EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000011978 (Gene tree)
Gene ID: 101604055
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4B pseudogene
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 489 bases
Position: chrJH725628.1:1397108-1397596
Accession: 101604055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000007602	RRM_5	PF13893.6	7.7e-07	1	1
ENSJJAP00000007602	RRM_1	PF00076.22	3.2e-35	1	2
ENSJJAP00000007602	RRM_1	PF00076.22	3.2e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000014019	-	489	-	ENSJJAP00000007602	162 (aa)	-	UPI0003331C77

Gene Model

Click here to download ENSJJAG00000011978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000011978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000011978	-	90	76.712	ENSJJAG00000014755	-	93	81.507
ENSJJAG00000011978	-	94	81.579	ENSJJAG00000003168	-	99	81.579
ENSJJAG00000011978	-	88	95.804	ENSJJAG00000020814	Rbm14	100	95.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000011978	-	84	78.832	ENSANAG00000033951	-	100	78.832	Aotus_nancymaae
ENSJJAG00000011978	-	100	93.827	ENSTSYG00000036089	-	99	93.827	Carlito_syrichta
ENSJJAG00000011978	-	89	77.778	ENSTSYG00000035012	-	96	77.778	Carlito_syrichta
ENSJJAG00000011978	-	87	80.142	ENSCCAG00000029710	-	96	81.022	Cebus_capucinus
ENSJJAG00000011978	-	84	76.471	ENSCCAG00000024345	-	100	76.471	Cebus_capucinus
ENSJJAG00000011978	-	88	72.028	ENSCCAG00000021719	-	100	72.028	Cebus_capucinus
ENSJJAG00000011978	-	100	74.847	ENSCANG00000043380	-	95	74.847	Colobus_angolensis_palliatus
ENSJJAG00000011978	-	96	72.436	ENSGGOG00000025398	-	98	77.857	Gorilla_gorilla
ENSJJAG00000011978	-	86	78.571	ENSHGLG00000003890	-	96	78.571	Heterocephalus_glaber_female
ENSJJAG00000011978	-	90	91.724	ENSHGLG00000007708	-	99	91.724	Heterocephalus_glaber_female
ENSJJAG00000011978	-	87	86.525	ENSHGLG00100011767	-	77	88.321	Heterocephalus_glaber_male
ENSJJAG00000011978	-	90	91.724	ENSHGLG00100011999	-	99	91.724	Heterocephalus_glaber_male
ENSJJAG00000011978	-	87	92.199	ENSHGLG00100012753	-	89	92.199	Heterocephalus_glaber_male
ENSJJAG00000011978	-	87	81.560	ENSMFAG00000041731	-	60	81.560	Macaca_fascicularis
ENSJJAG00000011978	-	86	99.281	ENSMMUG00000010577	-	94	100.000	Macaca_mulatta
ENSJJAG00000011978	-	87	81.560	ENSMNEG00000036946	-	60	81.560	Macaca_nemestrina
ENSJJAG00000011978	-	87	81.560	ENSMLEG00000038589	-	60	81.560	Mandrillus_leucophaeus
ENSJJAG00000011978	-	86	100.000	ENSNGAG00000012575	-	100	100.000	Nannospalax_galili
ENSJJAG00000011978	-	89	79.592	ENSPANG00000018676	-	95	79.592	Papio_anubis
ENSJJAG00000011978	-	100	74.847	ENSRBIG00000035855	-	98	74.847	Rhinopithecus_bieti
ENSJJAG00000011978	-	100	74.847	ENSRROG00000038956	-	98	74.847	Rhinopithecus_roxellana
ENSJJAG00000011978	-	88	74.306	ENSSBOG00000025871	-	100	74.306	Saimiri_boliviensis_boliviensis
ENSJJAG00000011978	-	88	90.210	ENSSPUG00000005889	-	95	90.210	Sphenodon_punctatus
ENSJJAG00000011978	-	86	98.571	ENSUMAG00000011745	-	63	98.571	Ursus_maritimus