EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000012033 (Gene tree)
Gene ID: 101594412
Gene Symbol: -
Alias: -
Full Name: ribosome maturation protein SBDS
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 753 bases
Position: chrJH725522.1:4175353-4176105
Accession: 101594412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000007682	SBDS	PF01172.18	1e-31	1	1
ENSJJAP00000007682	SBDS_C	PF09377.10	7.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000014100	-	753	XM_004665877	ENSJJAP00000007682	250 (aa)	XP_004665934	UPI0003334932

Gene Model

Click here to download ENSJJAG00000012033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000012033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000012033	-	100	69.170	ENSJJAG00000003934	-	100	69.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000012033	-	100	94.400	ENSG00000126524	SBDS	100	94.400	Homo_sapiens
ENSJJAG00000012033	-	99	81.377	ENSAPOG00000014285	sbds	99	81.377	Acanthochromis_polyacanthus
ENSJJAG00000012033	-	100	93.200	ENSAMEG00000018167	SBDS	100	93.200	Ailuropoda_melanoleuca
ENSJJAG00000012033	-	99	81.200	ENSACIG00000007308	sbds	99	81.200	Amphilophus_citrinellus
ENSJJAG00000012033	-	99	81.377	ENSAOCG00000016770	sbds	99	81.377	Amphiprion_ocellaris
ENSJJAG00000012033	-	99	81.781	ENSAPEG00000015897	sbds	99	81.781	Amphiprion_percula
ENSJJAG00000012033	-	99	81.124	ENSATEG00000006901	sbds	100	81.124	Anabas_testudineus
ENSJJAG00000012033	-	92	87.879	ENSANAG00000024342	-	97	87.879	Aotus_nancymaae
ENSJJAG00000012033	-	83	94.686	ENSANAG00000037501	-	100	94.686	Aotus_nancymaae
ENSJJAG00000012033	-	99	82.591	ENSACLG00000018750	sbds	99	82.591	Astatotilapia_calliptera
ENSJJAG00000012033	-	100	82.800	ENSAMXG00000005361	sbds	100	82.800	Astyanax_mexicanus
ENSJJAG00000012033	-	100	94.800	ENSBTAG00000004051	SBDS	100	94.800	Bos_taurus
ENSJJAG00000012033	-	98	57.143	WBGene00021063	sbds-1	97	57.143	Caenorhabditis_elegans
ENSJJAG00000012033	-	100	94.000	ENSCJAG00000041007	SBDS	100	94.000	Callithrix_jacchus
ENSJJAG00000012033	-	100	91.667	ENSCAFG00000010797	SBDS	100	91.667	Canis_familiaris
ENSJJAG00000012033	-	100	93.600	ENSCAFG00020005357	SBDS	100	93.600	Canis_lupus_dingo
ENSJJAG00000012033	-	100	94.800	ENSCHIG00000026854	SBDS	100	94.800	Capra_hircus
ENSJJAG00000012033	-	100	94.400	ENSTSYG00000033822	SBDS	100	94.400	Carlito_syrichta
ENSJJAG00000012033	-	66	93.902	ENSCAPG00000006634	SBDS	100	93.902	Cavia_aperea
ENSJJAG00000012033	-	100	94.400	ENSCPOG00000036143	SBDS	100	94.400	Cavia_porcellus
ENSJJAG00000012033	-	100	94.000	ENSCCAG00000020671	SBDS	100	94.000	Cebus_capucinus
ENSJJAG00000012033	-	100	94.400	ENSCATG00000039026	SBDS	100	94.400	Cercocebus_atys
ENSJJAG00000012033	-	100	94.000	ENSCLAG00000005721	-	100	94.000	Chinchilla_lanigera
ENSJJAG00000012033	-	99	68.548	ENSCLAG00000002113	-	99	68.548	Chinchilla_lanigera
ENSJJAG00000012033	-	100	94.400	ENSCSAG00000018275	SBDS	100	94.400	Chlorocebus_sabaeus
ENSJJAG00000012033	-	100	89.200	ENSCHOG00000003795	SBDS	100	89.200	Choloepus_hoffmanni
ENSJJAG00000012033	-	100	86.400	ENSCPBG00000014893	SBDS	100	86.400	Chrysemys_picta_bellii
ENSJJAG00000012033	-	99	66.800	ENSCSAVG00000011811	-	100	66.800	Ciona_savignyi
ENSJJAG00000012033	-	100	94.000	ENSCANG00000032368	SBDS	100	94.000	Colobus_angolensis_palliatus
ENSJJAG00000012033	-	66	92.683	ENSCGRG00001019886	Sbds	100	92.683	Cricetulus_griseus_chok1gshd
ENSJJAG00000012033	-	83	94.203	ENSCGRG00000009211	Sbds	100	94.203	Cricetulus_griseus_crigri
ENSJJAG00000012033	-	99	79.920	ENSCSEG00000005798	sbds	100	79.920	Cynoglossus_semilaevis
ENSJJAG00000012033	-	99	79.518	ENSCVAG00000001053	sbds	99	80.162	Cyprinodon_variegatus
ENSJJAG00000012033	-	100	81.600	ENSDARG00000027803	sbds	100	81.600	Danio_rerio
ENSJJAG00000012033	-	100	93.200	ENSDNOG00000041174	SBDS	100	93.200	Dasypus_novemcinctus
ENSJJAG00000012033	-	100	92.800	ENSDORG00000026218	Sbds	100	92.800	Dipodomys_ordii
ENSJJAG00000012033	-	90	58.333	FBgn0035714	CG8549	99	58.635	Drosophila_melanogaster
ENSJJAG00000012033	-	83	65.217	ENSEBUG00000015780	sbds	92	65.217	Eptatretus_burgeri
ENSJJAG00000012033	-	100	94.000	ENSEASG00005008821	SBDS	100	94.000	Equus_asinus_asinus
ENSJJAG00000012033	-	100	94.000	ENSECAG00000008202	SBDS	100	94.000	Equus_caballus
ENSJJAG00000012033	-	83	71.635	ENSEEUG00000004768	SBDS	100	71.635	Erinaceus_europaeus
ENSJJAG00000012033	-	100	80.000	ENSELUG00000008382	sbds	100	80.000	Esox_lucius
ENSJJAG00000012033	-	100	93.600	ENSFCAG00000022142	SBDS	100	93.600	Felis_catus
ENSJJAG00000012033	-	100	86.400	ENSFALG00000013808	SBDS	100	86.400	Ficedula_albicollis
ENSJJAG00000012033	-	100	94.400	ENSFDAG00000018947	-	100	94.400	Fukomys_damarensis
ENSJJAG00000012033	-	99	77.108	ENSFHEG00000000708	sbds	100	77.108	Fundulus_heteroclitus
ENSJJAG00000012033	-	100	81.200	ENSGMOG00000018356	sbds	99	81.200	Gadus_morhua
ENSJJAG00000012033	-	100	86.000	ENSGALG00000027989	SBDS	100	86.000	Gallus_gallus
ENSJJAG00000012033	-	92	76.957	ENSGAFG00000014204	sbds	100	76.957	Gambusia_affinis
ENSJJAG00000012033	-	99	79.920	ENSGACG00000012697	sbds	100	79.920	Gasterosteus_aculeatus
ENSJJAG00000012033	-	86	87.383	ENSGAGG00000022402	SBDS	100	87.383	Gopherus_agassizii
ENSJJAG00000012033	-	96	74.274	ENSGGOG00000040023	-	92	74.274	Gorilla_gorilla
ENSJJAG00000012033	-	99	82.591	ENSHBUG00000002660	sbds	99	82.591	Haplochromis_burtoni
ENSJJAG00000012033	-	100	92.800	ENSHGLG00000009671	SBDS	100	92.800	Heterocephalus_glaber_female
ENSJJAG00000012033	-	100	92.800	ENSHGLG00100011332	SBDS	100	92.800	Heterocephalus_glaber_male
ENSJJAG00000012033	-	99	78.313	ENSHCOG00000018606	sbds	100	78.313	Hippocampus_comes
ENSJJAG00000012033	-	100	82.400	ENSIPUG00000006536	sbds	100	82.400	Ictalurus_punctatus
ENSJJAG00000012033	-	99	81.781	ENSKMAG00000018542	sbds	99	81.781	Kryptolebias_marmoratus
ENSJJAG00000012033	-	99	78.947	ENSLBEG00000016687	sbds	99	78.947	Labrus_bergylta
ENSJJAG00000012033	-	100	68.110	ENSLACG00000018916	SBDS	100	68.110	Latimeria_chalumnae
ENSJJAG00000012033	-	100	84.400	ENSLOCG00000004073	sbds	100	84.400	Lepisosteus_oculatus
ENSJJAG00000012033	-	100	92.400	ENSLAFG00000008763	SBDS	100	92.400	Loxodonta_africana
ENSJJAG00000012033	-	100	94.400	ENSMFAG00000032620	SBDS	100	94.400	Macaca_fascicularis
ENSJJAG00000012033	-	100	94.400	ENSMMUG00000045653	SBDS	100	94.400	Macaca_mulatta
ENSJJAG00000012033	-	100	94.400	ENSMNEG00000031523	SBDS	100	94.400	Macaca_nemestrina
ENSJJAG00000012033	-	100	72.441	ENSMLEG00000036826	SBDS	100	72.441	Mandrillus_leucophaeus
ENSJJAG00000012033	-	99	81.377	ENSMAMG00000016062	sbds	99	81.377	Mastacembelus_armatus
ENSJJAG00000012033	-	99	82.591	ENSMZEG00005024385	sbds	99	82.591	Maylandia_zebra
ENSJJAG00000012033	-	100	86.000	ENSMGAG00000002119	SBDS	100	86.000	Meleagris_gallopavo
ENSJJAG00000012033	-	99	75.709	ENSMAUG00000022214	-	99	75.709	Mesocricetus_auratus
ENSJJAG00000012033	-	100	94.400	ENSMICG00000014366	SBDS	100	94.400	Microcebus_murinus
ENSJJAG00000012033	-	100	94.400	ENSMOCG00000011739	Sbds	100	94.400	Microtus_ochrogaster
ENSJJAG00000012033	-	99	71.774	ENSMMOG00000005061	sbds	99	71.888	Mola_mola
ENSJJAG00000012033	-	100	94.000	ENSMODG00000006644	SBDS	100	94.000	Monodelphis_domestica
ENSJJAG00000012033	-	99	81.377	ENSMALG00000010219	sbds	99	81.377	Monopterus_albus
ENSJJAG00000012033	-	100	94.400	MGP_CAROLIEiJ_G0027800	Sbds	100	94.400	Mus_caroli
ENSJJAG00000012033	-	100	94.000	ENSMUSG00000025337	Sbds	100	94.000	Mus_musculus
ENSJJAG00000012033	-	100	94.000	MGP_PahariEiJ_G0024384	Sbds	100	94.000	Mus_pahari
ENSJJAG00000012033	-	100	94.000	MGP_SPRETEiJ_G0028798	Sbds	100	94.000	Mus_spretus
ENSJJAG00000012033	-	67	90.476	ENSMPUG00000016192	SBDS	97	90.476	Mustela_putorius_furo
ENSJJAG00000012033	-	73	92.857	ENSMLUG00000013575	SBDS	100	92.857	Myotis_lucifugus
ENSJJAG00000012033	-	100	94.400	ENSNGAG00000012093	Sbds	100	94.400	Nannospalax_galili
ENSJJAG00000012033	-	99	82.591	ENSNBRG00000017027	sbds	99	82.591	Neolamprologus_brichardi
ENSJJAG00000012033	-	100	94.400	ENSNLEG00000013288	SBDS	100	94.400	Nomascus_leucogenys
ENSJJAG00000012033	-	100	92.000	ENSOPRG00000008721	SBDS	100	92.000	Ochotona_princeps
ENSJJAG00000012033	-	98	75.510	ENSODEG00000001116	-	98	75.510	Octodon_degus
ENSJJAG00000012033	-	100	85.200	ENSODEG00000019253	-	84	85.200	Octodon_degus
ENSJJAG00000012033	-	99	72.470	ENSODEG00000000137	-	83	74.089	Octodon_degus
ENSJJAG00000012033	-	99	81.781	ENSONIG00000005874	sbds	99	81.781	Oreochromis_niloticus
ENSJJAG00000012033	-	83	90.821	ENSOANG00000007674	-	100	90.821	Ornithorhynchus_anatinus
ENSJJAG00000012033	-	100	93.600	ENSOCUG00000003170	SBDS	100	93.600	Oryctolagus_cuniculus
ENSJJAG00000012033	-	99	78.947	ENSORLG00000023489	sbds	99	78.947	Oryzias_latipes
ENSJJAG00000012033	-	99	78.543	ENSORLG00020019282	sbds	99	78.543	Oryzias_latipes_hni
ENSJJAG00000012033	-	99	78.543	ENSORLG00015008005	sbds	99	78.543	Oryzias_latipes_hsok
ENSJJAG00000012033	-	99	79.352	ENSOMEG00000022747	sbds	99	79.352	Oryzias_melastigma
ENSJJAG00000012033	-	99	78.629	ENSOGAG00000015036	-	99	78.629	Otolemur_garnettii
ENSJJAG00000012033	-	100	93.600	ENSOGAG00000009011	-	100	93.600	Otolemur_garnettii
ENSJJAG00000012033	-	100	94.800	ENSOARG00000010609	SBDS	100	94.800	Ovis_aries
ENSJJAG00000012033	-	100	93.600	ENSPPAG00000043889	-	100	93.600	Pan_paniscus
ENSJJAG00000012033	-	100	93.600	ENSPPRG00000002307	SBDS	100	93.600	Panthera_pardus
ENSJJAG00000012033	-	100	93.600	ENSPTIG00000021308	SBDS	100	93.600	Panthera_tigris_altaica
ENSJJAG00000012033	-	100	94.400	ENSPTRG00000019254	SBDS	100	94.400	Pan_troglodytes
ENSJJAG00000012033	-	100	79.600	ENSPTRG00000047744	-	100	79.600	Pan_troglodytes
ENSJJAG00000012033	-	100	80.000	ENSPTRG00000050835	-	100	80.000	Pan_troglodytes
ENSJJAG00000012033	-	87	92.166	ENSPTRG00000048174	-	96	92.166	Pan_troglodytes
ENSJJAG00000012033	-	100	94.000	ENSPANG00000004078	SBDS	100	94.000	Papio_anubis
ENSJJAG00000012033	-	100	82.800	ENSPKIG00000006489	sbds	100	82.800	Paramormyrops_kingsleyae
ENSJJAG00000012033	-	83	88.406	ENSPSIG00000014603	SBDS	99	88.406	Pelodiscus_sinensis
ENSJJAG00000012033	-	99	80.567	ENSPMGG00000004246	sbds	99	80.567	Periophthalmus_magnuspinnatus
ENSJJAG00000012033	-	100	94.000	ENSPEMG00000008728	Sbds	100	94.000	Peromyscus_maniculatus_bairdii
ENSJJAG00000012033	-	100	93.200	ENSPCIG00000029718	SBDS	100	93.200	Phascolarctos_cinereus
ENSJJAG00000012033	-	99	79.352	ENSPFOG00000015837	sbds	99	79.352	Poecilia_formosa
ENSJJAG00000012033	-	99	79.352	ENSPLAG00000003641	sbds	99	79.352	Poecilia_latipinna
ENSJJAG00000012033	-	99	79.352	ENSPMEG00000019483	sbds	99	79.352	Poecilia_mexicana
ENSJJAG00000012033	-	99	78.947	ENSPREG00000018758	sbds	99	78.947	Poecilia_reticulata
ENSJJAG00000012033	-	100	94.400	ENSPPYG00000017513	SBDS	100	94.400	Pongo_abelii
ENSJJAG00000012033	-	100	94.000	ENSPCOG00000021098	SBDS	100	94.000	Propithecus_coquereli
ENSJJAG00000012033	-	100	93.600	ENSPVAG00000009369	SBDS	100	93.600	Pteropus_vampyrus
ENSJJAG00000012033	-	99	82.186	ENSPNYG00000022403	sbds	99	82.186	Pundamilia_nyererei
ENSJJAG00000012033	-	100	82.800	ENSPNAG00000001120	sbds	100	82.800	Pygocentrus_nattereri
ENSJJAG00000012033	-	100	94.000	ENSRNOG00000000888	Sbds	100	94.000	Rattus_norvegicus
ENSJJAG00000012033	-	100	94.400	ENSRBIG00000035557	SBDS	100	94.805	Rhinopithecus_bieti
ENSJJAG00000012033	-	100	76.400	ENSRROG00000041986	-	100	76.400	Rhinopithecus_roxellana
ENSJJAG00000012033	-	100	94.400	ENSRROG00000040842	-	100	94.805	Rhinopithecus_roxellana
ENSJJAG00000012033	-	96	42.449	YLR022C	-	96	42.449	Saccharomyces_cerevisiae
ENSJJAG00000012033	-	92	93.939	ENSSBOG00000022460	SBDS	99	93.939	Saimiri_boliviensis_boliviensis
ENSJJAG00000012033	-	100	80.400	ENSSHAG00000010263	SBDS	100	80.400	Sarcophilus_harrisii
ENSJJAG00000012033	-	100	83.200	ENSSFOG00015001108	sbds	100	83.200	Scleropages_formosus
ENSJJAG00000012033	-	99	81.526	ENSSMAG00000020506	sbds	100	81.526	Scophthalmus_maximus
ENSJJAG00000012033	-	99	80.972	ENSSDUG00000001528	sbds	99	80.972	Seriola_dumerili
ENSJJAG00000012033	-	99	81.377	ENSSLDG00000003659	sbds	99	81.377	Seriola_lalandi_dorsalis
ENSJJAG00000012033	-	73	94.186	ENSSARG00000001899	-	73	94.186	Sorex_araneus
ENSJJAG00000012033	-	61	95.425	ENSSARG00000013132	-	100	95.425	Sorex_araneus
ENSJJAG00000012033	-	100	83.600	ENSSPUG00000002699	SBDS	100	83.600	Sphenodon_punctatus
ENSJJAG00000012033	-	99	81.377	ENSSPAG00000016419	sbds	99	73.790	Stegastes_partitus
ENSJJAG00000012033	-	100	94.400	ENSSSCG00000007732	SBDS	100	94.400	Sus_scrofa
ENSJJAG00000012033	-	66	87.273	ENSTGUG00000003426	SBDS	99	87.273	Taeniopygia_guttata
ENSJJAG00000012033	-	99	80.723	ENSTRUG00000021443	sbds	100	80.723	Takifugu_rubripes
ENSJJAG00000012033	-	99	80.162	ENSTNIG00000019000	sbds	99	80.162	Tetraodon_nigroviridis
ENSJJAG00000012033	-	83	79.327	ENSTBEG00000001178	SBDS	100	79.327	Tupaia_belangeri
ENSJJAG00000012033	-	100	74.800	ENSTTRG00000003921	SBDS	100	74.800	Tursiops_truncatus
ENSJJAG00000012033	-	100	93.200	ENSUAMG00000001326	SBDS	100	93.200	Ursus_americanus
ENSJJAG00000012033	-	100	93.200	ENSUMAG00000015353	SBDS	100	93.200	Ursus_maritimus
ENSJJAG00000012033	-	100	93.600	ENSVVUG00000016478	SBDS	100	93.600	Vulpes_vulpes
ENSJJAG00000012033	-	100	83.200	ENSXETG00000010093	sbds	100	83.200	Xenopus_tropicalis
ENSJJAG00000012033	-	99	71.486	ENSXCOG00000010639	sbds	100	71.486	Xiphophorus_couchianus
ENSJJAG00000012033	-	99	79.757	ENSXMAG00000006065	sbds	99	79.757	Xiphophorus_maculatus