EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000012067 (Gene tree)
Gene ID: 101611831
Gene Symbol: -
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 2115 bases
Position: chrJH725580.1:4851338-4853452
Accession: 101611831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000007722	Exo_endo_phos	PF03372.23	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000014141	-	1046	XM_004670163	ENSJJAP00000007722	318 (aa)	XP_004670220	UPI00033342FD

Gene Model

Click here to download ENSJJAG00000012067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000012067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000012067	-	94	88.591	ENSJJAG00000020465	-	96	88.591
ENSJJAG00000012067	-	100	89.623	ENSJJAG00000003660	-	100	89.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000012067	-	100	94.025	ENSG00000100823	APEX1	100	94.025	Homo_sapiens
ENSJJAG00000012067	-	88	68.817	ENSAPOG00000017002	apex1	99	64.241	Acanthochromis_polyacanthus
ENSJJAG00000012067	-	100	95.912	ENSAMEG00000005418	APEX1	100	95.912	Ailuropoda_melanoleuca
ENSJJAG00000012067	-	87	69.784	ENSACIG00000010653	apex1	98	68.729	Amphilophus_citrinellus
ENSJJAG00000012067	-	98	64.217	ENSAOCG00000009649	apex1	99	64.856	Amphiprion_ocellaris
ENSJJAG00000012067	-	98	64.217	ENSAPEG00000021453	apex1	99	64.856	Amphiprion_percula
ENSJJAG00000012067	-	86	70.545	ENSATEG00000002883	apex1	97	66.349	Anabas_testudineus
ENSJJAG00000012067	-	100	68.944	ENSACAG00000008099	APEX1	100	68.944	Anolis_carolinensis
ENSJJAG00000012067	-	100	94.025	ENSANAG00000030117	APEX1	100	94.025	Aotus_nancymaae
ENSJJAG00000012067	-	87	70.290	ENSACLG00000018441	apex1	99	65.506	Astatotilapia_calliptera
ENSJJAG00000012067	-	100	64.375	ENSAMXG00000034699	apex1	100	64.375	Astyanax_mexicanus
ENSJJAG00000012067	-	100	94.025	ENSBTAG00000002745	APEX1	100	94.025	Bos_taurus
ENSJJAG00000012067	-	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSJJAG00000012067	-	100	94.654	ENSCJAG00000009726	APEX1	100	94.654	Callithrix_jacchus
ENSJJAG00000012067	-	100	93.082	ENSCAFG00000032033	APEX1	100	93.082	Canis_familiaris
ENSJJAG00000012067	-	100	93.082	ENSCAFG00020014377	-	100	93.082	Canis_lupus_dingo
ENSJJAG00000012067	-	54	89.535	ENSCAFG00020023002	-	96	89.535	Canis_lupus_dingo
ENSJJAG00000012067	-	98	75.000	ENSCHIG00000014537	-	99	75.000	Capra_hircus
ENSJJAG00000012067	-	100	93.396	ENSCHIG00000007298	-	100	93.396	Capra_hircus
ENSJJAG00000012067	-	100	93.711	ENSTSYG00000034813	APEX1	100	93.711	Carlito_syrichta
ENSJJAG00000012067	-	85	87.823	ENSCAPG00000016235	APEX1	91	96.186	Cavia_aperea
ENSJJAG00000012067	-	100	94.025	ENSCPOG00000030909	APEX1	100	94.025	Cavia_porcellus
ENSJJAG00000012067	-	100	81.132	ENSCCAG00000031931	-	100	81.132	Cebus_capucinus
ENSJJAG00000012067	-	100	94.654	ENSCCAG00000033056	-	100	94.654	Cebus_capucinus
ENSJJAG00000012067	-	100	93.711	ENSCATG00000015580	APEX1	100	93.711	Cercocebus_atys
ENSJJAG00000012067	-	100	94.654	ENSCLAG00000001002	APEX1	100	94.654	Chinchilla_lanigera
ENSJJAG00000012067	-	100	93.396	ENSCSAG00000016685	-	100	93.396	Chlorocebus_sabaeus
ENSJJAG00000012067	-	100	93.396	ENSCSAG00000016670	-	100	93.396	Chlorocebus_sabaeus
ENSJJAG00000012067	-	100	69.592	ENSCPBG00000009567	APEX1	100	69.592	Chrysemys_picta_bellii
ENSJJAG00000012067	-	91	54.915	ENSCING00000008137	-	94	54.915	Ciona_intestinalis
ENSJJAG00000012067	-	93	47.267	ENSCSAVG00000007144	-	100	52.124	Ciona_savignyi
ENSJJAG00000012067	-	100	93.711	ENSCANG00000030726	APEX1	100	93.711	Colobus_angolensis_palliatus
ENSJJAG00000012067	-	100	90.566	ENSCGRG00001017046	Apex1	100	90.566	Cricetulus_griseus_chok1gshd
ENSJJAG00000012067	-	100	90.566	ENSCGRG00000008984	Apex1	100	90.566	Cricetulus_griseus_crigri
ENSJJAG00000012067	-	99	63.722	ENSCSEG00000017499	apex1	99	63.722	Cynoglossus_semilaevis
ENSJJAG00000012067	-	88	70.251	ENSCVAG00000022075	apex1	99	65.823	Cyprinodon_variegatus
ENSJJAG00000012067	-	100	64.780	ENSDARG00000045843	apex1	100	64.780	Danio_rerio
ENSJJAG00000012067	-	100	88.994	ENSDNOG00000042234	APEX1	95	88.994	Dasypus_novemcinctus
ENSJJAG00000012067	-	100	94.654	ENSDORG00000001616	Apex1	100	94.654	Dipodomys_ordii
ENSJJAG00000012067	-	100	93.396	ENSETEG00000004855	-	100	93.396	Echinops_telfairi
ENSJJAG00000012067	-	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSJJAG00000012067	-	100	95.597	ENSEASG00005017489	APEX1	74	95.597	Equus_asinus_asinus
ENSJJAG00000012067	-	100	95.597	ENSECAG00000022325	APEX1	82	95.597	Equus_caballus
ENSJJAG00000012067	-	91	93.056	ENSEEUG00000012569	APEX1	100	93.056	Erinaceus_europaeus
ENSJJAG00000012067	-	87	68.953	ENSELUG00000021706	apex1	100	64.375	Esox_lucius
ENSJJAG00000012067	-	100	95.912	ENSFCAG00000030869	APEX1	100	95.912	Felis_catus
ENSJJAG00000012067	-	100	93.711	ENSFDAG00000006120	APEX1	100	93.711	Fukomys_damarensis
ENSJJAG00000012067	-	99	66.456	ENSFHEG00000009031	apex1	83	67.405	Fundulus_heteroclitus
ENSJJAG00000012067	-	99	59.937	ENSGMOG00000007943	apex1	99	59.937	Gadus_morhua
ENSJJAG00000012067	-	88	71.326	ENSGAFG00000005311	apex1	99	66.772	Gambusia_affinis
ENSJJAG00000012067	-	99	64.557	ENSGACG00000019497	apex1	99	68.421	Gasterosteus_aculeatus
ENSJJAG00000012067	-	100	69.279	ENSGAGG00000014999	APEX1	100	69.279	Gopherus_agassizii
ENSJJAG00000012067	-	100	94.340	ENSGGOG00000002128	APEX1	100	94.340	Gorilla_gorilla
ENSJJAG00000012067	-	87	69.928	ENSHBUG00000005894	apex1	99	64.557	Haplochromis_burtoni
ENSJJAG00000012067	-	100	94.340	ENSHGLG00000002848	APEX1	100	94.340	Heterocephalus_glaber_female
ENSJJAG00000012067	-	100	94.340	ENSHGLG00100017878	APEX1	100	94.340	Heterocephalus_glaber_male
ENSJJAG00000012067	-	99	64.151	ENSHCOG00000009961	apex1	99	64.151	Hippocampus_comes
ENSJJAG00000012067	-	100	66.144	ENSIPUG00000005799	apex1	100	66.144	Ictalurus_punctatus
ENSJJAG00000012067	-	100	93.082	ENSSTOG00000010096	APEX1	100	93.082	Ictidomys_tridecemlineatus
ENSJJAG00000012067	-	88	70.251	ENSKMAG00000021171	apex1	99	65.506	Kryptolebias_marmoratus
ENSJJAG00000012067	-	88	67.384	ENSLBEG00000010248	apex1	99	63.898	Labrus_bergylta
ENSJJAG00000012067	-	100	65.312	ENSLACG00000008617	APEX1	100	65.312	Latimeria_chalumnae
ENSJJAG00000012067	-	100	66.770	ENSLOCG00000015516	apex1	99	66.770	Lepisosteus_oculatus
ENSJJAG00000012067	-	100	91.509	ENSLAFG00000021872	APEX1	100	91.509	Loxodonta_africana
ENSJJAG00000012067	-	100	93.711	ENSMFAG00000002565	APEX1	100	93.711	Macaca_fascicularis
ENSJJAG00000012067	-	100	93.711	ENSMMUG00000048039	APEX1	100	93.711	Macaca_mulatta
ENSJJAG00000012067	-	100	93.711	ENSMNEG00000036944	APEX1	100	93.711	Macaca_nemestrina
ENSJJAG00000012067	-	100	93.711	ENSMLEG00000042125	APEX1	100	93.711	Mandrillus_leucophaeus
ENSJJAG00000012067	-	88	70.609	ENSMAMG00000023526	apex1	99	66.139	Mastacembelus_armatus
ENSJJAG00000012067	-	87	70.290	ENSMZEG00005014187	apex1	99	65.506	Maylandia_zebra
ENSJJAG00000012067	-	100	90.881	ENSMAUG00000013994	Apex1	100	90.881	Mesocricetus_auratus
ENSJJAG00000012067	-	100	94.969	ENSMICG00000043554	APEX1	100	94.969	Microcebus_murinus
ENSJJAG00000012067	-	100	92.767	ENSMOCG00000013721	Apex1	100	92.767	Microtus_ochrogaster
ENSJJAG00000012067	-	88	66.429	ENSMMOG00000010031	apex1	97	62.579	Mola_mola
ENSJJAG00000012067	-	100	82.812	ENSMODG00000007125	APEX1	100	84.161	Monodelphis_domestica
ENSJJAG00000012067	-	88	62.724	ENSMALG00000011699	apex1	79	61.775	Monopterus_albus
ENSJJAG00000012067	-	99	92.744	MGP_CAROLIEiJ_G0019209	Apex1	99	92.744	Mus_caroli
ENSJJAG00000012067	-	100	93.396	ENSMUSG00000035960	Apex1	100	93.396	Mus_musculus
ENSJJAG00000012067	-	100	92.767	MGP_PahariEiJ_G0030232	Apex1	100	92.767	Mus_pahari
ENSJJAG00000012067	-	100	93.396	MGP_SPRETEiJ_G0020101	Apex1	100	93.396	Mus_spretus
ENSJJAG00000012067	-	100	94.375	ENSMLUG00000028957	APEX1	100	94.375	Myotis_lucifugus
ENSJJAG00000012067	-	100	92.767	ENSNGAG00000002725	-	100	92.767	Nannospalax_galili
ENSJJAG00000012067	-	100	69.182	ENSNGAG00000021748	-	99	69.182	Nannospalax_galili
ENSJJAG00000012067	-	87	69.928	ENSNBRG00000005334	apex1	91	65.190	Neolamprologus_brichardi
ENSJJAG00000012067	-	100	94.025	ENSNLEG00000010839	APEX1	100	94.025	Nomascus_leucogenys
ENSJJAG00000012067	-	100	85.535	ENSMEUG00000014519	APEX1	100	85.535	Notamacropus_eugenii
ENSJJAG00000012067	-	100	92.453	ENSOPRG00000014029	APEX1	100	92.453	Ochotona_princeps
ENSJJAG00000012067	-	100	71.605	ENSODEG00000006583	-	100	71.605	Octodon_degus
ENSJJAG00000012067	-	97	75.081	ENSODEG00000004777	-	99	75.081	Octodon_degus
ENSJJAG00000012067	-	100	95.283	ENSODEG00000001703	-	100	95.283	Octodon_degus
ENSJJAG00000012067	-	87	70.504	ENSONIG00000012089	apex1	99	65.823	Oreochromis_niloticus
ENSJJAG00000012067	-	90	82.105	ENSOANG00000008836	APEX1	80	78.086	Ornithorhynchus_anatinus
ENSJJAG00000012067	-	100	93.082	ENSOCUG00000005022	APEX1	100	93.082	Oryctolagus_cuniculus
ENSJJAG00000012067	-	99	66.038	ENSORLG00000012378	apex1	99	66.038	Oryzias_latipes
ENSJJAG00000012067	-	99	66.038	ENSORLG00020021371	apex1	99	66.038	Oryzias_latipes_hni
ENSJJAG00000012067	-	99	66.038	ENSORLG00015020089	apex1	99	66.038	Oryzias_latipes_hsok
ENSJJAG00000012067	-	99	66.038	ENSOMEG00000018876	apex1	99	66.038	Oryzias_melastigma
ENSJJAG00000012067	-	98	83.654	ENSOGAG00000029355	-	100	83.654	Otolemur_garnettii
ENSJJAG00000012067	-	100	94.025	ENSOGAG00000013335	-	100	94.025	Otolemur_garnettii
ENSJJAG00000012067	-	100	92.453	ENSOARG00000019740	-	100	92.453	Ovis_aries
ENSJJAG00000012067	-	97	89.610	ENSOARG00000001876	-	100	89.610	Ovis_aries
ENSJJAG00000012067	-	99	78.797	ENSOARG00000014424	-	100	78.797	Ovis_aries
ENSJJAG00000012067	-	100	94.340	ENSPPAG00000038760	APEX1	100	94.340	Pan_paniscus
ENSJJAG00000012067	-	100	95.597	ENSPPRG00000011794	APEX1	100	95.597	Panthera_pardus
ENSJJAG00000012067	-	100	95.912	ENSPTIG00000014829	APEX1	100	95.912	Panthera_tigris_altaica
ENSJJAG00000012067	-	100	94.340	ENSPTRG00000006093	APEX1	100	94.340	Pan_troglodytes
ENSJJAG00000012067	-	100	93.711	ENSPANG00000022757	APEX1	100	93.711	Papio_anubis
ENSJJAG00000012067	-	87	68.231	ENSPKIG00000003504	apex1	100	63.551	Paramormyrops_kingsleyae
ENSJJAG00000012067	-	76	65.432	ENSPMGG00000016596	apex1	73	65.432	Periophthalmus_magnuspinnatus
ENSJJAG00000012067	-	100	94.025	ENSPEMG00000019097	Apex1	100	94.025	Peromyscus_maniculatus_bairdii
ENSJJAG00000012067	-	94	64.000	ENSPMAG00000007275	-	99	64.000	Petromyzon_marinus
ENSJJAG00000012067	-	100	83.072	ENSPCIG00000023274	APEX1	100	84.735	Phascolarctos_cinereus
ENSJJAG00000012067	-	88	71.685	ENSPFOG00000004178	apex1	99	67.089	Poecilia_formosa
ENSJJAG00000012067	-	88	71.326	ENSPLAG00000012779	apex1	99	67.089	Poecilia_latipinna
ENSJJAG00000012067	-	88	71.685	ENSPMEG00000019623	apex1	99	67.089	Poecilia_mexicana
ENSJJAG00000012067	-	88	70.968	ENSPREG00000014298	apex1	99	66.454	Poecilia_reticulata
ENSJJAG00000012067	-	100	94.025	ENSPPYG00000005565	APEX1	100	94.025	Pongo_abelii
ENSJJAG00000012067	-	100	89.623	ENSPCAG00000010376	APEX1	100	89.623	Procavia_capensis
ENSJJAG00000012067	-	100	94.969	ENSPCOG00000021564	APEX1	100	94.969	Propithecus_coquereli
ENSJJAG00000012067	-	100	94.375	ENSPVAG00000010736	APEX1	100	94.375	Pteropus_vampyrus
ENSJJAG00000012067	-	87	70.290	ENSPNYG00000023940	apex1	99	65.506	Pundamilia_nyererei
ENSJJAG00000012067	-	93	64.865	ENSPNAG00000020897	apex1	96	64.746	Pygocentrus_nattereri
ENSJJAG00000012067	-	100	93.082	ENSRNOG00000009663	Apex1	100	93.082	Rattus_norvegicus
ENSJJAG00000012067	-	100	93.711	ENSRBIG00000038325	APEX1	99	93.711	Rhinopithecus_bieti
ENSJJAG00000012067	-	100	94.340	ENSSBOG00000018921	-	100	94.340	Saimiri_boliviensis_boliviensis
ENSJJAG00000012067	-	100	80.189	ENSSBOG00000031372	-	100	80.189	Saimiri_boliviensis_boliviensis
ENSJJAG00000012067	-	100	81.173	ENSSHAG00000013524	APEX1	100	82.515	Sarcophilus_harrisii
ENSJJAG00000012067	-	87	66.426	ENSSFOG00015001948	apex1	100	61.635	Scleropages_formosus
ENSJJAG00000012067	-	87	68.345	ENSSMAG00000013348	apex1	99	64.353	Scophthalmus_maximus
ENSJJAG00000012067	-	88	68.459	ENSSDUG00000016377	apex1	99	64.241	Seriola_dumerili
ENSJJAG00000012067	-	88	69.176	ENSSLDG00000023005	apex1	99	64.873	Seriola_lalandi_dorsalis
ENSJJAG00000012067	-	90	72.982	ENSSPUG00000000531	APEX1	95	72.982	Sphenodon_punctatus
ENSJJAG00000012067	-	98	64.856	ENSSPAG00000000458	apex1	99	64.856	Stegastes_partitus
ENSJJAG00000012067	-	100	94.969	ENSSSCG00000040060	-	100	94.969	Sus_scrofa
ENSJJAG00000012067	-	95	56.634	ENSSSCG00000039705	-	99	57.947	Sus_scrofa
ENSJJAG00000012067	-	74	58.898	ENSTGUG00000014378	APEX1	100	58.898	Taeniopygia_guttata
ENSJJAG00000012067	-	87	67.266	ENSTRUG00000004268	apex1	95	62.939	Takifugu_rubripes
ENSJJAG00000012067	-	98	63.259	ENSTNIG00000005778	apex1	99	63.259	Tetraodon_nigroviridis
ENSJJAG00000012067	-	100	90.566	ENSTBEG00000006405	APEX1	100	90.566	Tupaia_belangeri
ENSJJAG00000012067	-	74	94.068	ENSTTRG00000007860	APEX1	100	94.068	Tursiops_truncatus
ENSJJAG00000012067	-	100	95.597	ENSUAMG00000010457	APEX1	100	95.597	Ursus_americanus
ENSJJAG00000012067	-	100	95.597	ENSUMAG00000009178	APEX1	100	95.597	Ursus_maritimus
ENSJJAG00000012067	-	74	88.983	ENSVPAG00000005083	APEX1	100	88.983	Vicugna_pacos
ENSJJAG00000012067	-	100	92.453	ENSVVUG00000009010	APEX1	100	92.453	Vulpes_vulpes
ENSJJAG00000012067	-	100	65.421	ENSXETG00000024773	apex1	100	65.421	Xenopus_tropicalis
ENSJJAG00000012067	-	88	71.326	ENSXCOG00000015233	apex1	99	67.093	Xiphophorus_couchianus
ENSJJAG00000012067	-	88	71.326	ENSXMAG00000006195	apex1	99	67.093	Xiphophorus_maculatus