EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000011960 (Gene tree)
Gene ID: -
Gene Symbol: Pabpc5
Alias: -
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 657 bases
Position: chrJH725531.1:7397231-7397887
Accession: 101609606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000007578	RRM_1	PF00076.22	3.9e-43	1	2
ENSJJAP00000007578	RRM_1	PF00076.22	3.9e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000013995	-	657	XM_004666750	ENSJJAP00000007578	218 (aa)	XP_004666807	-

Gene Model

Click here to download ENSJJAG00000011960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000011960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000011960	Pabpc5	99	57.209	ENSJJAG00000014258	Pabpc2	59	57.209
ENSJJAG00000011960	Pabpc5	98	59.624	ENSJJAG00000004090	Pabpc4l	97	59.624
ENSJJAG00000011960	Pabpc5	85	38.667	ENSJJAG00000015428	-	54	38.667
ENSJJAG00000011960	Pabpc5	99	61.972	ENSJJAG00000015918	Pabpc1	58	61.972
ENSJJAG00000011960	Pabpc5	80	39.286	ENSJJAG00000007037	-	86	38.554
ENSJJAG00000011960	Pabpc5	99	56.808	ENSJJAG00000022406	Pabpc1l	56	56.808
ENSJJAG00000011960	Pabpc5	78	33.333	ENSJJAG00000000423	-	60	33.333
ENSJJAG00000011960	Pabpc5	99	52.113	ENSJJAG00000019230	Pabpc6	67	50.235
ENSJJAG00000011960	Pabpc5	74	30.952	ENSJJAG00000024047	-	53	30.952
ENSJJAG00000011960	Pabpc5	99	65.258	ENSJJAG00000007781	Pabpc4	57	65.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000011960	Pabpc5	100	96.330	ENSG00000174740	PABPC5	100	96.330	Homo_sapiens
ENSJJAG00000011960	Pabpc5	99	96.774	ENSAMEG00000020114	PABPC5	95	96.774	Ailuropoda_melanoleuca
ENSJJAG00000011960	Pabpc5	99	96.774	ENSANAG00000005063	PABPC5	95	96.774	Aotus_nancymaae
ENSJJAG00000011960	Pabpc5	100	96.330	ENSBTAG00000019942	PABPC5	95	96.330	Bos_taurus
ENSJJAG00000011960	Pabpc5	99	95.853	ENSCJAG00000003665	PABPC5	95	95.853	Callithrix_jacchus
ENSJJAG00000011960	Pabpc5	100	95.413	ENSCAFG00000017452	PABPC5	95	95.413	Canis_familiaris
ENSJJAG00000011960	Pabpc5	100	95.872	ENSCHIG00000019004	PABPC5	95	95.872	Capra_hircus
ENSJJAG00000011960	Pabpc5	100	96.330	ENSTSYG00000036351	PABPC5	95	96.330	Carlito_syrichta
ENSJJAG00000011960	Pabpc5	100	88.542	ENSCAPG00000010714	PABPC5	80	88.542	Cavia_aperea
ENSJJAG00000011960	Pabpc5	100	92.202	ENSCPOG00000002555	PABPC5	95	92.202	Cavia_porcellus
ENSJJAG00000011960	Pabpc5	99	96.774	ENSCCAG00000032154	PABPC5	95	96.774	Cebus_capucinus
ENSJJAG00000011960	Pabpc5	99	97.235	ENSCATG00000043083	PABPC5	95	97.235	Cercocebus_atys
ENSJJAG00000011960	Pabpc5	100	94.495	ENSCLAG00000000647	PABPC5	95	94.495	Chinchilla_lanigera
ENSJJAG00000011960	Pabpc5	99	97.235	ENSCSAG00000000065	PABPC5	95	97.235	Chlorocebus_sabaeus
ENSJJAG00000011960	Pabpc5	99	97.235	ENSCANG00000011473	PABPC5	95	97.235	Colobus_angolensis_palliatus
ENSJJAG00000011960	Pabpc5	100	93.578	ENSCGRG00000018699	Pabpc5	95	93.578	Cricetulus_griseus_crigri
ENSJJAG00000011960	Pabpc5	100	92.574	ENSETEG00000011832	PABPC5	53	92.574	Echinops_telfairi
ENSJJAG00000011960	Pabpc5	100	96.330	ENSEASG00005014396	PABPC5	95	96.330	Equus_asinus_asinus
ENSJJAG00000011960	Pabpc5	100	96.330	ENSECAG00000003452	PABPC5	95	96.330	Equus_caballus
ENSJJAG00000011960	Pabpc5	100	95.872	ENSFCAG00000004998	PABPC5	95	95.872	Felis_catus
ENSJJAG00000011960	Pabpc5	100	95.413	ENSFDAG00000000126	PABPC5	95	95.413	Fukomys_damarensis
ENSJJAG00000011960	Pabpc5	99	96.774	ENSGGOG00000007622	PABPC5	95	96.774	Gorilla_gorilla
ENSJJAG00000011960	Pabpc5	99	97.235	ENSMFAG00000024561	PABPC5	95	97.235	Macaca_fascicularis
ENSJJAG00000011960	Pabpc5	99	97.235	ENSMMUG00000011562	PABPC5	95	97.235	Macaca_mulatta
ENSJJAG00000011960	Pabpc5	99	97.235	ENSMNEG00000037604	PABPC5	95	97.235	Macaca_nemestrina
ENSJJAG00000011960	Pabpc5	99	97.235	ENSMLEG00000028318	PABPC5	95	97.235	Mandrillus_leucophaeus
ENSJJAG00000011960	Pabpc5	100	94.954	ENSMICG00000041706	PABPC5	95	94.954	Microcebus_murinus
ENSJJAG00000011960	Pabpc5	100	95.413	ENSMOCG00000001554	Pabpc5	95	95.413	Microtus_ochrogaster
ENSJJAG00000011960	Pabpc5	100	90.826	MGP_CAROLIEiJ_G0033367	Pabpc5	95	90.826	Mus_caroli
ENSJJAG00000011960	Pabpc5	100	91.743	ENSMUSG00000034732	Pabpc5	95	91.743	Mus_musculus
ENSJJAG00000011960	Pabpc5	100	92.202	MGP_PahariEiJ_G0031908	Pabpc5	95	92.202	Mus_pahari
ENSJJAG00000011960	Pabpc5	100	91.743	MGP_SPRETEiJ_G0034533	Pabpc5	95	91.743	Mus_spretus
ENSJJAG00000011960	Pabpc5	100	94.954	ENSMPUG00000018465	PABPC5	95	94.954	Mustela_putorius_furo
ENSJJAG00000011960	Pabpc5	100	94.037	ENSMLUG00000008244	PABPC5	95	94.037	Myotis_lucifugus
ENSJJAG00000011960	Pabpc5	100	97.248	ENSNGAG00000004371	Pabpc5	100	97.248	Nannospalax_galili
ENSJJAG00000011960	Pabpc5	99	96.774	ENSNLEG00000035086	PABPC5	95	96.774	Nomascus_leucogenys
ENSJJAG00000011960	Pabpc5	96	98.246	ENSOPRG00000000856	PABPC5	91	98.246	Ochotona_princeps
ENSJJAG00000011960	Pabpc5	100	97.248	ENSOCUG00000010919	PABPC5	95	97.248	Oryctolagus_cuniculus
ENSJJAG00000011960	Pabpc5	100	96.330	ENSOGAG00000006882	PABPC5	95	96.330	Otolemur_garnettii
ENSJJAG00000011960	Pabpc5	100	96.330	ENSOARG00000010260	PABPC5	95	96.330	Ovis_aries
ENSJJAG00000011960	Pabpc5	99	96.313	ENSPPAG00000007378	PABPC5	95	96.313	Pan_paniscus
ENSJJAG00000011960	Pabpc5	100	95.872	ENSPPRG00000010742	PABPC5	95	95.872	Panthera_pardus
ENSJJAG00000011960	Pabpc5	100	95.872	ENSPTIG00000001480	PABPC5	95	95.872	Panthera_tigris_altaica
ENSJJAG00000011960	Pabpc5	99	96.774	ENSPTRG00000022078	PABPC5	95	96.774	Pan_troglodytes
ENSJJAG00000011960	Pabpc5	99	97.235	ENSPANG00000018282	PABPC5	95	97.235	Papio_anubis
ENSJJAG00000011960	Pabpc5	100	94.495	ENSPEMG00000000171	Pabpc5	95	94.495	Peromyscus_maniculatus_bairdii
ENSJJAG00000011960	Pabpc5	99	96.774	ENSPPYG00000020526	PABPC5	95	96.774	Pongo_abelii
ENSJJAG00000011960	Pabpc5	98	96.396	ENSPCAG00000015577	PABPC5	93	96.396	Procavia_capensis
ENSJJAG00000011960	Pabpc5	100	96.330	ENSPCOG00000000676	PABPC5	95	96.330	Propithecus_coquereli
ENSJJAG00000011960	Pabpc5	100	95.872	ENSPVAG00000006465	PABPC5	95	95.872	Pteropus_vampyrus
ENSJJAG00000011960	Pabpc5	100	92.661	ENSRNOG00000003354	Pabpc5	95	92.661	Rattus_norvegicus
ENSJJAG00000011960	Pabpc5	99	97.235	ENSRBIG00000011760	PABPC5	95	97.235	Rhinopithecus_bieti
ENSJJAG00000011960	Pabpc5	99	97.235	ENSRROG00000036708	PABPC5	95	97.235	Rhinopithecus_roxellana
ENSJJAG00000011960	Pabpc5	99	96.313	ENSSBOG00000008658	PABPC5	95	96.313	Saimiri_boliviensis_boliviensis
ENSJJAG00000011960	Pabpc5	100	93.119	ENSSARG00000014012	PABPC5	95	93.119	Sorex_araneus
ENSJJAG00000011960	Pabpc5	100	96.330	ENSSSCG00000040194	PABPC5	95	96.330	Sus_scrofa
ENSJJAG00000011960	Pabpc5	100	98.165	ENSTBEG00000016482	PABPC5	95	98.165	Tupaia_belangeri
ENSJJAG00000011960	Pabpc5	100	95.872	ENSUAMG00000013627	PABPC5	95	95.872	Ursus_americanus
ENSJJAG00000011960	Pabpc5	100	95.413	ENSUMAG00000023934	PABPC5	95	95.413	Ursus_maritimus
ENSJJAG00000011960	Pabpc5	100	95.413	ENSVPAG00000001063	PABPC5	95	95.413	Vicugna_pacos
ENSJJAG00000011960	Pabpc5	100	95.872	ENSVVUG00000013172	PABPC5	95	95.872	Vulpes_vulpes