG00000011788	Sf1	58	83.641	ENSXMAG00000007822	sf1	61	79.665	Xiphophorus_maculatus