EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000012296 (Gene tree)
Gene ID: 101616550
Gene Symbol: Cnot6
Alias: A230103N10Rik
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 43063 bases
Position: chrJH725529.1:7740588-7783650
Accession: 101616550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000008042	Exo_endo_phos	PF03372.23	3.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000014464	-	2167	XM_004666601	ENSJJAP00000008042	557 (aa)	XP_004666658	UPI0003333FCA

Gene Model

Click here to download ENSJJAG00000012296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000012296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000012296	Cnot6	100	77.020	ENSJJAG00000020583	Cnot6l	99	77.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000012296	Cnot6	100	95.512	ENSG00000113300	CNOT6	100	95.512	Homo_sapiens
ENSJJAG00000012296	Cnot6	100	86.225	ENSAPOG00000009994	cnot6b	100	86.225	Acanthochromis_polyacanthus
ENSJJAG00000012296	Cnot6	100	95.707	ENSAMEG00000000949	CNOT6	99	95.707	Ailuropoda_melanoleuca
ENSJJAG00000012296	Cnot6	100	84.973	ENSACIG00000016566	cnot6b	100	84.973	Amphilophus_citrinellus
ENSJJAG00000012296	Cnot6	100	86.225	ENSAOCG00000006893	cnot6b	100	86.225	Amphiprion_ocellaris
ENSJJAG00000012296	Cnot6	100	86.225	ENSAPEG00000016949	cnot6b	100	86.225	Amphiprion_percula
ENSJJAG00000012296	Cnot6	100	84.436	ENSATEG00000007862	cnot6b	100	84.436	Anabas_testudineus
ENSJJAG00000012296	Cnot6	100	94.434	ENSAPLG00000012715	CNOT6	99	94.434	Anas_platyrhynchos
ENSJJAG00000012296	Cnot6	100	91.921	ENSACAG00000016548	CNOT6	100	91.921	Anolis_carolinensis
ENSJJAG00000012296	Cnot6	100	95.871	ENSANAG00000030436	CNOT6	96	95.871	Aotus_nancymaae
ENSJJAG00000012296	Cnot6	100	84.079	ENSACLG00000008279	cnot6b	100	84.973	Astatotilapia_calliptera
ENSJJAG00000012296	Cnot6	100	85.842	ENSAMXG00000019140	cnot6a	100	85.842	Astyanax_mexicanus
ENSJJAG00000012296	Cnot6	100	83.871	ENSAMXG00000034694	cnot6b	100	83.871	Astyanax_mexicanus
ENSJJAG00000012296	Cnot6	100	95.512	ENSBTAG00000017362	CNOT6	100	95.512	Bos_taurus
ENSJJAG00000012296	Cnot6	100	95.691	ENSCJAG00000009795	CNOT6	100	95.691	Callithrix_jacchus
ENSJJAG00000012296	Cnot6	100	95.871	ENSCAFG00000000464	CNOT6	100	95.871	Canis_familiaris
ENSJJAG00000012296	Cnot6	100	95.871	ENSCAFG00020002441	CNOT6	100	95.871	Canis_lupus_dingo
ENSJJAG00000012296	Cnot6	100	95.512	ENSCHIG00000019100	CNOT6	100	95.512	Capra_hircus
ENSJJAG00000012296	Cnot6	100	94.255	ENSTSYG00000003982	CNOT6	100	94.255	Carlito_syrichta
ENSJJAG00000012296	Cnot6	100	91.562	ENSCPOG00000035657	CNOT6	100	91.562	Cavia_porcellus
ENSJJAG00000012296	Cnot6	100	91.382	ENSCCAG00000033670	CNOT6	100	91.382	Cebus_capucinus
ENSJJAG00000012296	Cnot6	100	95.512	ENSCATG00000042014	CNOT6	100	95.512	Cercocebus_atys
ENSJJAG00000012296	Cnot6	100	94.973	ENSCLAG00000010489	CNOT6	100	94.973	Chinchilla_lanigera
ENSJJAG00000012296	Cnot6	100	95.512	ENSCSAG00000008165	CNOT6	100	95.512	Chlorocebus_sabaeus
ENSJJAG00000012296	Cnot6	100	94.614	ENSCHOG00000009680	CNOT6	100	94.614	Choloepus_hoffmanni
ENSJJAG00000012296	Cnot6	100	94.075	ENSCPBG00000008908	CNOT6	100	94.075	Chrysemys_picta_bellii
ENSJJAG00000012296	Cnot6	100	95.332	ENSCANG00000026756	CNOT6	100	95.332	Colobus_angolensis_palliatus
ENSJJAG00000012296	Cnot6	100	95.153	ENSCGRG00001011452	Cnot6	100	95.153	Cricetulus_griseus_chok1gshd
ENSJJAG00000012296	Cnot6	100	93.537	ENSCGRG00000010407	Cnot6	100	93.537	Cricetulus_griseus_crigri
ENSJJAG00000012296	Cnot6	100	85.331	ENSCSEG00000010939	cnot6b	100	85.331	Cynoglossus_semilaevis
ENSJJAG00000012296	Cnot6	100	84.946	ENSCVAG00000010538	cnot6b	100	84.946	Cyprinodon_variegatus
ENSJJAG00000012296	Cnot6	100	82.975	ENSDARG00000101072	cnot6b	100	82.975	Danio_rerio
ENSJJAG00000012296	Cnot6	100	85.305	ENSDARG00000008255	cnot6a	100	85.305	Danio_rerio
ENSJJAG00000012296	Cnot6	100	95.691	ENSDNOG00000041644	CNOT6	100	95.691	Dasypus_novemcinctus
ENSJJAG00000012296	Cnot6	100	85.305	ENSDORG00000001708	Cnot6	100	85.305	Dipodomys_ordii
ENSJJAG00000012296	Cnot6	100	76.386	ENSETEG00000006975	CNOT6	100	76.386	Echinops_telfairi
ENSJJAG00000012296	Cnot6	100	95.332	ENSEASG00005012794	-	100	95.332	Equus_asinus_asinus
ENSJJAG00000012296	Cnot6	90	90.000	ENSEASG00005012957	-	99	90.000	Equus_asinus_asinus
ENSJJAG00000012296	Cnot6	100	89.048	ENSECAG00000012704	-	99	89.048	Equus_caballus
ENSJJAG00000012296	Cnot6	100	96.050	ENSECAG00000019325	CNOT6	100	96.050	Equus_caballus
ENSJJAG00000012296	Cnot6	100	94.794	ENSEEUG00000015382	CNOT6	100	94.794	Erinaceus_europaeus
ENSJJAG00000012296	Cnot6	100	82.187	ENSELUG00000015981	cnot6b	99	82.187	Esox_lucius
ENSJJAG00000012296	Cnot6	100	81.183	ENSELUG00000024580	cnot6a	100	81.183	Esox_lucius
ENSJJAG00000012296	Cnot6	100	96.230	ENSFCAG00000001881	CNOT6	100	96.230	Felis_catus
ENSJJAG00000012296	Cnot6	100	94.614	ENSFALG00000007699	CNOT6	100	94.614	Ficedula_albicollis
ENSJJAG00000012296	Cnot6	100	94.614	ENSFDAG00000001999	CNOT6	100	94.614	Fukomys_damarensis
ENSJJAG00000012296	Cnot6	68	84.326	ENSFHEG00000013756	cnot6b	94	89.744	Fundulus_heteroclitus
ENSJJAG00000012296	Cnot6	95	83.932	ENSGMOG00000009767	cnot6b	99	83.932	Gadus_morhua
ENSJJAG00000012296	Cnot6	100	94.614	ENSGALG00000034316	CNOT6	100	94.614	Gallus_gallus
ENSJJAG00000012296	Cnot6	100	85.125	ENSGAFG00000008525	cnot6b	100	85.125	Gambusia_affinis
ENSJJAG00000012296	Cnot6	95	82.420	ENSGACG00000018046	cnot6b	99	82.420	Gasterosteus_aculeatus
ENSJJAG00000012296	Cnot6	100	78.276	ENSGAGG00000012176	CNOT6	100	78.276	Gopherus_agassizii
ENSJJAG00000012296	Cnot6	100	95.512	ENSGGOG00000003675	CNOT6	100	95.512	Gorilla_gorilla
ENSJJAG00000012296	Cnot6	100	84.258	ENSHBUG00000002819	cnot6b	100	85.152	Haplochromis_burtoni
ENSJJAG00000012296	Cnot6	100	95.153	ENSHGLG00000017756	CNOT6	100	95.153	Heterocephalus_glaber_female
ENSJJAG00000012296	Cnot6	100	95.153	ENSHGLG00100005747	CNOT6	100	95.153	Heterocephalus_glaber_male
ENSJJAG00000012296	Cnot6	100	83.184	ENSHCOG00000016176	cnot6b	100	84.079	Hippocampus_comes
ENSJJAG00000012296	Cnot6	100	83.513	ENSIPUG00000017482	cnot6b	100	83.513	Ictalurus_punctatus
ENSJJAG00000012296	Cnot6	100	84.409	ENSIPUG00000019831	cnot6a	100	84.409	Ictalurus_punctatus
ENSJJAG00000012296	Cnot6	100	95.871	ENSSTOG00000002803	CNOT6	100	95.871	Ictidomys_tridecemlineatus
ENSJJAG00000012296	Cnot6	100	85.842	ENSKMAG00000004640	cnot6b	100	85.842	Kryptolebias_marmoratus
ENSJJAG00000012296	Cnot6	100	83.542	ENSLBEG00000027917	cnot6b	100	84.436	Labrus_bergylta
ENSJJAG00000012296	Cnot6	100	88.710	ENSLOCG00000010102	cnot6b	99	88.710	Lepisosteus_oculatus
ENSJJAG00000012296	Cnot6	100	95.871	ENSLAFG00000016742	CNOT6	100	95.871	Loxodonta_africana
ENSJJAG00000012296	Cnot6	100	95.512	ENSMFAG00000030867	CNOT6	100	95.512	Macaca_fascicularis
ENSJJAG00000012296	Cnot6	100	95.512	ENSMMUG00000018690	CNOT6	100	95.512	Macaca_mulatta
ENSJJAG00000012296	Cnot6	100	95.512	ENSMNEG00000038565	CNOT6	100	95.512	Macaca_nemestrina
ENSJJAG00000012296	Cnot6	100	95.512	ENSMLEG00000010555	CNOT6	100	95.512	Mandrillus_leucophaeus
ENSJJAG00000012296	Cnot6	100	86.404	ENSMAMG00000007515	cnot6b	100	86.404	Mastacembelus_armatus
ENSJJAG00000012296	Cnot6	100	84.079	ENSMZEG00005012899	cnot6b	100	84.973	Maylandia_zebra
ENSJJAG00000012296	Cnot6	100	96.230	ENSMAUG00000019798	Cnot6	100	96.230	Mesocricetus_auratus
ENSJJAG00000012296	Cnot6	100	93.716	ENSMICG00000013018	-	100	93.716	Microcebus_murinus
ENSJJAG00000012296	Cnot6	98	85.110	ENSMICG00000028378	-	99	85.110	Microcebus_murinus
ENSJJAG00000012296	Cnot6	100	96.050	ENSMOCG00000021662	Cnot6	100	96.050	Microtus_ochrogaster
ENSJJAG00000012296	Cnot6	100	83.513	ENSMMOG00000003227	cnot6b	100	83.513	Mola_mola
ENSJJAG00000012296	Cnot6	100	94.434	ENSMODG00000003979	CNOT6	100	94.434	Monodelphis_domestica
ENSJJAG00000012296	Cnot6	100	86.047	ENSMALG00000014251	cnot6b	100	86.047	Monopterus_albus
ENSJJAG00000012296	Cnot6	100	96.230	MGP_CAROLIEiJ_G0016277	Cnot6	100	96.230	Mus_caroli
ENSJJAG00000012296	Cnot6	100	96.230	ENSMUSG00000020362	Cnot6	100	96.230	Mus_musculus
ENSJJAG00000012296	Cnot6	100	96.230	MGP_PahariEiJ_G0017413	Cnot6	100	96.230	Mus_pahari
ENSJJAG00000012296	Cnot6	100	96.050	MGP_SPRETEiJ_G0017122	Cnot6	100	96.050	Mus_spretus
ENSJJAG00000012296	Cnot6	100	95.691	ENSMPUG00000000587	CNOT6	96	95.691	Mustela_putorius_furo
ENSJJAG00000012296	Cnot6	100	93.772	ENSMLUG00000010257	CNOT6	100	93.772	Myotis_lucifugus
ENSJJAG00000012296	Cnot6	100	94.973	ENSNGAG00000008269	Cnot6	100	94.973	Nannospalax_galili
ENSJJAG00000012296	Cnot6	100	84.258	ENSNBRG00000010798	cnot6b	100	85.152	Neolamprologus_brichardi
ENSJJAG00000012296	Cnot6	100	94.434	ENSNLEG00000002322	CNOT6	100	94.434	Nomascus_leucogenys
ENSJJAG00000012296	Cnot6	81	95.327	ENSMEUG00000000025	CNOT6	81	95.327	Notamacropus_eugenii
ENSJJAG00000012296	Cnot6	88	93.795	ENSOPRG00000008244	-	88	93.795	Ochotona_princeps
ENSJJAG00000012296	Cnot6	100	94.075	ENSODEG00000007041	CNOT6	100	94.075	Octodon_degus
ENSJJAG00000012296	Cnot6	75	83.924	ENSONIG00000013027	cnot6b	99	83.924	Oreochromis_niloticus
ENSJJAG00000012296	Cnot6	100	93.537	ENSOANG00000010226	CNOT6	100	93.537	Ornithorhynchus_anatinus
ENSJJAG00000012296	Cnot6	100	94.812	ENSOCUG00000011083	CNOT6	100	94.812	Oryctolagus_cuniculus
ENSJJAG00000012296	Cnot6	100	84.794	ENSORLG00000005059	cnot6b	100	84.794	Oryzias_latipes
ENSJJAG00000012296	Cnot6	100	84.794	ENSORLG00020012784	cnot6b	100	84.794	Oryzias_latipes_hni
ENSJJAG00000012296	Cnot6	94	84.130	ENSORLG00015022658	cnot6b	98	84.130	Oryzias_latipes_hsok
ENSJJAG00000012296	Cnot6	100	84.973	ENSOMEG00000005295	cnot6b	100	84.973	Oryzias_melastigma
ENSJJAG00000012296	Cnot6	94	95.420	ENSOGAG00000032470	CNOT6	100	95.420	Otolemur_garnettii
ENSJJAG00000012296	Cnot6	97	95.387	ENSOARG00000001003	CNOT6	100	95.387	Ovis_aries
ENSJJAG00000012296	Cnot6	100	95.512	ENSPPAG00000032253	CNOT6	100	95.512	Pan_paniscus
ENSJJAG00000012296	Cnot6	100	96.050	ENSPPRG00000011912	CNOT6	100	96.050	Panthera_pardus
ENSJJAG00000012296	Cnot6	100	96.050	ENSPTIG00000016794	CNOT6	100	96.050	Panthera_tigris_altaica
ENSJJAG00000012296	Cnot6	100	95.512	ENSPTRG00000017636	CNOT6	100	95.512	Pan_troglodytes
ENSJJAG00000012296	Cnot6	100	95.512	ENSPANG00000016191	CNOT6	100	95.512	Papio_anubis
ENSJJAG00000012296	Cnot6	100	85.305	ENSPKIG00000021368	cnot6b	100	85.305	Paramormyrops_kingsleyae
ENSJJAG00000012296	Cnot6	98	94.301	ENSPSIG00000017307	CNOT6	100	94.301	Pelodiscus_sinensis
ENSJJAG00000012296	Cnot6	100	84.973	ENSPMGG00000011238	cnot6b	100	84.973	Periophthalmus_magnuspinnatus
ENSJJAG00000012296	Cnot6	100	94.973	ENSPEMG00000000627	Cnot6	100	94.973	Peromyscus_maniculatus_bairdii
ENSJJAG00000012296	Cnot6	100	94.075	ENSPCIG00000020319	CNOT6	99	94.075	Phascolarctos_cinereus
ENSJJAG00000012296	Cnot6	100	84.946	ENSPFOG00000006291	cnot6b	100	84.946	Poecilia_formosa
ENSJJAG00000012296	Cnot6	100	81.541	ENSPLAG00000008266	cnot6b	100	81.541	Poecilia_latipinna
ENSJJAG00000012296	Cnot6	100	85.125	ENSPMEG00000009091	cnot6b	100	85.125	Poecilia_mexicana
ENSJJAG00000012296	Cnot6	100	84.050	ENSPREG00000003713	cnot6b	100	84.050	Poecilia_reticulata
ENSJJAG00000012296	Cnot6	100	95.512	ENSPPYG00000016137	CNOT6	100	95.512	Pongo_abelii
ENSJJAG00000012296	Cnot6	59	95.489	ENSPCAG00000005599	-	59	95.489	Procavia_capensis
ENSJJAG00000012296	Cnot6	100	89.767	ENSPCOG00000017359	CNOT6	100	90.485	Propithecus_coquereli
ENSJJAG00000012296	Cnot6	100	90.844	ENSPVAG00000003069	CNOT6	100	90.844	Pteropus_vampyrus
ENSJJAG00000012296	Cnot6	100	83.900	ENSPNYG00000000321	cnot6b	100	84.794	Pundamilia_nyererei
ENSJJAG00000012296	Cnot6	100	85.842	ENSPNAG00000029586	cnot6a	100	85.842	Pygocentrus_nattereri
ENSJJAG00000012296	Cnot6	100	84.409	ENSPNAG00000028816	cnot6b	100	84.409	Pygocentrus_nattereri
ENSJJAG00000012296	Cnot6	100	95.153	ENSRNOG00000054891	Cnot6	100	95.153	Rattus_norvegicus
ENSJJAG00000012296	Cnot6	100	95.332	ENSRBIG00000004309	CNOT6	100	95.332	Rhinopithecus_bieti
ENSJJAG00000012296	Cnot6	100	95.332	ENSRROG00000035378	CNOT6	100	95.887	Rhinopithecus_roxellana
ENSJJAG00000012296	Cnot6	100	95.691	ENSSBOG00000030494	CNOT6	100	95.691	Saimiri_boliviensis_boliviensis
ENSJJAG00000012296	Cnot6	100	94.434	ENSSHAG00000017436	CNOT6	100	94.434	Sarcophilus_harrisii
ENSJJAG00000012296	Cnot6	100	85.305	ENSSFOG00015022383	cnot6a	96	85.305	Scleropages_formosus
ENSJJAG00000012296	Cnot6	100	86.918	ENSSFOG00015015133	CNOT6	100	86.918	Scleropages_formosus
ENSJJAG00000012296	Cnot6	100	84.258	ENSSMAG00000003084	cnot6b	100	84.258	Scophthalmus_maximus
ENSJJAG00000012296	Cnot6	100	85.868	ENSSDUG00000004151	cnot6b	100	85.868	Seriola_dumerili
ENSJJAG00000012296	Cnot6	100	85.152	ENSSLDG00000004448	cnot6b	100	86.047	Seriola_lalandi_dorsalis
ENSJJAG00000012296	Cnot6	64	75.140	ENSSARG00000012650	-	100	75.140	Sorex_araneus
ENSJJAG00000012296	Cnot6	100	93.716	ENSSPUG00000007893	CNOT6	100	93.716	Sphenodon_punctatus
ENSJJAG00000012296	Cnot6	100	86.047	ENSSPAG00000000149	cnot6b	100	86.047	Stegastes_partitus
ENSJJAG00000012296	Cnot6	100	95.332	ENSSSCG00000014009	CNOT6	100	95.887	Sus_scrofa
ENSJJAG00000012296	Cnot6	100	94.255	ENSTGUG00000001119	CNOT6	100	94.255	Taeniopygia_guttata
ENSJJAG00000012296	Cnot6	100	83.124	ENSTRUG00000002818	cnot6b	100	83.124	Takifugu_rubripes
ENSJJAG00000012296	Cnot6	100	83.483	ENSTNIG00000004443	cnot6b	99	83.483	Tetraodon_nigroviridis
ENSJJAG00000012296	Cnot6	87	66.530	ENSTBEG00000017094	-	100	66.530	Tupaia_belangeri
ENSJJAG00000012296	Cnot6	100	95.512	ENSTTRG00000009363	CNOT6	100	95.512	Tursiops_truncatus
ENSJJAG00000012296	Cnot6	77	96.270	ENSUAMG00000004579	CNOT6	99	85.657	Ursus_americanus
ENSJJAG00000012296	Cnot6	100	91.438	ENSUMAG00000024577	CNOT6	100	91.438	Ursus_maritimus
ENSJJAG00000012296	Cnot6	83	94.626	ENSVPAG00000003593	CNOT6	83	94.626	Vicugna_pacos
ENSJJAG00000012296	Cnot6	100	95.871	ENSVVUG00000026940	CNOT6	100	95.871	Vulpes_vulpes
ENSJJAG00000012296	Cnot6	100	81.900	ENSXCOG00000003360	cnot6b	100	81.900	Xiphophorus_couchianus
ENSJJAG00000012296	Cnot6	100	85.125	ENSXMAG00000008730	cnot6b	100	85.125	Xiphophorus_maculatus